Publications

Kaur, H., Shaker, K., Heinzel, N., Ralph, J., Galis, I. & Baldwin, I.T. "Environmental stresses of field growth allow cinnamyl alcohol dehydrogenase-deficient Nicotiana attenuata plants to compensate for their structural deficiencies." Plant Physiology 159, 1545–1570+ (2012). [DOI: 10.1104/pp.112.196717]

Kim, J. & Reed, J.L. "RELATCH: relative optimality in metabolic networks explains robust metabolic and regulatory responses to perturbations." Genome Biology 13,9, R78+ (2012). [DOI: 10.1186/gb-2012-13-9-r78]

Kim, S., Dale, B.E. & Ong, R.G. "An alternative approach to indirect land use change: allocating greenhouse gas effects among different uses of land." Biomass and Bioenergy 46, 447–452+ (2012). [DOI: 10.1016/j.biombioe.2012.07.015]

Kim, S.-J. & Brandizzi, F. "News and views into the SNARE complexity in Arabidopsis." Frontiers in Plant Science 3, 28+ (2012). [DOI: 10.3389/fpls.2012.00028]

Kim, W.-C., Ko, J.-H. & Han, K.-H. "Identification of a cis-acting regulatory motif recognized by MYB46, a master transcriptional regulator of secondary wall biosynthesis." Plant Molecular Biology 78,4-5, 489–501+ (2012). [DOI: 10.1007/s11103-012-9880-7]

Ko, J.-H., Kim, H.-T., Hwang, I. & Han, K.-H. "Tissue-type-specific transcriptome analysis identifies developing xylem-specific promoters in poplar." Plant Biotechnology Journal 10,5, 587–596+ (2012). [DOI: 10.1111/j.1467-7652.2012.00690.x]

Ko, J.-H., Kim, W.-C., Kim, J.-Y., Ahn, S.-J. & Han, K.-H. "MYB46-mediated transcriptional regulation of secondary wall biosynthesis." Molecular Plant 5,5, 961–963+ (2012). [DOI: 10.1093/mp/sss076]

Kontur, W.S., Noguera, D.D. & Donohue, T.J. "Maximizing reductant flow into microbial H2 production." Current Opinion in Biotechnology 23,3, 382–389+ (2012). [DOI: 10.1016/j.copbio.2011.10.003,]

Landis, D.A., Gardiner, M.M. & Tompkins, J. "Using native plant species to diversify agriculture." in Biodiversity and Insect Pests: Key Issues for Sustainable Management. 276–292+ (John Wiley & Sons, Ltd, 2012). [DOI: 10.1002/9781118231838.ch17]

Lau, M.W., Bals, B.D., Chundawat, S.P.S., Jin, M., Gunawan, C., Balan, V., Jones, D. & Dale, B.E. "An integrated paradigm for cellulosic biorefineries: utilization of lignocellulosic biomass as self-sufficient feedstocks for fuel, food precursors and saccharolytic enzyme production." Energy & Environmental Science 5,5, 7100–7110+ (2012). [DOI: 10.1039/C2EE03596K]

Lennen, R.M. & Pfleger, B.F. "Engineering Escherichia coli to synthesize free fatty acids." Trends in Biotechnology 30,12, 659–67+ (2012). [DOI: 10.1016/j.tibtech.2012.09.006]

Li, M., Foster, C., Pu, Y., Holmes, D., Saffron, C., Ragauskas, A. & Hodge, D. "Structural characterization of alkaline hydrogen peroxide pretreated grasses exhibiting diverse lignin phenotypes." Biotechnology for Biofuels 5, 38+ (2012). [DOI: 10.1186/1754-6834-5-38]

Liang, C., Duncan, D.S., Balser, T.C., Tiedje, J.M. & Jackson, R.D. "Soil microbial residue storage linked to soil legacy under biofuel cropping systems in southern Wisconsin, USA." Soil Biology and Biochemistry 57, 939–942+ (2012). [DOI: 10.1016/j.soilbio.2012.09.006]

Liang, C., Jesus, E. da C., Duncan, D.S., Jackson, R.D., Tiedje, J.M. & Balser, T.C. "Soil microbial communities under model biofuel cropping systems in southern Wisconsin, USA: impact of crop species and soil properties." Applied Soil Ecology 54, 24–31+ (2012). [DOI: 10.1016/j.apsoil.2011.11.015]

Liang, C., Read, H.W. & Balser, T.C. "GC-based detection of aldononitrile acetate derivatized glucosamine and muramic acid for microbial residue determination in soil." Journal of Visualized Experiments e3767+ (2012). [DOI: 10.3791/3767]

Liepman, A.H. & Cavalier, D.M. "The CELLULOSE SYNTHASE-LIKE A and CELLULOSE SYNTHASE-LIKE C families: recent advances and future perspectives." Frontiers in Plant Science 3, 109+ (2012). [DOI: 10.3389/fpls.2012.00109]

Long, T.M., Su, Y.-K.K., Headman, J., Higbee, A., Willis, L.B. & Jeffries, T.W. "Cofermentation of glucose, xylose, and cellobiose by the beetle-associated yeast, Spathaspora passalidarum." Applied and Environmental Microbiology 78,16, 5492–54500+ (2012). [DOI: 10.1128/AEM.00374-12]

Lu, F., Wei, L., Azarpira, A. & Ralph, J. "Rapid syntheses of dehydrodiferulates via biomimetic radical coupling reactions of ethyl ferulate." Journal of Agricultural and Food Chemistry 60, 8272–8277+ (2012). [DOI: 10.1021/jf302140k]

Mansfield, S.D., Kim, H., Lu, F. & Ralph, J. "Whole plant cell wall characterization using solution-state 2D NMR." Nature Protocols 7, 1579–1589+ (2012). [DOI: 10.1038/nprot.2012.064]

Masukawa, H., Kitashima, M., Inoue, K., Sakurai, H. & Hausinger, R.P. "Genetic engineering of cyanobacteria to enhance biohydrogen production from sunlight and water." Ambio 41,(Supplement 2), 169–173+ (2012). [DOI: 10.1007/s13280-012-0275-4]

Masukawa, H., Mochimaru, M. & Takaichi, S. "Characterization of carotenogenesis genes in the cyanobacterium Anabaena sp. PCC 7120." in Methods in Molecular Biology. vols. 892 297–306+ (Humana Press, 2012). [DOI: 10.1007/978-1-61779-879-5_18]

McLaughlin, L.S., Haft, R.J. & Forest, K.T. "Structural insights into the Type II secretion nanomachine." Current Opinion in Structural Biology 22,2, 208–16+ (2012). [DOI: 10.1016/j.sbi.2012.02.005]

Mead, D., Lucas, S., Copeland, A., Lapidus, A., Cheng, J.-F., Bruce, D.C., Goodwin, L.A., Pitluck, S., Chertkov, O., Zhang, X., et al. "Complete genome sequence of Paenibacillus strain Y4.12MC10, a novel Paenibacillus lautus strained isolated from Obsidian Hot Spring in Yellowstone National Park." Standards in Genomic Science 6, 366–385+ (2012). [DOI: 10.4056/sigs.2605792]

Meehan, T.D., Werling, B.P., Landis, D.A. & Gratton, C. "Pest-suppression potential of Midwestern landscapes under contrasting bioenergy scenarios." PLOS ONE 7,7, e41728+ (2012). [DOI: 10.1371/journal.pone.0041728.g001]

Miao, R., Hennessy, D.A. & Babcock, B.A. "Investment in cellulosic biofuel refineries: Do waivable biofuel mandates matter?" American Journal of Agricultural Economics 9,3, 750–762+ (2012). [DOI: 10.1093/ajae/aar142]