| Year | Publication | Keywords |
|---|---|---|
| 2025 | Adhikari, B., Verchot, J., Brandizzi, F. & Ko, D.K. "ER stress and viral defense: advances and future perspectives on plant unfolded protein response in pathogenesis." Journal of Biological Chemistry 301,4, 108354+ (2025). [DOI: 10.1016/j.jbc.2025.108354] |
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| 2025 | Aljohani, M., Lan, L., Daly, H., Barbara, P.V., Hu, M., Nisar, S., Ding, S., Hallett, J., Watkins, N., Macalpine, W.J., et al. "Enhancing hydrogen production from bioenergy crops via photoreforming." Journal of the American Chemical Society 147,33, 29679–29686+ (2025). [DOI: 10.1021/jacs.5c01871] |
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| 2025 | Allemann, M.N., Lu, F., Presley, G.N., Valentino, H.R., Bedgar, D.L., Costa, M.A., Moinuddin, S.G., Azubuike, C.C., Vasileva, D.P., Klingeman, D.M., et al. "Elucidation of a bacterial pathways for catabolism of the β–β-linked dilignol pinoresinol." mBio DOI:10.1128/mbio.02010-25, (2025). [DOI: 10.1128/mbio.02010-25] |
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| 2025 | Alvarenga, F.B.M., Barros, K.O., Batista, T.M., Souza, G.F.L., Santos, A.R.O., Abegg, M.A., Sato, T.K., Hittinger, C.T., Lachance, M.-A. & Rosa, C.A. "Vanderwaltozyma urihicola sp. nov., a yeast species isolated from rotting wood and beetles in a Brazilian Amazonian rainforest biome." International Journal of Systematic and Evolutionary Microbiology 75,3, 006718+ (2025). [DOI: 10.1099/ijsem.0.006718] |
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| 2025 | Andersen, T.B., Braun, E., Brown, B.N.I., Hamberger, B., Knoor, L., Korkmaz, I., Reist, L., Sharpe, L., McKinley, B.A., Suggitt, J.O., et al. "Combining biotechnology with sustainability: feasibility of bioenergy sorghum in generating high-value bioproducts." Biotechnology Letters 47,4, 85+ (2025). [DOI: 10.1007/s10529-025-03623-2] |
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| 2025 | Aranguiz, K., Horianopoulos, L.C., Elkin, L., Aba, K.S., Jordahl, D., Overmyer, K.A., Wrobel, R.L., Coon, J.J., Shiu, S.-H., Rokas, A., et al. "Machine learning reveals genes impacting oxidative stress resistance across yeasts." Nature Communications 16,1, 5866+ (2025). [DOI: 10.1038/s41467-025-60189-3] |
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| 2025 | Baek, D., Abdulghani, A.J.A., Walsh, D.J., Hofsommer, D.T., Gerken, J.B., Shi, C., Chen, E.Y.-X., Hermans, I. & Stahl, S.S. "Can the Hock process be used to produce phenol from polystyrene?" Journal of the American Chemical Society 147,10, 8687–8694+ (2025). [DOI: 10.1021/jacs.4c18143] |
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| 2025 | Bajgain, Y., Langdon, Q.K., Krien, C.M., Jarzyna, M., Buh, K.V., Haase, M.A.B., Pasles, A., Wolters, J.F., Groenewald, M., Hittinger, C.T., et al. "Taxogenomic analysis of a novel yeast species, Lachancea rosae Sp. Nov. F.A., isolated from the wild rose Rosa californica." Yeast DOI:10.1002/yea.70000, (2025). [DOI: 10.1002/yea.70000] |
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| 2025 | Banta, A.B., Cuellar, R.A., Nadig, N., Davis, B.C. & Peters, J.M. "The promise of CRISPR-associated transposons for bacterial functional genomics." Current Opinion in Microbiology 83, 102563+ (2025). [DOI: 10.1016/j.mib.2024.102563] |
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| 2025 | Barros, K.O., Al-Oboudi, J., Freitas, L.F., Sousa, F.M., Batista, T.M., Santos, A.R.O., Morais, P.B., Sampaio, J.P., Lachance, M.-A., Hittinger, C.T., et al. "Taxogenomic analysis of Pichia senei sp. nov. and new insights into hybridization events in the Pichia cactophila species complex." FEMS Yeast Research 25, foaf037+ (2025). [DOI: 10.1093/femsyr/foaf037] |
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| 2025 | Barten, L.M., Crandall, J.G., Xie, D., Serate, J., Handowski, E., Jen, A., Overmyer, K.A., Coon, J.J., Hittinger, C.T., Landick, R., et al. "pH adjustment increases biofuel production from inhibitory switchgrass hydrolysates." Bioresource Technology 432, 132651+ (2025). [DOI: 10.1016/j.biortech.2025.132651] |
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| 2025 | Basso, B., Tadiello, T., Millar, N., Robertson, P., Paustian, K., Maureira, F.S., Albarenque, S., Baer, B., Price, L., Sharma, P., et al. "A multi model ensemble reveals net climate benefits from regenerative practices in US Midwest croplands." Nature Scientific Reports 15,1, 24881+ (2025). [DOI: 10.1038/s41598-025-08419-y] |
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| 2025 | Boismier, E.C., Aboulnaga, E.A. & TerAvest, M.A. "Zymomonas mobilis: bringing an ancient human tool into the genomic era." Current Opinion in Biotechnology 92, 103257+ (2025). [DOI: 10.1016/j.copbio.2025.103257] |
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| 2025 | Bozek, A., Mathis, F., Guillaumat, L., Mussig, J., Boizot, N., Ismael, A., Ralph, J., Lu, F., Sibout, R. & Beaugrand, J. "Determination of a suitable molar absorption coefficient (epsilon) for lignin analysis of fibrous plants using the CASA method." International Journal of Biological Macromolecules 308,Part 1, 142324+ (2025). [DOI: 10.1016/j.ijbiomac.2025.142324] |
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| 2025 | Bryson, A.E., Childs, K.L., Schlecht, N., Mathieu, D., Hamilton, J.P., Xin, H., Jiang, J., Buell, R. & Hamberger, B. "A high-quality genome assembly of the tetraploid Teucrium chamaedrys unveils a recent whole genome duplication and a large biosynthetic gene cluster for diterpenoid metabolism." Plant Communications 6,8, 101393+ (2025). [DOI: 10.1016/j.xplc.2025.101393] |
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| 2025 | Chakraborty, P., Falvo, G., Robertson, P. & Kravchenko, A. "Agricultural management legacy effects on switchgrass growth and soil carbon gains." Global Change Biology – Bioenergy 17, e70051+ (2025). [DOI: 10.1111/gcbb.70051] |
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| 2025 | Chakraborty, P., Guber, A. & Kravchenko, A. "Microbial O2 consumption as a function of pore structure in soils of sorghum, switchgrass, and prairie vegetation systems." Vadose Zone Journal 24,1, e70001+ (2025). [DOI: 10.1002/vzj2.70001] |
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| 2025 | Chakraborty, P., Kim, S.-J., Mahmoodabadi, M., Lewis, C., Kravchenko, A. & Brandizzi, F. "Higher levels of mixed-linkage (1,2;1,4)-β-glucan in transgenic grasses may impact soil C processing." Soil Biology and Biochemistry 210, 109946+ (2025). [DOI: 10.1016/j.soilbio.2025.109946] |
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| 2025 | Clark, N.L., Hittinger, C.T., Li-Byarlay, H., Rokas, A., Sackton, T.B. & Unckless, R.L. "Integrating intermediate traits in phylogenetic genotype-to-phenotype studies." Integrative and Comparative Biology 65,1, 63–73+ (2025). [DOI: 10.1093/icb/icaf037] |
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| 2025 | Córdova, C., Kravchenko, A.N., Miesel, J.R. & Robertson, P. "Soil carbon change in intensive agriculture after 25 years of conservation management." Geoderma 453, 117133+ (2025). [DOI: 10.1016/j.geoderma.2024.117133] |
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| 2025 | Cresswell, R., Dickson, A., Robertson, M., Gallagher, S., Risani, R., Le Guen, M.J., Temple, H., Liszka, A., Donaldson, L., Kirby, N., et al. "The molecular architecture distinctions between compression, opposite and normal wood of Pinus radiata." Frontiers in Plant Science 16, 1576928+ (2025). [DOI: 10.3389/fpls.2025.1576928] |
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| 2025 | Cross, M.C.G., Aboulnaga, E. & TerAvest, M.A. "A small number of point mutations confer formate tolerance in Shewanella oneidensis." Applied and Environmental Microbiology 91,5, e01968–24+ (2025). [DOI: 10.1128/aem.01968-24] |
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| 2025 | Cueny, R.R., Voter, A.F., McKenzie, A.M., Morgenstern, M., Myers, K.S., Place, M.M., Peters, J.M., Coon, J.J. & Keck, J.L. "Altering translation allows E. coli to overcome G-quadruplex stabilizers." Nucleic Acids Research 53,6, gkaf264+ (2025). [DOI: 10.1093/nar/gkaf264] |
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| 2025 | Dai, T., Ellebracht, N.C., Hunter-Sellars, E., Aui, A., Goldstein, H.M., Li, W., Hellwinckel, C.M., Price, L., Wong, A.A., Nico, P., et al. "Land-based resources for engineered carbon dioxide removal in the United States exceed the expected needs." One Earth 8,7, 101349+ (2025). [DOI: 10.1016/j.oneear.2025.101349] |
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| 2025 | David, K.T., Schraiber, J.G., Crandall, J.G., Labella, A.L., Opulente, D.A., Harrison, M.-C., Wolters, J.F., Zhou, X., Shen, X.-X., Groenewald, M., et al. "Convergent expansions of keystone gene families drive metabolic innovation in Saccharomycotina yeasts." Proceedings of the National Academy of Sciences of the United States of America 122,23, e2500165122+ (2025). [DOI: 10.1073/pnas.2500165122] |
