Publications

When it comes to interdisciplinary collaboration, the titles of GLBRC publications speak for themselves. Each new year of operation has seen more publications from multiple labs that span our research themes, accelerating the Center's production of the basic research that generates technology to convert cellulosic biomass to advanced biofuels and bioproducts.
Year Publication Keywords
2019
Sakai S, Rothamer D (2019) Impact of ethanol blending on particulate emissions from a spark-ignition direct-injection engine. Fuel 236: 1548-1558+. doi: 10.1016/j.fuel.2018.09.037
Conversion
2019
Liu Y, Landick B, Raman S (2019) A regulatory NADH/NAD+ redox biosensor for bacteria. ACS Synthetic Biology. doi: 10.1021/acssynbio.8b00485
2019
Mokomele T, Sousa L da C, Balan V, van Rensburg E, Dale BE, Görgens JF (2019) Incorporating anaerobic co-digestion of steam exploded or ammonia fiber expansion pretreated sugarcane residues with manure into a sugarcane-based bioenergy-livestock nexus. Bioresource Technology 272: 326-336+. doi: 10.1016/j.biortech.2018.10.049
Deconstruction
2019
Vermaas JV, Petridus L, Ralph J, Crowley MF, Beckham GT (2019) Systematic parameterization of lignin for the CHARMM force field. Green Chemistry 21: 109-122+. doi: 10.1039/C8GC03209B
2019
Mahon EL, Mansfield SD (2019) Tailor-made trees: engineering lignin for ease of processing and tomorrow’s bioeconomy. Current Opinion in Biotechnology 56: 147-155+. doi: 10.1016/j.copbio.2018.10.014
2019
Szymanski LM, Sanford GR, Heckman KA, Jackson RD, Marín-Spiotta E (2019) Conversion to bioenergy crops alters the amount and age of microbially-respired soil carbon. Soil Biology and Biochemistry 128: 35-44+. doi: 10.1016/j.soilbio.2018.08.025
Sustainability
2019
Kontur WS, Olmsted CN, Yusko LM, Niles AV, Walters KA, Beebe ET, Meulen KAV, Karlen SD, Gall DL, Noguera DR, et al (2019) A heterodimeric glutathione S-transferase that stereospecifically breaks lignin's β(R)-aryl ether bond reveals the diversity of bacterial β-etherases. Journal of Biological Chemistry. doi: 10.1074/jbc.RA118.006548
Conversion
2019
Abraha M, Gelfand I, Hamilton SK, Chen J, Robertson P (2019) Carbon debt of field-scale Conservation Reserve Program grasslands converted to annual and perennial bioenergy crops. Environmental Research Letters. doi: 10.1088/1748-9326/aafc10
Sustainability
2019
Roley SS, Xue C, Hamilton SK, Tiedje JM, Robertson P (2019) Isotopic evidence for episodic nitrogen fixation in switchgrass (Panicum virgatum L.). Soil Biololgy and Biochemistry 129: 90-98+. doi: 10.1016/j.soilbio.2018.11.006
Sustainability
2019
Williams DL, Ong RG, Mullet JE, Hodge DB (2019) Integration of pretreatment with simultaneous counter-current extraction of energy sorghum for high-titer mixed sugar production. Frontiers in Energy Research 6: 133+. doi: 10.3389/fenrg.2018.00133
Feedstocks, Deconstruction
2018
Johnson SR, Bhat WW, Bibik J, Turmo A, Hamberger B, Consortium EMG, Hamberger B (2018) A database-driven approach identifies additional diterpene synthase activities in the mint family (Lamiaceae). Journal of Biological Chemistry. doi: 10.1074/jbc.RA118.006025
Feedstocks
2018
Song B, Li B, Wang X, Shen W, Park S, Collings C, Feng A, Smith SJ, Walton JD, Ding S-Y (2018) Real-time imaging reveals that lytic polysaccharide monooxygenase promotes cellulase activity by increasing cellulose accessibility. Biotechnology for Biofuels 11: 11+. doi: 10.1186/s13068-018-1023-1
Deconstruction
2018
McKinley BA, Olson SN, Ritter KB, Herb DW, Karlen SD, Lu F, Ralph J, Rooney WL, Mullet JE (2018) Variation in energy sorghum hybrid TX08001 biomass composition and lignin chemistry during development under irrigated and non-irrigated field conditions. PLOS ONE. doi: 10.1371/journal.pone.0195863
Feedstocks
2018
delosSantos-Villalobos S, Kremer JM, Parra-Cota FI, Hayano-Kanashiro AC, García-Ortega LF, Gunturu SK, Tiedje JM, . Y. He S, Peña-Cabriales JJ (2018) Draft genome of the fungicidal biological control agent Burkholderia anthina strain XXVI. Archives of Microbiology 200: 803-810+. doi: 10.1007/s00203-018-1490-6
Sustainability
2018
Kravchenko AN, Guber AK, Quigley MY, Koestel J, Gandhi H, Ostrom NE (2018) X-ray computed tomography to predict soil N2O production via bacterial denitrification and N2O emission in contrasting bioenergy cropping systems. Global Change Biology – Bioenergy 10: 894-909+. doi: 10.1111/gcbb.12552
Sustainability
2018
Tian M, Reed JL (2018) Integrating proteomic or transcriptomic data into metabolic models using linear bound flux balance analysis. Bioinformatics. doi: 10.1093/bioinformatics/bty445
Conversion
2018
Du Z-Y, Alvaro J, Hyden B, Zienkiewicz K, Benning N, Zienkiewicz A, Bonito G, Benning C (2018) Enhancing oil production and harvest by combining the marine alga Nannochloropsis oceanica and the oleaginous fungus Mortierella elongata. Biotechnology for Biofuels 11: 174+. doi: 10.1186/s13068-018-1172-2
Feedstocks, Sustainability
2018
Opulente DA, Rollinson EJ, Bernick-Roehr C, Hulfachor AB, Rokas A, Kurtzman CP, Hittinger CT (2018) Factors driving metabolic diversity in the budding yeast subphylum. BMC Biology 16: 26+. doi: 10.1186/s12915-018-0498-3
Conversion
2018
Li Y, Shuai L, Kim H, Motagamwala AH, Mobley JK, Yue F, Tobimatsu Y, Havkin-Frenkel D, Chen F, Dixon RA, et al (2018) An “ideal lignin” facilitates full biomass utilization. Science Advances. doi: 10.1126/sciadv.aau2968
Feedstocks
2018
Bhalla A, Bansal N, Pattathil S, Li M, Shen W, Particka CA, Karlen SD, Phongpreecha T, Semaan RR, Gonzales-Vigil E, et al (2018) Engineered lignin in poplar biomass facilitates Cu-catalyzed alkaline-oxidative pretreatment. ACS Sustainable Chemistry & Engineering 6: 2932-2941+. doi: 10.1021/acssuschemeng.7b02067
Feedstocks, Deconstruction
2018
Wu W, Long MR, Zhang X, Reed JL, Maravelias CT (2018) A framework for the identification of promising bio-based chemicals. Biotechnology and Bioengineering 115: 2328-2340+. doi: 10.1002/bit.26779
Deconstruction, Conversion
2018
Gomes EA, Lana UGP, Quensen JF, de Sousa SM, Oliveira CA, Guo J, Guimarães LJM, Tiedje JM (2018) Root-associated microbiome of maize genotypes with contrasting phosphorus use efficiency. Phytobiomes. doi: 10.1094/PBIOMES-03-18-0012-R
Sustainability
2018
Poliner E, Pulman JA, Zienkiewicz K, Childs K, Benning C, Farre EM (2018) A toolkit for Nannochloropsis oceanica CCMP1779 enables gene stacking and genetic engineering of the eicosapentaenoic acid pathway for enhanced long-chain polyunsaturated fatty acid production. Plant Biotechnology Journal 16: 298-309+. doi: 10.1111/pbi.12772
Feedstocks
2018
Jones CD, Oates LG, Robertson P, Izaurralde C (2018) Perennialization and cover cropping mitigate soil carbon loss from residue harvesting. Journal of Environmental Quality 47: 710-717+. doi: 10.2134/jeq2017.04.0177
Sustainability
2018
Song Y, Mobley JK, Motagamwala AH, Isaacs M, Dumesic JA, Ralph J, Lee AF, Wilson K, Crocker M (2018) Gold-catalyzed conversion of lignin to low molecular weight aromatics. Chemical Science 9: 8127-8133+. doi: 10.1039/C8SC03208D
Feedstocks