Publications

When it comes to interdisciplinary collaboration, the titles of GLBRC publications speak for themselves. Each new year of operation has seen more publications from multiple labs that span our research themes, accelerating the Center's production of the basic research that generates technology to convert cellulosic biomass to advanced biofuels and bioproducts.
Year Publication Keywords
2023
Mechan, M., Mullet, J. & Shade, A. "Phyllosphere exudates select for distinct microbiome members in sorghum epicuticular wax and aerial root mucilage." Phytobiomes Journal DOI: 10.1094/PBIOMES-08-22-0046-FI, (2023). [DOI: 10.1094/pbiomes-08-22-0046-fi]
Sustainability
2023
Mottiar, Y., Smith, R.A., Karlen, S.D., Ralph, J. & Mansfield, S.D. "Evolution of p-coumaroylated lignin in eudicots provides new tools for cell wall engineering." New Phytologist 237,1, 251-264+ (2023). [DOI: 10.1111/nph.18518]
2023
Shade, A. "Microbiome rescue: directing resilience of environmental microbial communities." Current Opinion in Microbiology 72, 102263+ (2023). [DOI: 10.1016/j.mib.2022.102263]
2023
Sumer, Z. & Van Lehn, R.C. "Heuristic computational model for predicting lignin solubility in tailored organic solvents." ACS Sustainable Chemistry & Engineering 11,1, 187-198+ (2023). [DOI: 10.1021/acssuschemeng.2c05199]
2023
Taifan, G.S.P. & Maravelias, C.T. "Integrated membrane material design and system synthesis." Chemical Engineering Science DOI: 10.1016/j.ces.2022.118406, 118406+ (2023). [DOI: 10.1016/j.ces.2022.118406]
Sustainability
2023
Tejera-Nieves, M., Abraha, M., Chen, J., Hamilton, S.K., Robertson, P. & Walker, B.J. "Seasonal decline in leaf photosynthesis in perennial switchgrass explained by sink limitations and water deficit." Frontiers in Plant Science 13, 1023571+ (2023). [DOI: 10.3389/fpls.2022.1023571]
2023
Tilhou, N.W. & Casler, M.D. "Switchgrass sward establishment selection is consistent across multiple environments and fertilization levels." Grassland Research DOI: 10.1002/glr2.12035, (2023). [DOI: 10.1002/glr2.12035]
Sustainability
2023
Barros, K.O., Alvarenga, F.B.M., Magni, G., Souza, G.F.L., Abegg, M.A., Palladino, F., da Silva, S.S., Rodrigues, R.C.L.B., Sato, T.K., Hittinger, C.T., et al. "The Brazilian Amazonian rainforest harbors a high diversity of yeasts associated with rotting wood, including many candidates for new yeast species." Yeast DOI: 10.1002/yea.3837, (2023). [DOI: 10.1002/yea.3837]
2023
Cheng, F., Liu, S., Karlen, S.D., Kim, H., Lu, F., Ralph, J., Ramos, L.M.V., Huber, G.W. & Dumesic, J.A. "Poplar lignin structural changes during extraction in γ-valerolactone (GVL)." Green Chemistry 25, 336-347+ (2023). [DOI: 10.1039/D2GC03446H]
2023
Dong, X., Mayes, H.B., Morreel, K., Katahira, R., Li, Y., Ralph, J., Black, B.A. & Beckham, G.T. "Energy-resolved mass spectrometry as a tool for identification of lignin depolymerization products." ChemSusChem 16,1, (2023). [DOI: 10.1002/cssc.202201441]
2023
Kim, S., Dale, B.E., Martinez-Feria, R., Basso, B., Thelen, K., Maravelias, C.T., Landis, D., Lark, T.J. & Robertson, P. "Global warming intensity of biofuel derived from switchgrass grown on marginal land in Michigan." Global Change Biology - Bioenergy DOI: 10.1111/gcbb.13024, (2023). [DOI: 10.1111/gcbb.13024]
2023
Kim, S.-J. & Brandizzi, F. "Microscopy and immunocytochemistry-based methods to study cell wall biosynthetic enzymes in the Golgi." in Golgi. Methods in Molecular Biology. vol. 2557 39-51+ (Humana, 2023). [DOI: 10.1007/978-1-0716-2639-9_4]
2023
Ko, D.K. & Brandizzi, F. "Coexpression network construction and visualization from transcriptomes underlying ER stress responses." in Plant Proteostasis. Methods in Molecular Biology. vol. 2581 385-401+ (New York, New York, 2023). [DOI: 10.1007/978-1-0716-2784-6_27]
2022
Lark, T.J., Hendricks, N.P., Smith, A., Pates, N., Spawn-Lee, S.A., Bougie, M., Booth, E.G., Kucharik, C.J. & Gibbs, H.K. "Environmental outcomes of the US Renewable Fuel Standard." Proceedings of the National Academy of Sciences of the United States of America 119,9, (2022). [DOI: 10.1073/pnas.2101084119]
Sustainability
2022
Li, J., Maravelias, C.T. & Van Lehn, R.C. "Adaptive conformer sampling for property prediction using the conductor-like screening model for real solvents." Industrial & Engineering Chemistry Research 61,25, 9025-9036+ (2022). [DOI: 10.1021/acs.iecr.2c01163]
2022
Li, X., Sarma, S.J., Sumner, L.W., Jones, D. & Last, R.L. "Switchgrass metabolomics reveals striking genotypic and developmental differences in specialized metabolic phenotypes." Journal of Agricultural and Food Chemistry 70,26, 8010-8023+ (2022). [DOI: 10.1021/acs.jafc.2c01306]
Sustainability
2022
Li, Y., Liu, H., Steenwyk, J.L., Labella, A.L., Harrison, M.-C., Groenewald, M., Zhou, X., Shen, X.-X., Zhao, T., Hittinger, C.T., et al. "Contrasting modes of macro and microsynteny evolution in a eukaryotic subphylum." Current Biology 32, 5335-5343+ (2022). [DOI: 10.1016/j.cub.2022.10.025]
2022
Linz, A.M., Ma, Y., Scholz, S., Noguera, D.R. & Donohue, T.J. "iNovo479: metabolic modeling provides a roadmap to optimize bioproduct yield from deconstructed lignin aromatics by Novosphingobium aromaticivorans." Metabolites 12,4, 366+ (2022). [DOI: 10.3390/metabo12040366]
2022
Liu, Y., Evans, S.E., Friesen, M.L. & Tiemann, L.K. "Root exudates shift how N mineralization and N fixation contribute to the plant-available N supply in low fertility soils." Soil Biology and Biochemistry 165, 108541+ (2022). [DOI: 10.1016/j.soilbio.2021.108541]
Sustainability
2022
Mahon, E.L., de Vries, L., Jang, S.-K., Middar, S., Kim, H., Unda, F., Ralph, J. & Mansfield, S.D. "Exogenous chalcone synthase expression in developing poplar xylem incorporates naringenin into lignins." Plant Physiology 188, 984-996+ (2022). [DOI: 10.1093/plphys/kiab499]
2022
Malmstrom, C.M., Busch, A.K., Cole, E.A., Trebicki, P., Berndardo, P., Brown, A.K., Landis, D.A. & Werling, B.P. "Emerging wild virus of native grass bioenergy feedstock is well established in the Midwestern USA and associated with premature stand senescence." Global Change Biology – Bioenergy 14,4, 463-480+ (2022). [DOI: 10.1111/gcbb.12927]
Sustainability
2022
Martin, T. & Sprunger, C. D. "Sensitive measures of soil health reveal carbon stability across a management intensity and plant biodiversity gradient." Frontiers in Soil Science 2, 917885+ (2022). [DOI: 10.3389/fsoil.2022.917885]
Sustainability
2022
Martinez-Feria, R., Basso, B. & Kim, S. "Boosting climate change mitigation potential of perennial lignocellulosic crops grown on marginal lands." Environmental Research Letters 17, 044004+ (2022). [DOI: 10.1088/1748-9326/ac541b]
Sustainability
2022
McDaniel, E.A., van Steenbrugge, J.J.M., Noguera, D.R., Raaijmakers, J.M., Medema, M.H. & Oyserman, B.O. "TbasCO: trait-based comparative ‘omics identifies ecosystem-level and niche-differentiating adaptations of an engineered microbiome." ISME Communications 2, 111+ (2022). [DOI: 10.1038/s43705-022-00189-2]
2022
McKenzie, A.M., Henry, C., Myers, K.S., Place, M.M. & Keck, J.L. "Identification of genetic interactions with priB links the PriA/PriB DNA replication restart pathway to double-strand DNA break repair in Escherichia coli." G3: Genes | Genomes | Genetics 12,12, (2022). [DOI: 10.1093/g3journal/jkac295]