| Year | Publication | Keywords |
|---|---|---|
| 2024 | Walters, K.A., Myers, K.S., Donohue, T.J. & Noguera, D.R. "Metagenome-assembled genomes from microbiomes fermenting dairy coproducts." Microbiology Resource Announcements 13,7, e00173–24+ (2024). [DOI: 10.1128/mra.00173-24] |
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| 2024 | Walters, K.A., Myers, K.S., Ingle, A.T., Donohue, T.J. & Noguera, D.R. "Effect of temperature and pH on microbial communities fermenting a dairy coproduct mixture." Fermentation 10,8, 422+ (2024). [DOI: 10.3390/ fermentation10080422] |
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| 2024 | Wang, P., Lehti-Shiu, M.D., Lotreck, S., Abá, K.S., Krysan, P.J. & Shiu, S.-H. "Prediction of plant complex traits via integration of multi-omics data." Nature Communications 15,1, 6856+ (2024). [DOI: 10.1038/s41467-024-50701-6] |
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| 2024 | Weeda, E.P., Holland, C.M., de Bueren, J.B., Yuan, Z., Alherech, M., Coplien, J., Haak, D., Hegg, E.L., Luterbacher, J., Root, T.W., et al. "O2-permeable membrane reactor for continuous oxidative depolymerization of lignin." Joule 8,12, P3336–3346+ (2024). [DOI: 10.1016/j.joule.2024.08.015] |
Conversion |
| 2024 | Wilkes, R.A., Borchert, A.J., Garcia, V.E., Geiselman, G.M., Liu, S., Guss, A.M., Michener, J.K., Noguera, D.R., Masai, E., Gladden, J.M., et al. "Comparison of microbial strains as candidate hosts and genetic reservoirs for the valorization of lignin streams." Green Chemistry 26,24, 12053–12069+ (2024). [DOI: 10.1039/D4GC03876B] |
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| 2024 | Xie, Y., Spawn-Lee, S.A., Radeloff, V.C., Yin, H., Robertson, P. & Lark, T.J. "Cropland abandonment between 1986 and 2018 across the United States: spatiotemporal patterns and current land uses." Environmental Research Letters 19, 044009+ (2024). [DOI: 10.1088/1748-9326/ad2d12] |
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| 2024 | Yoshioka, K., Kim, H., Lu, F., De Ridder, N., Vanholme, R., Kajita, S., Boerjan, W. & Ralph, J. "Hydroxycinnamaldehyde-derived benzofuran components in lignins." Plant Physiology 194,3, 1370–1382+ (2024). [DOI: 10.1093/plphys/kiad514] |
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| 2024 | Zavala, B., Dineen, L., Fisher, K.J., Opulente, D.A., Harrison, M.-C., Wolters, J.F., Shen, X.-X., Zhou, X., Groenewald, M., Hittinger, C.T., et al. "Genomic factors shaping codon usage across the Saccharomycotina subphylum." G3: Genes | Genomes | Genetics 14,11, jkae207+ (2024). [DOI: 10.1093/g3journal/jkae207] |
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| 2024 | Zou, H., Chen, J., Li, X., Abraha, M., Zhao, X. & Tang, J. "Modeling net ecosystem exchange of CO2 with gated recurrent unit neural networks." Agricultural and Forest Meteorology 350, 109985+ (2024). [DOI: 10.1016/j.agrformet.2024.109985] |
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| 2023 | Casler, M.D., Lee, D., Mitchell, R.B., Moore, K.J., Adler, P.R., Sulc, M., Johnson, K.D., Kallenbach, R.L., Boe, A.R., Mathison, R.D., et al. "Biomass quality responses to selection for increased biomass yield in perennial energy grasses." BioEnergy Research 16,2, 877–885+ (2023). [DOI: 10.1007/s12155-022-10513-2] |
Sustainability |
| 2023 | Dong, X., Mayes, H.B., Morreel, K., Katahira, R., Li, Y., Ralph, J., Black, B.A. & Beckham, G.T. "Energy-resolved mass spectrometry as a tool for identification of lignin depolymerization products." ChemSusChem 16,1, e202201441+ (2023). [DOI: 10.1002/cssc.202201441] |
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| 2023 | Hellinger, J., Kim, H., Ralph, J. & Karlen, S.D. "p-Coumaroylation of lignin occurs outside of commelinid monocots in the eudicot genus Morus (mulberry)." Plant Physiology 191,2, 854–861+ (2023). [DOI: 10.1093/plphys/kiac485] |
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| 2023 | Ko, D.K. & Brandizzi, F. "Coexpression network construction and visualization from transcriptomes underlying ER stress responses." in Plant Proteostasis. Methods in Molecular Biology. vols. 2581 385–401+ (Humana, 2023). [DOI: 10.1007/978-1-0716-2784-6_27] |
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| 2023 | Mottiar, Y., Karlen, S.D., Goacher, R.E., Ralph, J. & Mansfield, S.D. "Metabolic engineering of p-hydroxybenzoate in poplar lignin." Plant Biotechnology Journal 21,1, 176–188+ (2023). [DOI: 10.1111/pbi.13935] |
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| 2023 | Mottiar, Y., Smith, R.A., Karlen, S.D., Ralph, J. & Mansfield, S.D. "Evolution of p-coumaroylated lignin in eudicots provides new tools for cell wall engineering." New Phytologist 237,1, 251–264+ (2023). [DOI: 10.1111/nph.18518] |
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| 2023 | Roney, H.E. & Walker, B.J. "Photon to plate: a holistic view of photosynthetic and anthropogenic energy fluxes." Food and Energy Security 12,1, e348+ (2023). [DOI: 10.1002/fes3.348] |
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| 2023 | Alberge, F., Lakey, B.D., Schaub, R.E., Dohnalkova, A.C., Lemmer, K.C., Dillard, J.P., Noguera, D.R. & Donohue, T.J. "A previously uncharacterized divisome-associated lipoprotein, DalA, is needed for normal cell division in Rhodobacterales." mBio 14,4, e01203–23+ (2023). [DOI: 10.1128/mbio.01203-23] |
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| 2023 | Barros, K.O., Alvarenga, F.B.M., Magni, G., Souza, G.F.L., Abegg, M.A., Palladino, F., da Silva, S.S., Rodrigues, R.C.L.B., Sato, T.K., Hittinger, C.T., et al. "The Brazilian Amazonian rainforest harbors a high diversity of yeasts associated with rotting wood, including many candidates for new yeast species." Yeast 40,2, 84–101+ (2023). [DOI: 10.1002/yea.3837] |
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| 2023 | Basyal, B. & Walker, B.J. "Arbuscular mycorrhizal fungi enhance yield and photosynthesis of switchgrass (Panicum virgatum L.) under extreme drought and alters the biomass composition of the host plant." Biomass and Bioenergy 177, 106936+ (2023). [DOI: 10.1016/j.biombioe.2023.106936] |
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| 2023 | Bell-Dereske, L.P., Benucci, G.M.N., da Costa, P.B., Bonito, G., Friesen, M.L., Tiemann, L.K. & Evans, S.E. "Regional biogeography versus intra-annual dynamics of the root and soil microbiome." Environmental Microbiome 18,1, 50+ (2023). [DOI: 10.1186/s40793-023-00504-x] |
Sustainability |
| 2023 | Benucci, G.M.N., Toosi, E.R., Yang, F., Marsh, T.L., Bonito, G.M. & Kravchenko, A. "The microbiome structure of decomposing plant leaves in soil depends on plant species, soil pore sizes, and soil moisture content." Frontiers in Microbiology 14, 1172862+ (2023). [DOI: 10.3389/fmicb.2023.1172862] |
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| 2023 | Bhandari, D.D., Ko, D.K., Kim, S.-J., Nomura, K., He, S.Y. & Brandizzi, F. "Defense against phytopathogens relies on efficient antimicrobial protein secretion mediated by the microtubule-binding protein TGNap1." Nature Communications 14,1, 6357+ (2023). [DOI: 10.1038/s41467-023-41807-4] |
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| 2023 | Bonde, N.J., Wood, E.A., Myers, K.S., Place, M., Keck, J.L. & Cox, M.M. "Identification of recG genetic interactions in Escherichia coli by transposon sequencing." Journal of Bacteriology 205,12, e00184–23+ (2023). [DOI: 10.1128/jb.00184-23] |
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| 2023 | Brouckaert, M., Peng, M., Hofer, R., Houari, L.E., Darrah, C., Storme, V., Saeys, Y., Vanholme, R., Goeminne, G., Timokhin, V.I., et al. "QT-GWAS: a novel method for unveiling biosynthetic loci affecting qualitative metabolic traits." Molecular Plant 16,7, P1212–1227+ (2023). [DOI: 10.1016/j.molp.2023.06.004] |
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| 2023 | Bryson, A.E., Lanier, E.R., Lau, K.H., Hamilton, J.P., Vaillancourt, B., Mathieu, D., Yocca, A.E., Miller, G.P., Edger, P.P., Buell, R., et al. "Uncovering a miltiradiene biosynthetic gene cluster in the Lamiaceae reveals a dynamic evolutionary trajectory." Nature Communications 14,1, 343+ (2023). [DOI: 10.1038/s41467-023-35845-1] |
