| Year | Publication | Keywords |
|---|---|---|
| 2024 | Yoshioka, K., Kim, H., Lu, F., De Ridder, N., Vanholme, R., Kajita, S., Boerjan, W. & Ralph, J. "Hydroxycinnamaldehyde-derived benzofuran components in lignins." Plant Physiology 194,3, 1370–1382+ (2024). [DOI: 10.1093/plphys/kiad514] |
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| 2024 | Zavala, B., Dineen, L., Fisher, K.J., Opulente, D.A., Harrison, M.-C., Wolters, J.F., Shen, X.-X., Zhou, X., Groenewald, M., Hittinger, C.T., et al. "Genomic factors shaping codon usage across the Saccharomycotina subphylum." G3: Genes | Genomes | Genetics 14,11, jkae207+ (2024). [DOI: 10.1093/g3journal/jkae207] |
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| 2024 | Zou, H., Chen, J., Li, X., Abraha, M., Zhao, X. & Tang, J. "Modeling net ecosystem exchange of CO2 with gated recurrent unit neural networks." Agricultural and Forest Meteorology 350, 109985+ (2024). [DOI: 10.1016/j.agrformet.2024.109985] |
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| 2023 | Casler, M.D., Lee, D., Mitchell, R.B., Moore, K.J., Adler, P.R., Sulc, M., Johnson, K.D., Kallenbach, R.L., Boe, A.R., Mathison, R.D., et al. "Biomass quality responses to selection for increased biomass yield in perennial energy grasses." BioEnergy Research 16,2, 877–885+ (2023). [DOI: 10.1007/s12155-022-10513-2] |
Sustainability |
| 2023 | Dong, X., Mayes, H.B., Morreel, K., Katahira, R., Li, Y., Ralph, J., Black, B.A. & Beckham, G.T. "Energy-resolved mass spectrometry as a tool for identification of lignin depolymerization products." ChemSusChem 16,1, e202201441+ (2023). [DOI: 10.1002/cssc.202201441] |
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| 2023 | Hellinger, J., Kim, H., Ralph, J. & Karlen, S.D. "p-Coumaroylation of lignin occurs outside of commelinid monocots in the eudicot genus Morus (mulberry)." Plant Physiology 191,2, 854–861+ (2023). [DOI: 10.1093/plphys/kiac485] |
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| 2023 | Ko, D.K. & Brandizzi, F. "Coexpression network construction and visualization from transcriptomes underlying ER stress responses." in Plant Proteostasis. Methods in Molecular Biology. (eds. Lois, L. M. & Trujillo, M.) vols. 2581 385–401+ (Humana, 2023). [DOI: 10.1007/978-1-0716-2784-6_27] |
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| 2023 | Mottiar, Y., Karlen, S.D., Goacher, R.E., Ralph, J. & Mansfield, S.D. "Metabolic engineering of p-hydroxybenzoate in poplar lignin." Plant Biotechnology Journal 21,1, 176–188+ (2023). [DOI: 10.1111/pbi.13935] |
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| 2023 | Mottiar, Y., Smith, R.A., Karlen, S.D., Ralph, J. & Mansfield, S.D. "Evolution of p-coumaroylated lignin in eudicots provides new tools for cell wall engineering." New Phytologist 237,1, 251–264+ (2023). [DOI: 10.1111/nph.18518] |
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| 2023 | Roney, H.E. & Walker, B.J. "Photon to plate: a holistic view of photosynthetic and anthropogenic energy fluxes." Food and Energy Security 12,1, e348+ (2023). [DOI: 10.1002/fes3.348] |
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| 2023 | Alberge, F., Lakey, B.D., Schaub, R.E., Dohnalkova, A.C., Lemmer, K.C., Dillard, J.P., Noguera, D.R. & Donohue, T.J. "A previously uncharacterized divisome-associated lipoprotein, DalA, is needed for normal cell division in Rhodobacterales." mBio 14,4, e01203–23+ (2023). [DOI: 10.1128/mbio.01203-23] |
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| 2023 | Barros, K.O., Alvarenga, F.B.M., Magni, G., Souza, G.F.L., Abegg, M.A., Palladino, F., da Silva, S.S., Rodrigues, R.C.L.B., Sato, T.K., Hittinger, C.T., et al. "The Brazilian Amazonian rainforest harbors a high diversity of yeasts associated with rotting wood, including many candidates for new yeast species." Yeast 40,2, 84–101+ (2023). [DOI: 10.1002/yea.3837] |
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| 2023 | Basyal, B. & Walker, B.J. "Arbuscular mycorrhizal fungi enhance yield and photosynthesis of switchgrass (Panicum virgatum L.) under extreme drought and alters the biomass composition of the host plant." Biomass and Bioenergy 177, 106936+ (2023). [DOI: 10.1016/j.biombioe.2023.106936] |
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| 2023 | Bell-Dereske, L.P., Benucci, G.M.N., da Costa, P.B., Bonito, G., Friesen, M.L., Tiemann, L.K. & Evans, S.E. "Regional biogeography versus intra-annual dynamics of the root and soil microbiome." Environmental Microbiome 18,1, 50+ (2023). [DOI: 10.1186/s40793-023-00504-x] |
Sustainability |
| 2023 | Benucci, G.M.N., Toosi, E.R., Yang, F., Marsh, T.L., Bonito, G.M. & Kravchenko, A. "The microbiome structure of decomposing plant leaves in soil depends on plant species, soil pore sizes, and soil moisture content." Frontiers in Microbiology 14, 1172862+ (2023). [DOI: 10.3389/fmicb.2023.1172862] |
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| 2023 | Bhandari, D.D., Ko, D.K., Kim, S.-J., Nomura, K., He, S.Y. & Brandizzi, F. "Defense against phytopathogens relies on efficient antimicrobial protein secretion mediated by the microtubule-binding protein TGNap1." Nature Communications 14,1, 6357+ (2023). [DOI: 10.1038/s41467-023-41807-4] |
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| 2023 | Bonde, N.J., Wood, E.A., Myers, K.S., Place, M., Keck, J.L. & Cox, M.M. "Identification of recG genetic interactions in Escherichia coli by transposon sequencing." Journal of Bacteriology 205,12, e00184–23+ (2023). [DOI: 10.1128/jb.00184-23] |
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| 2023 | Brouckaert, M., Peng, M., Hofer, R., Houari, L.E., Darrah, C., Storme, V., Saeys, Y., Vanholme, R., Goeminne, G., Timokhin, V.I., et al. "QT-GWAS: a novel method for unveiling biosynthetic loci affecting qualitative metabolic traits." Molecular Plant 16,7, P1212–1227+ (2023). [DOI: 10.1016/j.molp.2023.06.004] |
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| 2023 | Bryson, A.E., Lanier, E.R., Lau, K.H., Hamilton, J.P., Vaillancourt, B., Mathieu, D., Yocca, A.E., Miller, G.P., Edger, P.P., Buell, R., et al. "Uncovering a miltiradiene biosynthetic gene cluster in the Lamiaceae reveals a dynamic evolutionary trajectory." Nature Communications 14,1, 343+ (2023). [DOI: 10.1038/s41467-023-35845-1] |
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| 2023 | Callaghan, M.M., Thusoo, E., Sharma, B.D., Getahun, F., Stevenson, D.M., Maranas, C., Olson, D.G., Lynd, L.R. & Amador-Noguez, D. "Deuterated water as a substrate-agnostic isotope tracer for investigating reversibility and thermodynamics of reactions in central carbon metabolism." Metabolic Engineering 80, 254–266+ (2023). [DOI: 10.1016/j.ymben.2023.10.006] |
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| 2023 | Casler, M.D. & Lee, D. "Registration of ‘Cedar Creek’ switchgrass." Journal of Plant Registrations 17,3, 483–487+ (2023). [DOI: 10.1002/plr2.20294] |
Feedstocks |
| 2023 | Chakraborty, S., Venkataraman, M., Infante, V., Pfleger, B.F. & Ané, J.-M. "Scripting a new dialogue between diazotrophs and crops." Trends in Microbiology 32,6, P577–589+ (2023). [DOI: 10.1016/j.tim.2023.08.007] |
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| 2023 | Chaudhury, D., Torkelson, E.R., Meyers, K.A., Acheson, J.F., Landucci, L.M., Pu, Y., Sun, Z., Tonelli, M., Bingman, C.A., Smith, R.A., et al. "Rapid biocatalytic synthesis of aromatic acid CoA thioesters utilizing microbial aromatic acid CoA ligases." ChemBioChem 24,9, e202300001+ (2023). [DOI: 10.1002/cbic.202300001] |
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| 2023 | Chemelewski, R., McKinley, B.A., Finlayson, S. & Mullet, J.E. "Epicuticular wax accumulation and regulation of wax pathway gene expression during bioenergy Sorghum stem development." Frontiers in Plant Science 14, 1227859+ (2023). [DOI: 10.3389/fpls.2023.1227859] |
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| 2023 | Chen, M., Li, Y., Lu, F., Luterbacher, J.S. & Ralph, J. "Lignin hydrogenolysis: phenolic monomers from lignin and associated phenolates across plant clades." ACS Sustainable Chemistry & Engineering 11,27, 10001–10017+ (2023). [DOI: 10.1021/acssuschemeng.3c01320] |
