Publications

Pattathil, S., Hahn, M.G., Dale, B.E. & Chundawat, S.P.S. "Insights into plant cell wall structure, architecture, and integrity using glycome profiling of native and AFEX™-pre-treated biomass." Journal of Experimental Botany 66,14, 4279–4294+ (2015). [DOI: 10.1093/jxb/erv107]

Piotrowski, J.S., Okada, H., Lu, F., Li, S.C., Hinchman, L., Ranjan, A., Smith, D.L., Higbee, A.J., Ulbrich, A., Coon, J.J., et al. "Plant-derived antifungal agent poacic acid targets β-1,3-glucan." Proceedings of the National Academy of Sciences of the United States of America 112,12, E1490-E1497+ (2015). [DOI: 10.1073/pnas.1410400112]

Piotrowski, J.S., Simpkins, S.W., Li, S.C., Deshpande, R., McIlwain, S.J., Ong, I.M., Myers, C.L., Boone, C.B. & Andersen, R.J. "Chemical genomic profiling via barcode sequencing to predict compound mode of action." in Chemical Biology - Methods and Protocols. vols. 1263 299–318+ (Springer, 2015). [DOI: 10.1007/978-1-4939-2269-7_23]

Pisithkul, T., Jacobson, T.B., O’Brien, T.J., Stevenson, D.M. & Amador-Noguez, D. "Phenolic amides are potent inhibitors of de novo nucleotide biosynthesis." Applied and Environmental Microbiology 81,17, 5761–5772+ (2015). [DOI: 10.1128/AEM.01324-15]

Pollard, M., Delamarter, D., Martin, T.M. & Shachar-Hill, Y. "Lipid labeling from acetate or glycerol in cultured embryos of Camelina sativa seeds: a tale of two substrates." Phytochemistry 118, 192–203+ (2015). [DOI: 10.1016/j.phytochem.2015.07.021]

Pollard, M., Martin, T.M. & Shachar-Hill, Y. "Lipid analysis of developing Camelina sativa seeds and cultured embryos." Phytochemistry 118, 23–32+ (2015). [DOI: 10.1016/j.phytochem.2015.07.022]

Rachid, C.T.C.C., Balieiro, F.C., Fonseca, E.S., Peixoto, R.S., Chaer, G.M., Tiedje, J.M. & Rosado, A.S. "Intercropped silviculture systems, a key to achieving soil fungal community management in Eucalyptus plantations." PLOS ONE 10,2, e0118515+ (2015). [DOI: 10.1371/journal.pone.0118515]

Rafiee, M., Miles, K.C. & Stahl, S.S. "Electrocatalytic alcohol oxidation with TEMPO and bicyclic nitroxyl derivatives: driving force trumps steric effects." Journal of the American Chemical Society 137,46, 14751–14757+ (2015). [DOI: 10.1021/jacs.5b09672]

Ruberti, C., Kim, S.-J., Stefano, G. & Brandizzi, F. "Unfolded protein response in plants: one master, many questions." Current Opinion in Plant Biology 27, 59–66+ (2015). [DOI: 10.1016/j.pbi.2015.05.016]

Russ, R.S., Wangen, S.R., Nye, L., Shapiro, B., Strinz, W. & Ferris, M. "Fields of fuel." The Science Teacher 82,3, 3–8+ (2015).

Serate, J., Xie, D., Pohlmann, E., , Shabani, M., Hinchman, L., Higbee, A., Mcgee, M., La Reau, A., Klinger, G.E., et al. "Controlling microbial contamination during hydrolysis of AFEX-pretreated corn stover and switchgrass: effects on hydrolysate composition, microbial response and fermentation." Biotechnology for Biofuels 8, 180+ (2015). [DOI: 10.1186/s13068-015-0356-2]

Singh, S., Cheng, G., Sathitsuksanoh, N., Wu, D., Varanasi, P., George, A., Balan, V., Gao, X., Kumar, R., Dale, B.E., et al. "Comparison of different biomass pretreatment techniques and their impact on chemistry and structure." Frontiers in Energy Research 2, 62+ (2015). [DOI: 10.3389/fenrg.2014.00062]

Sinistore, J.C., Reinemann, D.J., Izaurralde, C., Cronin, K.R., Meier, P.J., Runge, T.M. & Zhang, X. "Life cycle assessment of switchgrass cellulosic ethanol production in the Wisconsin and Michigan agricultural contexts." BioEnergy Research 897–909+ (2015). [DOI: 10.1007/s12155-015-9611-4]

Skevas, T., Hayden, N.J., Swinton, S.M. & Lupi, F. "Landowner willingness to supply marginal land for bioenergy production." Land Use Policy 50, 507–517+ (2015). [DOI: 10.1016/j.landusepol.2015.09.027]

Slater, S.C., Simmons, B.A., Rogers, T.S., Phillips, M.F., Nordahl, K. & Davison, B.H. "The DOE Bioenergy Research Centers: history, operations, and scientific output." BioEnergy Research 8,3, 881–896+ (2015). [DOI: 10.1007/s12155-015-9660-8]

Slininger, P.J., Shea-Andersh, M.A., Thompson, S.R., Dien, B.S., Kurtzman, C.P., Balan, V., Sousa, L. da C., Uppugundla, N., Dale, B.E. & Cotta, M.A. "Evolved strains of Scheffersomyces stipitis reaching high ethanol productivity on acid- and base-pretreated biomass hydrolyzate at high solids loading." Biotechnology for Biofuels 8,60, 27+ (2015). [DOI: 10.1186/s13068-015-0239-6]

Smith, R.A., Gonzales-Vigil, E., Karlen, S.D., Park, J.-Y., Lu, F., Wilkerson, C.G., Samuels, L., Ralph, J. & Mansfield, S.D. "Engineering monolignol p-coumarate conjugates into poplar and Arabidopsis lignins." Plant Physiology 169, 2992–3001+ (2015). [DOI: 10.1104/pp.15.00815]

Spero, M.A., Aylward, F.O., Currie, C.R. & Donohue, T.J. "Phylogenomic analysis and predicted physiological role of the proton-translocating NADH:quinone oxidoreductase (complex I) across bacteria." mBio 6,2, e00389–15+ (2015). [DOI: 10.1128/mBio.00389-15]

Su, Y.-K., Willis, L.B. & Jeffries, T.W. "Effects of aeration on growth, ethanol and polyol accumulation by Spathaspora passalidarum NRRL Y-27907 and Scheffersomyces stipitis NRRL Y-7124." Biotechnology and Bioengineering 112,3, 457–469+ (2015). [DOI: 10.1002/bit.25445]

Sylvester, K., Wang, Q.-M.M., James, B., Mendez, R., Hulfachor, A.B. & Hittinger, C.T. "Temperature and host preferences drive the diversification of Saccharomyces and other yeasts: a survey and the discovery of eight new yeast species." FEMS Yeast Research 15,3, fov002+ (2015). [DOI: 10.1093/femsyr/fov002]

Tang, X., Sousa, L. da C., Jin, M., Chundawat, S.P.S., Chambliss, K., Lau, M.W., Xiao, Z., Dale, B.E. & Balan, V. "Designer synthetic media for studying microbial-catalyzed biofuel production." Biotechnology for Biofuels 8, 1+ (2015). [DOI: 10.1186/s13068-014-0179-6]

Tanger, P., Vega-Sánchez, M.E., Fleming, M., Tran, K., Singh, S., Abrahamson, J.B., Jahn, C.E., Santoro, N., Naredo, E.B., Baraoidan, M., et al. "Cell wall composition and bioenergy potential of rice straw tissues are influenced by environment, tissue type, and genotype." BioEnergy Research 8, 1165–1182+ (2015). [DOI: 10.1007/s12155-014-9573-y]

Tiemann, L.K. & Grandy, S. "Mechanisms of soil carbon accrual and storage in bioenergy cropping systems." Global Change Biology – Bioenergy 7,2, 161–174+ (2015). [DOI: 10.1111/gcbb.12126]

Tiemann, L.K., Grandy, A.S., Atkinson, E.E., Marin-Spiotta, E. & McDaniel, M.D. "Crop rotational diversity enhances belowground communities and functions in an agroecosystem." Ecology Letters 18,8, 761–771+ (2015). [DOI: 10.1111/ele.12453]

Tjellström, H., Strawsine, M. & Ohlrogge, J.B. "Tracking synthesis and turnover of triacylglycerol in leaves." Journal of Experimental Botany 66,5, 1453–1461+ (2015). [DOI: 10.1093/jxb/eru500]