| Year | Publication | Keywords |
|---|---|---|
| 2021 | Liang, D. & Robertson, P. "Nitrification is a minor source of nitrous oxide (N2O) in agricultural landscapes and declines with increasing management intensity." Global Change Biology 27,21, 5599–5613+ (2021). [DOI: 10.1111/gcb.15833] |
Sustainability |
| 2021 | Liber, J.A., Bonito, G. & Benucci, G.M.N. "CONSTAX2: improved taxonomic classification of environmental DNA markers." Bioinformatics 37,21, 3941–3943+ (2021). [DOI: 10.1093/bioinformatics/btab347] |
Sustainability |
| 2021 | Linz, A.M., Ma, Y., Perez, J.M., Myers, K.S., Kontur, W.S., Noguera, D.R. & Donohue, T.J. "Aromatic dimer dehydrogenases from Novosphingobium aromaticivorans reduce monoaromatic diketones." Applied and Environmental Microbiology 87,24, e01742–21+ (2021). [DOI: 10.1128/AEM.01742-21] |
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| 2021 | Liu, X., Van Acker, R., Voorend, W., Pallidis, A., Goeminne, G., Pollier, J., Morreel, K., Kim, H., Muylle, H., Bosio, M., et al. "Rewired phenolic metabolism and improved saccharification efficiency of a Zea mays cinnamyl alcohol dehydrogenase 2 (zmcad2) mutant." The Plant Journal 105,5, 1240–1257+ (2021). [DOI: 10.1111/tpj.15108] |
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| 2021 | Lovell, J.T., MacQueen, A.H., Mamidi, S., Bonnette, J., Jenkins, J., Napier, J.D., Sreedasyam, A., Healey, A., Session, A., Shu, S., et al. "Genomic mechanisms of climate adaptation in polyploid bioenergy switchgrass." Nature 590, 438–444+ (2021). [DOI: 10.1038/s41586-020-03127-1] |
Feedstocks, Sustainability |
| 2021 | Lu, F., Wang, C., Chen, M. & Ralph, J. "A facile spectroscopic method for measuring lignin content in lignocellulosic biomass." Green Chemistry 23,14, 5106–5112+ (2021). [DOI: 10.1039/D1GC01507A] |
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| 2021 | Luo, H., Weeda, E.P., Alherech, M., Anson, C.W., Karlen, S.D., Cui, Y., Foster, C.E. & Stahl, S.S. "Oxidative catalytic fractionation of lignocellulosic biomass under non-alkaline conditions." Journal of the American Chemical Society 143,37, 15462–15470+ (2021). [DOI: 10.1021/jacs.1c08635] |
Deconstruction |
| 2021 | Ma, Y., Donohue, T.J. & Noguera, D.R. "Kinetic modeling of anaerobic degradation of plant-derived aromatic mixtures by Rhodopseudomonas palustris." Biodegradation 32,2, 179–192+ (2021). [DOI: 10.1007/s10532-021-09932-3] |
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| 2021 | Maestrini, B. & Basso, B. "Subfield crop yields and temporal stability in thousands of US Midwest fields." Precision Agriculture 22,6, 1749–1767+ (2021). [DOI: 10.1007/s11119-021-09810-1] |
Sustainability |
| 2021 | Martien, J.I., Trujillo, E.A., Jacobson, T.B., Tatli, M., Hebert, A.S., Stevenson, D.M., Coon, J.J. & Amador-Noguez, D. "Metabolic remodeling during nitrogen fixation in Zymomonas mobilis." mSystems 6,6, e00987–21+ (2021). [DOI: 10.1128/mSystems.00987-21] |
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| 2021 | McDaniel, E.A., Moya-Flores, F., Beach, N.K., Camejo, P.Y., Oyserman, B.O., Kizaric, M., Khor, E.H., Noguera, D.R. & McMahon, K.D. "Metabolic differentiation of co-occurring Accumulibacter clades revealed through genome-resolved metatranscriptomics." mSystems 6,4, e00474–21+ (2021). [DOI: 10.1128/mSystems.00474-21] |
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| 2021 | McDaniel, E.A., Wever, R., Oyserman, B.O., Noguera, D.R. & McMahon, K.D. "Genome-resolved metagenomics of a photosynthetic bioreactor performing biological nutrient removal." Microbiology Resource Announcements 10,18, e00244–21+ (2021). [DOI: 10.1128/MRA.00244-21] |
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| 2021 | Mosier, S., Córdova, C.S. & Robertson, P. "Restoring soil fertility on degraded lands to meet food, fuel, and climate security needs via perennialization." Frontiers in Sustainable Food Systems 5, 706142+ (2021). [DOI: 10.3389/fsufs.2021.706142] |
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| 2021 | Murphy, E.K., Mottiar, Y., Soolanayakanahally, R.Y. & Mansfield, S.D. "Variations in cell wall traits impact saccharification potential of Salix famelica and Salix eriocephala." Biomass & Bioenergy 148, 106051+ (2021). [DOI: 10.1016/j.biombioe.2021.106051] |
Feedstocks |
| 2021 | Myers, K.S., Noguera, D.R. & Donohue, T.J. "Promoter architecture differences among Alphaproteobacteria and other bacterial taxa." mSystems 6,4, e00526–21+ (2021). [DOI: 10.1128/mSystems.00526-21] |
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| 2021 | Myers, K.S., Place, M., Kominek, J., Noguera, D.R. & Donohue, T.J. "Delila-PY, a pipeline for utilizing the Delila suite of software to identify potential DNA binding motifs." Microbiology Resource Announcements 10,15, e00160–21+ (2021). [DOI: 10.1128/MRA.00160-21] |
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| 2021 | Nayfach, S., Roux, S., Seshadri, R., Udwary, D., Varghese, N., Schulz, F., Wu, D., Paez-Espino, D., Chen, I.-M., Huntemann, M., et al. "A genomic catalog of Earth’s microbiomes." Nature Biotechnology 39,4, 499–509+ (2021). [DOI: 10.1038/s41587-020-0718-6] |
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| 2021 | Ntana, F., Bhat, W.W., Johnson, S.R., Jorgensen, H.J.L., Collinge, D.B., Jensen, B. & Hamberger, B. "A sesquiterpene synthase from the endophytic fungus Serendipita indica catalyzes formation of viridiflorol." Biomolecules 11,6, 898+ (2021). [DOI: 10.3390/biom11060898] |
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| 2021 | O’Brien, C.E., Oliveira-Pacheco, J., Cinneide, E.O., Haase, M.A.B., Hittinger, C.T., Rogers, T.R., Zaragoza, O., Bond, U. & Butler, G. "Population genomics of the pathogenic yeast Candida tropicalis identifies hybrid isolates in environmental samples." PLOS Pathogens 17,3, e1009138+ (2021). [DOI: 10.1371/journal.ppat.1009138] |
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| 2021 | O’Neill, E.G. & Maravelias, C.T. "Towards integrated landscape design and biofuel supply chain optimization." Current Opinion in Chemical Engineering 31, 100666+ (2021). [DOI: 10.1016/j.coche.2020.100666] |
Sustainability |
| 2021 | Oates, N.C., Abood, A., Schirmacher, A.M., Alessi, A.M., Bird, S.M., Bennett, J.P., Leadbeater, D.R., Li, Y., Dowle, A.A., Liu, S., et al. "A multi-omics approach to lignocellulolytic enzyme discovery reveals a new ligninase activity from Parascedosporium putredinis NO1." Proceedings of the National Academy of Sciences of the United States of America 118,18, e2008888118+ (2021). [DOI: 10.1073/pnas.2008888118] |
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| 2021 | Oliver, J., Fan, M., McKinley, B., Zemelis-Durfee, S., Brandizzi, F., Wilkerson, C. & Mullet, J.E. "The AGCVIII kinase Dw2 modulates cell proliferation, endomembrane trafficking, and MLG/xylan cell wall localization in elongating stem internodes of Sorghum bicolor." The Plant Journal 105,4, 1053–1071+ (2021). [DOI: 10.1111/tpj.15086] |
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| 2021 | Ostrom, P.H., DeCamp, S., Gandhi, H., Haslun, J. & Ostrom, N.E. "The influence of tillage and fertilizer on the flux and source of nitrous oxide with reference to atmospheric variation using laser spectroscopy." Biogeochemistry 152, 143–159+ (2021). [DOI: 10.1007/s10533-020-00742-y] |
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| 2021 | Perez, J.M., Kontur, W.S., Gehl, C., Gille, D.M., Ma, Y., Niles, A.V., Umana, G., Donohue, T.J. & Noguera, D.R. "Redundancy in aromatic O-demethylation and ring opening reactions in Novosphingobium aromaticivorans and their impact in the metabolism of plant derived phenolics." Applied and Environmental Microbiology 87,8, e02794–20+ (2021). [DOI: 10.1128/AEM.02794-20] |
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| 2021 | Reed, D.E., Poe, J., Abraha, M., Dahlin, K.M. & Chen, J. "Modeled surface-atmosphere fluxes from paired sites in the Upper Great Lakes Region using neural networks." JGR Biogeosciences 126,8, e2021JG006363+ (2021). [DOI: 10.1029/2021JG006363] |
Sustainability |
