Publications

James, L.K., Swinton, S.M. & Pennington, D. Profitability of converting to biofuel crops Extension Bulletin. vol. E-3084 https://lter.kbs.msu.edu/wp-content/uploads/2012/06/Profitability-of-Converting-to-Biofuel-Crops.pdf (2009)

Jeffries, T.W. & Van Vleet, J.R. "Pichia stipitis genomics, transcriptomics, and gene clusters." FEMS Yeast Research 9,6, 793–807+ (2009). [DOI: 10.1111/j.1567-1364.2009.00525.x]

Jha, M., Babcock, B.A., Gassman, P.W. & Kling, C.L. "Economic and environmental impacts of alternative energy crops." International Agricultural Engineering Journal 18,3-4, 15–23+ (2009).

Jiang, Y. & Swinton, S.M. Market interactions, farmer choices, and the sustainability of growing advanced biofuels Michigan State University, Department of Agricultural, Food, and Resource Economics. http://ageconsearch.umn.edu/handle/43634 (2009)

Jiang, Y. & Swinton, S.M. "Market interactions, farmers’ choices, and the sustainability of growing advanced biofuels: a missing perspective?" International Journal of Sustainable Development & World Ecology 16,6, 438 – 450+ (2009). [DOI: 10.1080/13504500903336405]

Kim, H., Kim, S. & Dale, B.E. "Biofuels, land use change, and greenhouse gas emissions: some unexplored variables." Environmental Science & Technology 43,3, 961–967+ (2009). [DOI: 10.1021/es802681k]

Kim, S. & Dale, B. "Regional variations in greenhouse gas emissions of biobased products in the United States—corn-based ethanol and soybean oil." The International Journal of Life Cycle Assessment 14,6, 540–546+ (2009). [DOI: 10.1007/s11367-009-0106-4]

Ko, J.-H., Kim, W.-C. & Han, K.-H. "Ectopic expression of MYB46 identifies transcriptional regulatory genes involved in secondary wall biosynthesis in Arabidopsis." The Plant Journal 60,4, 649–65+ (2009). [DOI: 10.1111/j.1365-313X.2009.03989.x]

Kumar, M., Thammannagowda, S., Bulone, V., Chiang, V., Han, K.-H., Joshi, C.P., Mansfield, S.D., Mellerowicz, E., Sundberg, B., Teeri, T., et al. "An update on the nomenclature for the cellulose synthase genes in Populus." Trends in Plant Science 14,5, 248–54+ (2009). [DOI: 10.1016/j.tplants.2009.02.004]

Kumar, R., Mago, G., Balan, V. & Wyman, C.E. "Physical and chemical characterizations of corn stover and poplar solids resulting from leading pretreatment technologies." Bioresource Technology 100,17, 3948–62+ (2009). [DOI: 10.1016/j.biortech.2009.01.075]

Kunkes, E.L., Gürbüz, E.I. & Dumesic, J.A. "Vapor-phase C-C coupling reactions of biomass-derived oxygenates over Pd/CeZrOx catalysts." Journal of Catalysis 266, 236–249+ (2009). [DOI: 10.1016/j.jcat.2009.06.014]

Landis, D.A. Sustainability of biofuels: Future research opportunities; Report from the October 2008 workshop, DOE/SC-0114 https://genomicscience.energy.gov/sustainability-of-biofuels/ (2009)

Laser, M., Jin, H., Jayawardhana, K., Dale, B.E. & Lynd, L.R. "Projected mature technology scenarios for conversion of cellulosic biomass to ethanol with coproduction thermo-chemical fuels, power, and/or animal feed protein." Biofuels, Bioproducts and Biorefining 3, 231–246+ (2009). [DOI: 10.1002/bbb.131]

Laser, M., Larson, E., Dale, B.E., Wang, M., Greene, N. & Lynd, L.R. "Comparative analysis of efficiency, environmental impact, and process economics for mature biomass refining scenarios." Biofuels, Bioproducts and Biorefining 3, 247–270+ (2009). [DOI: 10.1002/bbb.136]

Lau, M., Gunawan, C. & Dale, B. "The impacts of pretreatment on the fermentability of pretreated lignocellulosic biomass: a comparative evaluation between ammonia fiber expansion and dilute acid pretreatment." Biotechnology for Biofuels 2,1, 30+ (2009). [DOI: 10.1189/1754-6834-2-30]

Lau, M.W. & Dale, B.E. "Cellulosic ethanol production from AFEX-treated corn stover using Saccharomyces cerevisiae 424A(LNH-ST)." Proceedings of the National Academy of Sciences of the United States of America 106,5, 1368–1373+ (2009). [DOI: 10.1073/pnas.0812364106]

Liang, C., Pedersen, J.A. & Balser, T.C. "Aminoglycoside antibiotics may interfere with microbial amino sugar analysis." Journal of Chromatography A 1216,27, 5296–5301+ (2009). [DOI: 10.1016/j.chroma.2009.05.010]

Lorenz, A.J., Anex, R.P., Isci, A., Coors, J.G., de Leon, N. & Weimer, P.J. "Forage quality and composition measurements as predictors of ethanol yield from maize (Zea mays L.) stover." Biotechnology for Biofuels 2,1, 5+ (2009). [DOI: 10.1186/1754-6834-2-5]

Lorenz, A.J., Coors, J.G., de Leon, N., Wolfrum, E.J., Hames, B.R., Sluiter, A.D. & Weimer, P.J. "Characterization, genetic variation, and combining ability of maize traits relevant to the production of cellulosic ethanol." Crop Science 49,1, 85–98+ (2009). [DOI: 10.2135/cropsci2008.06.0306]

Lynd, L.R., Larson, E., Greene, N., Laser, M., Sheehan, J., Dale, B.E., McLaughlin, S. & Wang, M. "The role of biomass in America’s energy future: framing the analysis." Biofuels, Bioproducts and Biorefining 3, 113–123+ (2009). [DOI: 10.1002/bbb.134]

Marner, W.D., II. "Practical application of synthetic biology principles." Biotechnology Journal 4,10, 1406–19+ (2009). [DOI: 10.1002/biot.200900167 []

Nagendran, S., Hallen-Adams, H.E., Paper, J.M., Aslam, N. & Walton, J.D. "Reduced genomic potential for secreted plant cell-wall-degrading enzymes in the ectomycorrhizal fungus Amanita bisporigera, based on the secretome of Trichoderma reesei." Fungal Genetics and Biology 46,5, 427–35+ (2009). [DOI: 10.1016/j.fgb.2009.02.001]

Ohlrogge, J., Allen, D., Berguson, B., DellaPenna, D., Shachar-Hill, Y. & Stymne, S. "Driving on biomass." Science 324,5930, 1019–1020+ (2009). [DOI: 10.1126/science.1171740]

Phillips, G.N. "Describing protein conformational ensembles: beyond static snapshots." F1000 Biology Reports 1, 38–41+ (2009). [DOI: 10.3410/B1-38]

Pinto-Tomas, A.A., Anderson, M.A., Suen, G., Stevenson, D.M., Chu, F.S.T., Cleland, W., Weimer, P.J. & Currie, C.R. "Symbiotic nitrogen fixation in the fungus gardens of leaf-cutter ants." Science 326,5956, 1120–1123+ (2009). [DOI: 10.1126/science.1173036]