Publications

When it comes to interdisciplinary collaboration, the titles of GLBRC publications speak for themselves. Each new year of operation has seen more publications from multiple labs that span our research themes, accelerating the Center's production of the basic research that generates technology to convert cellulosic biomass to advanced biofuels and bioproducts.

Year	Publication	Keywords
2015	Gelfand, I. & Robertson, P. "A reassessment of the contribution of soybean biological nitrogen fixation to reactive N in the environment." Biogeochemistry 123, 175-184+ (2015). [DOI: 10.1007/s10533-014-0061-4] DOI Google Scholar	Sustainability
2015	Grabber, J.H., Santoro, N., Foster, C.E., Elumalai, S., Ralph, J. & Pan, X. "Incorporation of flavonoid derivatives or pentagalloyl glucose into lignin enhances cell wall saccharification following mild alkaline or acidic pretreatments." BioEnergy Research 8, 1391-1400+ (2015). [DOI: 10.1007/s12155-015-9605-2] DOI Google Scholar	Feedstocks
2015	Gratton, C., Casler, M.D., Groves, R. & Kim, T.N. "Insecticide applications have minor effects on switchgrass biomass yield." Agronomy Journal 107,6, 2031-2037+ (2015). [DOI: 10.2134/agronj15.0066] DOI Google Scholar	Sustainability
2015	Groendyk, M.A. & Rothamer, D.A. "Effects of fuel physical properties on auto-ignition characteristics in a heavy duty compression ignition engine." SAE International Journal of Fuels and Lubricants 8,1, 200-213+ (2015). [DOI: 10.4271/2015-01-0952] DOI Google Scholar	Conversion
2015	GuzzodeCarliPoelking, V., Giordano, A., Ricci-Silva, M.E., Williams, T.C.R., Pecanha, D.A., Ventrella, M.C., Rencoret, J., Ralph, J., Barbosa, M.H.P. & Loureiro, M. "Analysis of a modern hybrid and an ancient sugarcane implicates a complex interplay of factors in affecting recalcitrance to cellulosic ethanol production." PLOS ONE 10,8, (2015). [DOI: 10.1371/journal.pone.0134964] DOI Google Scholar	Feedstocks
2015	Haase, N.J., Bessinger, T., Hirsch, C.N., Vaillancourt, B., Deshpande, S., Barry, K., Buell, R., Kaeppler, S.M. & de Leon, N. "Shared genomic regions between derivatives of a large segregating population of maize identified using bulked segregant analysis sequencing and traditional linkage analysis." G3: Genes \| Genomes \| Genetics 5,8, 1593-1602+ (2015). [DOI: 10.1534/g3.115.017665] DOI Google Scholar	Feedstocks
2015	Hamilton, S.K., Hussain, M.Z., Bhardwaj, A.K., Basso, B. & Robertson, P. "Comparative water use by maize, perennial crops, restored prairie, and poplar trees in the US Midwest." Environmental Research Letters 10,6, 064015+ (2015). [DOI: 10.1088/1748-9326/10/6/064015] DOI Google Scholar	Sustainability
2015	Han, J., Luterbacher, J.S., Alonso, D.M., Dumesic, J.A. & Maravelias, C.T. "A lignocellulosic ethanol strategy via nonenzymatic sugar production: process synthesis and analysis." BioresourceTechnology 182, 258-266+ (2015). [DOI: 10.1016/j.biortech.2015.01.135] DOI Google Scholar	Deconstruction, Conversion
2015	Han, J., Sen, M., Luterbacher, J.S., Alonso, D.M., Dumesic, J.A. & Maravelias, C.T. "Process systems engineering studies for the synthesis of catalytic biomass-to-fuels strategies." Computers & Chemical Engineering 81,4, 57-69+ (2015). [DOI: 10.1016/j.compchemeng.2015.04.007] DOI Google Scholar	Deconstruction, Conversion
2015	Heckwolf, S., Heckwolf, M., Kaeppler, S.M., de Leon, N. & Spalding, E.P. "Image analysis of anatomical traits in stalk transections of maize and other grasses." Plant Methods 11, 26+ (2015). [DOI: 10.1186/s13007-015-0070-x] DOI Google Scholar	Feedstocks
2015	Hittinger, C.T., Rokas, A., Bai, F.-Y., Boekhout, T., Goncalves, P., Jeffries, T.W., Kominek, J., Lachance, M.-A., Libkind, D., Rosa, C.A., et al. "Genomics and the making of yeast biodiversity." Current Opinion in Genetics and Development 35, 100-109+ (2015). [DOI: 10.1016/j.gde.2015.10.008] DOI Google Scholar	Conversion
2015	Hose, J., Yong, C.M., Sardi, M., Wang, Z., Newton, M.A. & Gasch, A.P. "Dosage compensation can buffer copy-number variation in wild yeast." eLife 4, (2015). [DOI: 10.7554/eLife.05462] DOI Google Scholar	Conversion
2015	Imam, S., Noguera, D.R. & Donohue, T.J. "An integrated approach to reconstructing genome-scale transcriptional regulatory networks." PLOS Computational Biology 11,2, (2015). [DOI: 10.1371/journal.pcbi.1004103] DOI Google Scholar	Conversion
2015	Imam, S., Noguera, D.R. & Donohue, T.J. "CceR and AkgR regulate central carbon and energy metabolism in alphaproteobacteria." mBio 6,1, (2015). [DOI: 10.1128/mBio.02461-14] DOI Google Scholar	Conversion
2015	Jach-Smith, L.C. & Jackson, R.D. "Nitrogen conservation decreases with fertilizer addition in two perennial grass cropping systems for bioenergy." Agriculture, Ecosystems & Environment 204, 62-71+ (2015). [DOI: 10.1016/j.agee.2015.02.006] DOI Google Scholar	Sustainability
2015	Kallenbach, C.M. & Grandy, S. "Land-use legacies regulate decomposition dynamics following bioenergy crop conversion." Global Change Biology – Bioenergy 7,6, 1232-1244+ (2015). [DOI: 10.1111/gcbb.12218] DOI Google Scholar	Sustainability
2015	Kallenbach, C.M., Grandy, A.S., Frey, S.D. & Diefendorf, A.F. "Microbial physiology and necromass regulate agricultural soil carbon accumulation." Soil Biology and Biochemistry 91, 279-290+ (2015). [DOI: 10.1016/j.soilbio.2015.09.005] DOI Google Scholar	Sustainability
2015	Kilaru, A., Cao, X., Dabbs, P.B., Sung, H.-J., Rahman, M.M., Thrower, N., Zynda, G., Podicheti, R., Ibarra-Laclette, E., Herrera-Estrella, L., et al. "Oil biosynthesis in a basal angiosperm: transcriptome analysis of Persea Americana mesocarp." BMC Plant Biology 15, 203+ (2015). [DOI: 10.1186/s12870-015-0586-2] DOI Google Scholar	Feedstocks
2015	Kim, S. & Dale, B.E. "Comparing alternative cellulosic biomass biorefining systems: centralized versus distributed processing systems." Biomass and Bioenergy 74, 135-147+ (2015). [DOI: 10.1016/j.biombioe.2015.01.018] DOI Google Scholar	Sustainability
2015	Kim, S. & Dale, B.E. "All biomass is local: the cost, volume produced, and global warming impact of cellulosic biofuels depend strongly on logistics and local conditions." Biofuels, Bioproducts and Biorefining 9, 422-434+ (2015). [DOI: 10.1002/bbb.1554] DOI Google Scholar	Sustainability
2015	Kim, S.-J., Held, M.A., Zemelis, S., Wilkerson, C. & Brandizzi, F. "CGR2 and CGR3 have critical overlapping roles in pectin methylesterification and plant growth in Arabidopsis thaliana." The Plant Journal 82,2, 208-220+ (2015). [DOI: 10.1111/tpj.12802] DOI Google Scholar	Feedstocks
2015	Kim, S.-J., Zemelis, S., Keegstra, K. & Brandizzi, F. "The cytoplasmic localization of the catalytic site of CSLF6 supports a channeling model for the biosynthesis of mixed-linkage glucan." The Plant Journal 81,4, 537-547+ (2015). [DOI: 10.1111/tpj.12748] DOI Google Scholar	Feedstocks
2015	Kong, Y., Pena, M.J., Renna, L., Avci, U., Pattathil, S., Tuomivaara, S.T., Li, X., Reiter, W.-D., Brandizzi, F., Hahn, M.G., et al. "Galactose-depleted xyloglucan is dysfunctional and leads to dwarfism in Arabidopsis." Plant Physiology 167,4, 1296-1306+ (2015). [DOI: 10.1104/pp.114.255943] DOI Google Scholar	Feedstocks
2015	Kravchenko, A.N. & Robertson, P. "Statistical challenges in analyses of chamber-based soil CO2 and N2O emissions data." Soil Science Society of America Journal 79,1, 200-211+ (2015). [DOI: 10.2136/sssaj2014.08.0325] DOI Google Scholar	Sustainability
2015	Lan, W., Lu, F., Regner, M., Zhu, Y., Rencoret, J., Ralph, S.A., Zakai, U.I., Morreel, K., Boerjan, W. & Ralph, J. "Tricin, a flavonoid monomer in monocot lignification." Plant Physiology 167,4, 1284-1295+ (2015). [DOI: 10.1104/pp.114.253757] DOI Google Scholar	Feedstocks