Publications

When it comes to interdisciplinary collaboration, the titles of GLBRC publications speak for themselves. Each new year of operation has seen more publications from multiple labs that span our research themes, accelerating the Center's production of the basic research that generates technology to convert cellulosic biomass to advanced biofuels and bioproducts.

Year	Publication	Keywords
2021	Robinson, D.E., Place, M., Hose, J., Jochem, A. & Gasch, A.P. "Natural variation in the consequences of gene overexpression and its implications for evolutionary trajectories." eLife 10, (2021). [DOI: 10.7554/eLife.70564] DOI Google Scholar
2021	Roley, S.S., Ulbrich, T.C. & Robertson, P. "Nitrogen fixation and resorption efficiency differences among twelve upland and lowland switchgrass cultivars." Phytobiomes Journal 5,1, 97-107+ (2021). [DOI: 10.1094/PBIOMES-11-19-0064-FI] DOI Google Scholar
2021	Ryu, J. & Maravelias, C.T. "A generalized distillation network synthesis model." Chemical Engineering Science 244, 116766+ (2021). [DOI: 10.1016/j.ces.2021.116766] DOI Google Scholar	Deconstruction, Sustainability
2021	Saha, D., Basso, B. & Robertson, P. "Machine learning improves predictions of agricultural nitrous oxide (N2O) emissions from intensively managed cropping systems." Environmental Research Letters 16,2, 024004+ (2021). [DOI: 10.1088/1748-9326/abd2f3] DOI Google Scholar	Sustainability
2021	Saha, P., Lin, F., Thibivilliers, S., Xiong, Y., Pan, C. & Bartley, L.E. "Phenylpropanoid biosynthesis gene expression precedes lignin accumulation during shoot cevelopment in lowland and upland switchgrass genotypes." Frontiers in Plant Science 12, 640930+ (2021). [DOI: 10.3389/fpls.2021.640930] DOI Google Scholar
2021	Schulte, L.A., Dale, B.E., Bozzetto, S., Liebman, M., Souza, G.M., Haddad, N., Richard, T.L., Brown, R.C., Hilbert, J.A. & Arbuckle, G. "Meeting global challenges with regenerative agriculture producing food and energy." Nature Sustainability 5, 384-388+ (2021). [DOI: 10.1038/s41893-021-00827-y] DOI Google Scholar	Sustainability
2021	Shirkey, G., Belongeay, M., Wu, S., Ma, X., Tavakol-Davani, H., Anctil, A., Marquart-Pyatt, S., Stewart, R.A., Sinha, P., Corkish, R., et al. "An environmental and societal analysis of the US electrical energy industry based on the water–energy nexus." Energies 14,9, 2633+ (2021). [DOI: 10.3390/en14092633] DOI Google Scholar	Sustainability
2021	Smercina, D.N., Bowsher, A.W., Evans, S.E., Friesen, M.L., Eder, E.K., Hoyt, D.W. & Tiemann, L.K. "Switchgrass rhizosphere metabolite chemistry driven by nitrogen availability." Phytobiomes Journal 5,1, 88-96+ (2021). [DOI: 10.1094/PBIOMES-09-19-0055-FI] DOI Google Scholar	Sustainability
2021	Smercina, D.N., Evans, S.E., Friesen, M.L. & Tiemann, L.K. "Temporal dynamics of free-living nitrogen fixation in the switchgrass rhizosphere." Global Change Biology – Bioenergy 13,11, 1814-1830+ (2021). [DOI: 10.1111/gcbb.12893] DOI Google Scholar	Sustainability
2021	Smith, R.A., Cass, C.L., Petrik, D.L., Padmakshan, D., Ralph, J., Sedbrook, J.C. & Karlen, S.D. "Stacking AsFMT overexpression with BdPMT loss of function enhances monolignol ferulate production in Brachypodium distachyon." Plant Biotechnology Journal 19,9, 1878-1886+ (2021). [DOI: 10.1111/pbi.13606] DOI Google Scholar	Feedstocks
2021	Spawn-Lee, S.A., Lark, T.J., Gibbs, H.K., Houghton, R.A., Kucharik, C.J., Malins, C., Pelton, R.E.O. & Robertson, P. "Comment on ‘Carbon Intensity of corn ethanol in the United States: state of the science’." Environmental Research Letters 16,11, 118001+ (2021). [DOI: 10.1088/1748-9326/ac2e35] DOI Google Scholar
2021	Speers, A.M. & Reguera, G. "Competitive advantage of oxygen-tolerant bioanodes of Geobacter sulfurreducens in bioelectrochemical systems." Biofilm 3, 100052+ (2021). [DOI: 10.1016/j.bioflm.2021.100052] DOI Google Scholar	Conversion
2021	Swinton, S.M., Dulys, F. & Klammer, S.S.H. "Why biomass residue is not as plentiful as it looks: case study on economic supply of logging residues." Applied Economic Perspectives and Policy 43,3, 1003-1025+ (2021). [DOI: 10.1002/aepp.13067] DOI Google Scholar	Sustainability
2021	Takahashi, D., Willick, I.R., Kasuga, J. & Livingston, D.P. "Responses of the plant cell wall to sub-zero temperatures: a brief update." Plant and Cell Physiology 62,12, 1858-1866+ (2021). [DOI: 10.1093/pcp/pcab103] DOI Google Scholar
2021	Tetreault, H.M., Gries, T., Liu, S., Toy, J., Xin, Z., Vermerris, W., Ralph, J., Funnell-Harris, D.L. & Sattler, S.E. "The sorghum (Sorghum bicolor) brown midrib 30 gene encodes a chalcone isomerase required for cell wall lignification." Frontiers in Plant Science 12, 732307+ (2021). [DOI: 10.3389/fpls.2021.732307] DOI Google Scholar
2021	Tilhou, N.W. & Casler, M.D. "Subsampling and DNA pooling can increase gains through genomic selection in switchgrass." The Plant Genome 14,3, (2021). [DOI: 10.1002/tpg2.20149] DOI Google Scholar
2021	Ulbrich, T.C., Friesen, M., Roley, S.S., Tiemann, L.K. & Evans, S.E. "Intraspecific variability in root traits and edaphic conditions influence soil microbiomes across 12 switchgrass cultivars." Phytobiomes Journal 5,1, 108-120+ (2021). [DOI: 10.1094/pbiomes-12-19-0069-fi] DOI Google Scholar	Sustainability
2021	Wang, P., Meng, F., Moore, B.M. & Shiu, S.-H. "Impact of short-read sequencing on the misassembly of a plant genome." BMC Genomics 22,1, 99+ (2021). [DOI: 10.1186/s12864-021-07397-5] DOI Google Scholar	Sustainability
2021	Wang, P., Moore, B.M., Uygun, S., Lehti-Shiu, M.D., Barry, C.S. & Shiu, S.-H. "Optimising the use of gene expression data to predict plant metabolic pathway memberships." New Phytologist 231, 475-489+ (2021). [DOI: 10.1111/nph.17355] DOI Google Scholar
2021	Xie, Y., Gibbs, H.K. & Lark, T.J. "Landsat-based Irrigation Dataset (LANID): 30 m resolution maps of irrigation distribution, frequency, and change for the US, 1997–2017." Earth System Science Data 13,12, 5689-5710+ (2021). [DOI: 10.5194/essd-13-5689-2021] DOI Google Scholar	Sustainability
2021	Xie, Y. & Lark, T.J. "Mapping annual irrigation from Landsat imagery and environmental variables across the conterminous United States." Remote Sensing of Environment 260, 112445+ (2021). [DOI: 10.1016/j.rse.2021.112445] DOI Google Scholar	Sustainability
2021	Yu, K.M.J., McKinley, B., Rooney, W.L. & Mullet, J.E. "High planting density induces the expression of GA3-oxidase in leaves and GA mediated stem elongation in bioenergy sorghum." Scientific Reports 11,1, 46+ (2021). [DOI: 10.1038/s41598-020-79975-8] DOI Google Scholar
2021	Yue, F., Lan, W., Zhang, L., Lu, F., Sun, R. & Ralph, J. "Efficient synthesis of pinoresinol, an important lignin dimeric model compound." Frontiers in Energy Research 9, 640337+ (2021). [DOI: 10.3389/fenrg.2021.640337] DOI Google Scholar
2021	Yurkov, A., Alves, A., Bai, F.-Y., Boundy-Mills, K., Buzzini, P., Cadez, N., Cardinali, G., Casaregola, S., Chaturvedi, V., Collin, V., et al. "Nomenclatural issues concerning cultured yeasts and other fungi: why it is important to avoid unneeded name changes." IMA Fungus 12,1, 18+ (2021). [DOI: 10.1186/s43008-021-00067-x] DOI Google Scholar
2021	Zhalnina, K., Hawkes, C., Shade, A., Firestone, M.K. & Pett-Ridge, J. "Managing plant microbiomes for sustainable biofuel production." Phytobiomes Journal 5,1, 3-13+ (2021). [DOI: 10.1094/PBIOMES-12-20-0090-E] DOI Google Scholar