Publications

When it comes to interdisciplinary collaboration, the titles of GLBRC publications speak for themselves. Each new year of operation has seen more publications from multiple labs that span our research themes, accelerating the Center's production of the basic research that generates technology to convert cellulosic biomass to advanced biofuels and bioproducts.

Year	Publication	Keywords
2016	Horn, P.J. & Benning, C. "The plant lipidome in human and environmental health." Science 353,6305, 1228-1232+ (2016). [DOI: 10.1126/science.aaf6206] DOI Google Scholar	Feedstocks
2016	Horn, P.J., Liu, J., Cocuron, J.-C., McGlew, K., Thrower, N.A., Larson, M., Lu, C., Alonso, A.P. & Ohlrogge, J. "Identification of multiple lipid genes with modifications in expression and sequence associated with the evolution of hydroxy fatty acid accumulation in Physaria fendleri." The Plant Journal 86, 322-348+ (2016). [DOI: 10.1111/tpj.13163] DOI Google Scholar	Feedstocks
2016	Jin, M., Sousa, L. da C., Schwartz, C., He, Y., Sarks, C., Gunawan, C., Balan, V. & Dale, B.E. "Toward lower cost cellulosic biofuel production using ammonia based pretreatment technologies." Green Chemistry 18,4, 957-966+ (2016). [DOI: 10.1039/c5gc02433a] DOI Google Scholar	Deconstruction
2016	Kallenbach, C.M., Frey, S.D. & Grandy, S. "Direct evidence for microbial-derived soil organic matter formation and its ecophysiological controls." Nature Communications 7, 13630+ (2016). [DOI: 10.1038/ncomms13630] DOI Google Scholar	Sustainability
2016	Kang, J.-H., Campos, M.L., Zemelis-Durfee, S., Al-Haddad, J.M., Jones, D., Telewski, F.W., Brandizzi, F. & Howe, G.A. "Molecular cloning of the tomato Hairless gene implicates actin dynamics in trichome-mediated defense and mechanical properties of stem tissue." Journal of Experimental Botany 67,18, 5313-5324+ (2016). [DOI: 10.1093/jxb/erw292] DOI Google Scholar	Feedstocks
2016	Karlen, S.D., Zhang, C., Peck, M.L., Smith, R.A., Padmakshan, D., Helmich, K.E., Free, H.C.A., Lee, S., Smith, B.G., Lu, F., et al. "Monolignol-ferulate conjugates are naturally incorporated into plant lignins." Science Advances 2, (2016). [DOI: 10.1126/sciadv.1600393] DOI Google Scholar	Feedstocks
2016	Khadempour, L., Burnum-Johnson, K.E., Baker, E.S., Nicora, C.D., Webb-Robertson, B.-J.M., White, R.A., Monroe, M.E., Huang, E.L., Smith, R.D. & Currie, C.R. "The fungal cultivar of leaf-cutter ants produces specific enzymes in response to different plant substrates." Molecular Ecology 25,22, 5795-5805+ (2016). [DOI: 10.1111/mec.13872] DOI Google Scholar	Deconstruction
2016	Kim, S. & Dale, B.E. "A distributed cellulosic biorefinery system in the US Midwest based on corn stover." Biofuels, Bioproducts and Biorefining 10,6, 819-832+ (2016). [DOI: 10.1002/bbb.1712] DOI Google Scholar	Deconstruction
2016	Kim, S.-J. & Brandizzi, F. "The plant secretory pathway for the trafficking of cell wall polysaccharides and glycoproteins." Glycobiology 26,9, 940-949+ (2016). [DOI: 10.1093/glycob/cww044] DOI Google Scholar	Feedstocks
2016	Kong, L., Sen, M., Henao, C.A., Dumesic, J.A. & Maravelias, C.T. "A superstructure-based framework for simultaneous process synthesis, heat integration, and utility plant design." Computers & Chemical Engineering 91, 68-84+ (2016). [DOI: 10.1016/j.compchemeng.2016.02.013] DOI Google Scholar	Deconstruction
2016	Kuang, M.C., Hutchins, P.D., Russell, J.D., Coon, J.J. & Hittinger, C.T. "Ongoing resolution of duplicate gene functions shapes the diversification of a metabolic network." eLife 5, (2016). [DOI: 10.7554/eLife.19027] DOI Google Scholar	Conversion
2016	Kumar, R., Singh, S. & Balan, V. Valorization of lignocellulosic biomass in a biorefinery: from logistics to environmental and performance impact Biochemistry Research Trends. (Nova Publishers, 2016). Google Scholar	Deconstruction
2016	Lacroix, C., Renner, K., Cole, E., Seabloom, E.W., Borer, E.T. & Malmstrom, C.M. "Methodological guidelines for accurate detection of viruses in wild plant species." Applied and Environmental Microbiology 82,6, 1966-1975+ (2016). [DOI: 10.1128/aem.03538-15] DOI Google Scholar	Sustainability
2016	Lan, W., Morreel, K., Lu, F., Rencoret, J., del Río, J.C., Voorend, W., Vermerris, W., Boerjan, W. & Ralph, J. "Maize tricin-oligolignol metabolites and their implications for monocot lignification." Plant Physiology 171,2, 810-820+ (2016). [DOI: 10.1104/pp.16.02012] DOI Google Scholar	Feedstocks
2016	Lan, W., Rencoret, J., Lu, F., Karlen, S.D., Smith, B.G., Harris, P.J., del Río, J.C. & Ralph, J. "Tricin-lignins: occurrence and quantitation of tricin in relation to phylogeny." The Plant Journal 88,6, 1046-1057+ (2016). [DOI: 10.1111/tpj.13315] DOI Google Scholar	Feedstocks
2016	Leducq, J.-B., Nielly-Thibault, L., Charron, G., Eberlein, C., Verta, J.-P., Samani, P., Sylvester, K., Hittinger, C.T., Bell, G. & Landry, C.R. "Speciation driven by hybridization and chromosomal plasticity in a wild yeast." Nature Microbiology 1, 15003+ (2016). [DOI: 10.1038/nmicrobiol.2015.3] DOI Google Scholar	Conversion
2016	Lewin, G.R., Carlos, C., Chevrette, M.G., Horn, H.A., McDonald, B.R., Stankey, R.J., Fox, B.G. & Currie, C.R. "Evolution and ecology of Actinobacteria and their bioenergy applications." Annual Review of Microbiology 70, 235-254+ (2016). [DOI: 10.1146/annurev-micro-102215-095748] DOI Google Scholar	Deconstruction
2016	Lewin, G.R., Johnson, A.L., Soto, R.D., Perry, K., Book, A.J., Horn, H.A., Pinto-Tomas, A.A. & Currie, C.R. "Cellulose-enriched microbial communities from leaf-cutter ant (Atta colombica) refuse dumps vary in taxonomic composition and degradation ability." PLOS ONE 11,3, (2016). [DOI: 10.1371/journal.pone.0151840] DOI Google Scholar	Deconstruction
2016	Liang, C., Jesus, E. da C., Duncan, D.S., Quensen, J.F., Jackson, R.D., Balser, T.C. & Tiedje, J.M. "Switchgrass rhizospheres stimulate microbial biomass but deplete microbial necromass in agricultural soils of the upper Midwest, USA." Soil Biology and Biochemistry 94, 173-180+ (2016). [DOI: 10.1016/j.soilbio.2015.11.020] DOI Google Scholar	Sustainability
2016	Liang, C., Kao-Kniffin, J., Sanford, G.R., Wickings, K., Balser, T.C. & Jackson, R.D. "Microorganisms and their residues under restored perennial grassland communities of varying diversity." Soil Biology and Biochemistry 103, 192-200+ (2016). [DOI: 10.1016/j.soilbio.2016.08.002] DOI Google Scholar	Sustainability
2016	Lopes, M.R., Morais, C.G., Kominek, J., Cadete, R.M., Soares, M.A., Uetanabaro, A.P.T., Fonseca, C., Lachance, M.-A., Hittinger, C.T. & Rosa, C.A. "Genomic analysis and D-xylose fermentation of three novel Spathaspora species: Spathaspora girioi sp. nov., Spathaspora Hagerdaliae f. a., sp. nov. and Spathaspora gorwiae f. a., sp. nov." FEMS Yeast Research 16,4, (2016). [DOI: 10.1093/femsyr/fow044] DOI Google Scholar	Conversion
2016	Luo, D., Callari, R., Hamberger, B., Wubshet, S.G., Nielsen, M.T., Andersen-Ranberg, J., Hallström, B.M., Cozzi, F., Heider, H., Møller, B.L., et al. "Oxidation and cyclization of casbene in the biosynthesis of Euphorbia factors from mature seeds of Euphorbia lathyris L." Proceedings of the National Academy of Sciences of the United States of America 113,34, (2016). [DOI: 10.1073/pnas.1607504113] DOI Google Scholar	Feedstocks
2016	Ma, W., Kong, Q., Mantyla, J.J., Yang, Y., Ohlrogge, J.B. & Benning, C. "14-3-3 protein mediates plant seed oil biosynthesis through interaction with AtWRI1." The Plant Journal 88,2, 228-235+ (2016). [DOI: 10.1111/tpj.13244] DOI Google Scholar	Feedstocks
2016	McAndrew, R.P., Sathitsuksanoh, N., Mbughuni, M.M., Heins, R.A., Pereira, J.H., George, A., Sale, K.L., Fox, B.G., Simmons, B.A. & Adams, P.D. "Structure and mechanism of NOV1, a resveratrol-cleaving dioxygenase." Proceedings of the National Academy of Sciences of the United States of America 113,50, 14324-14329+ (2016). [DOI: 10.1073/pnas.1608917113] DOI Google Scholar	Deconstruction
2016	McCormick, R.F., Truong, S.K. & Mullet, J.E. "3D sorghum reconstructions from depth images identify QTL regulating shoot architecture." Plant Physiology 172,2, 823-834+ (2016). [DOI: 10.1104/pp.16.00948] DOI Google Scholar	Feedstocks