| Year | Publication | Keywords |
|---|---|---|
| 2024 | Metz, F., Myers, K.S., Lu, F., Noguera, D.R. & Donohue, T.J. "Transcriptomic data sets for Novosphingobium aromaticivorans grown with the β-5-linked aromatic dimer dehydrodiconiferyl alcohol and the related G-aromatic monomers vanillin and ferulic acid." Microbiology Resource Announcements 13,11, e00845–24+ (2024). [DOI: 10.1128/mra.00845-24] |
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| 2024 | Metz, F., Olsen, A.M., Lu, F., Myers, K.S., Allemann, M.N., Michener, J.K., Noguera, D.R. & Donohue, T.J. "Catabolism of β-5 linked aromatics by Novosphingobium aromaticivorans." mBio 15,8, e01718–24+ (2024). [DOI: 10.1128/mbio.01718-24] |
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| 2024 | Misra, J., Mettert, E.L. & Kiley, P.J. "Functional analysis of the methylerythritol phosphate pathway terminal enzymes IspG and IspH from Zymomonas mobilis." Microbiology Spectrum 12,7, e04256–23+ (2024). [DOI: 10.1128/spectrum.04256-23] |
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| 2024 | Mosier, S., Kelly, L., Ozlu, E. & Robertson, P. "Switchgrass (Panicum virgatum L.) cultivars have similar impacts on soil carbon and nitrogen stocks and microbial function." Global Change Biology – Bioenergy 16,3, e13125+ (2024). [DOI: 10.1111/gcbb.13125] |
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| 2024 | Myers, K.S., Place, M., Gasch, A.P., Noguera, D.R. & Donohue, T.J. "Auto-MuRCiS: a streamlined software package for analysis of multiplex, randomized CRISPR interference sequencing data." Microbiology Resource Announcements 13,9, e00356–24+ (2024). [DOI: 10.1128/mra.00356-24] |
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| 2024 | Nishikawa, K.K., Chen, J., Acheson, J.F., Harbaugh, S.V., Huss, P., Frenkel, M., Novy, N., Sieren, H.R., Lodewyk, E.C., Lee, D.H., et al. "Highly multiplexed design of an allosteric transcription factor to sense new ligands." Nature Communications 15,1, 10001+ (2024). [DOI: 10.1038/s41467-024-54260-8] |
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| 2024 | O’Neill, E.G., Geissler, C.H. & Maravelias, C.T. "Large-scale spatially explicit analysis of carbon capture at cellulosic biorefineries." Nature Energy 9, 828–838+ (2024). [DOI: 10.1038/s41560-024-01532-8] |
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| 2024 | Omolabake, S., Holland, C., Dülger, D.N., Yuan, Z., Hegg, E.L., Hodge, D.B. & Stahl, S.S. "Recovery of p-hydroxybenzoic acid from Cu-catalyzed alkaline hydrogen peroxide pretreatment of hybrid poplar." ACS Sustainable Chemistry & Engineering 12,15, 5726–5730+ (2024). [DOI: 10.1021/acssuschemeng.3c08032] |
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| 2024 | Opulente, D.A., Labella, A.L., Harrison, M.-C., Wolters, J.F., Liu, C., Li, Y., Kominek, J., Steenwyk, J.L., Stoneman, H.R., VanDenAvond, J., et al. "Genomic factors shape carbon and nitrogen metabolic niche breadth across Saccharomycotina yeasts." Science 384,6694, eadj4503+ (2024). [DOI: 10.1126/science.adj4503] |
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| 2024 | Parrell, D., Olson, J., Lemke, R.A., Donohue, T.J. & Wright, E.R. "Quantitative analysis of Rhodobacter sphaeroides storage organelles via cryo-electron tomography and light microscopy." Biomolecules 14,8, 1006+ (2024). [DOI: 10.3390/ biom14081006] |
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| 2024 | Pastor-Cantizano, N., Angelos, E.R., Ruberti, C., Jiang, T., Weng, X., Reagan, B.C., Haque, T., Juenger, T.E. & Brandizzi, F. "Programmed cell death regulator BAP2 is required for IRE1-mediated unfolded protein response in Arabidopsis." Nature Communications 15,1, 5804+ (2024). [DOI: 10.1038/s41467-024-50105-6] |
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| 2024 | de Lima, A.E.P., Coplien, J., Anthony, L.C., Sato, T.K., Zhang, Y., Karlen, S.D., Hittinger, C.T. & Maravelias, C.T. "On the synthesis of biorefineries for high-yield isobutanol production: from biomass-to-alcohol experiments to system level analysis." RSC Sustainability 2,9, 2532–2540+ (2024). [DOI: 10.1039/d4su00283k] |
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| 2024 | Pontes, A., Paraiso, F., Liu, Y.-C., Limtong, S., Jindamorakot, S., Jespersen, L., Goncalves, C., Rosa, C.A., Tsai, I.J., Rokas, A., et al. "Tracking alternative versions of the galactose gene network in the genus Saccharomyces and their expansion after domestication." iScience 27,2, 108987+ (2024). [DOI: 10.1016/j.isci.2024.108987] |
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| 2024 | Postma, K., Mane, S., Shen, M., Kussainova, M., Beisenova, R., Nanda, A., Dong, G. & Chen, J. "Water loss through evapotranspiration after precipitation events in bioenergy crops grown in similar climatic conditions." Frontiers in Environmental Science 12, 1463852+ (2024). [DOI: 10.3389/fenvs.2024.1463852] |
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| 2024 | Qin, S., Omolabake, S., Diaby, A., Li, J., González, L.D., Holland, C.M., Zavala, V.M., Stahl, S.S. & Van Lehn, R.C. "Identifying green solvent mixtures for bioproduct separation using Bayesian experimental design." ACS Sustainable Chemistry & Engineering 12,52, 18634–18647+ (2024). [DOI: 10.1021/acssuschemeng.4c07423] |
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| 2024 | Rapp, J.T., Bremer, B.J. & Romero, P.A. "Self-driving laboratories to autonomously navigate the protein fitness landscape." Nature Chemical Engineering 1, 97–107+ (2024). [DOI: 10.1038/s44286-023-00002-4] |
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| 2024 | Renna, L., Stefano, G., Puggioni, M.P., Kim, S.-J., Lavell, A., Froehlich, J.E., Burkart, G., Mancuso, S., Benning, C. & Brandizzi, F. "ER-associated VAP27-1 and VAP27-3 proteins functionally link the lipid-binding ORP2A at the ER-chloroplast contact sites." Nature Communications 15,1, 6008+ (2024). [DOI: 10.1038/s41467-024-50425-7] |
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| 2024 | Vazquez, J.R., Trujillo, E., Williams, J., She, F., Getahun, F., Callaghan, M.M., Coon, J.J. & Amador-Noguez, D. "Lipid membrane remodeling and metabolic response during isobutanol and ethanol exposure in Zymomonas mobilis." Biotechnology for Biofuels and Bioproducts 17,1, 14+ (2024). [DOI: 10.1186/s13068-023-02450-9] |
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| 2024 | Rivett, E.D., Ma, W., Ostrom, N.E. & Hegg, E.L. "Position-specific kinetic isotope effects for nitrous oxide: a new expansion of the Rayleigh model." Biogeosciences 21,20, 4549–4567+ (2024). [DOI: 10.5194/bg-21-4549-2024] |
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| 2024 | Rojas, J., Hose, J., Dutcher, A., Place, M., Wolters, J.F., Hittinger, C.T. & Gasch, A.P. "Comparative modeling reveals the molecular determinants of aneuploidy fitness cost in a wild yeast model." Cell Genomics 4,10, 100656+ (2024). [DOI: 10.1016/j.xgen.2024.100656] |
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| 2024 | Saba, J., Flores, K., Marshall, B., Engstrom, M.D., Peng, Y., Garje, A.S., Comstock, L.E. & Landick, R. "Bacteroides expand the functional versatility of a conserved transcription factor and transcribed DNA to program capsule diversity." Nature Communications 15,1, 10862+ (2024). [DOI: 10.1038/s41467-024-55215-9] |
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| 2024 | Schlecht, N.J., Lanier, E.R., Andersen, T.B., Brose, J., Holmes, D. & Hamberger, B.R. "CYP76BK1 orthologs catalyze furan and lactone ring formation in clerodane diterpenoids across the mint family." The Plant Journal 120,3, 984–997+ (2024). [DOI: 10.1111/tpj.17031] |
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| 2024 | Senanayake, M., Lin, C.-Y., Mansfield, S.D., Eudes, A., Davison, B.H., Pingali, S.V. & O’Neill, H. "Ectopic production of 3,4-dihydroxybenzoate in planta affects cellulose structure and organization." Biomacromolecules 25,6, 3542–3553+ (2024). [DOI: 10.1021/acs.biomac.4c00187] |
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| 2024 | Shiu, S.-H. & Lehti-Shiu, M.D. "Assessing the evolution of research topics in a biological field using plant science as an example." PLOS Biology 22,5, e3002612+ (2024). [DOI: 10.1371/journal.pbio.3002612] |
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| 2024 | Smith, R.A. & Ralph, J. "Cycling ferulate in monocot cell walls." Nature Plants 10, 1284–1286+ (2024). [DOI: 10.1038/s41477-024-01787-9] |
