Publications

When it comes to interdisciplinary collaboration, the titles of GLBRC publications speak for themselves. Each new year of operation has seen more publications from multiple labs that span our research themes, accelerating the Center's production of the basic research that generates technology to convert cellulosic biomass to advanced biofuels and bioproducts.

Year	Publication	Keywords
2012	Broadbent, J.R., Neeno-Eckwall, E.C., Stahl, B., Tandee, K., Cai, H., Morovic, W., Horvath, P., Heidenreich, J., Perna, N.T., Barrangou, R., et al. "Analysis of the Lactobacillus casei supragenome and its influence in species evolution and lifestyle adaptation." BMC Genomics 13,1, 533+ (2012). [DOI: 10.1186/1471-2164-13-533] DOI Google Scholar	Conversion
2012	Casler, M.D. "Switchgrass breeding, genetics, and genomics." in Switchgrass. 29-52+ (Springer-Verlag, 2012). [DOI: 10.1007/978-1-4471-2903-5] DOI Google Scholar	Feedstocks
2012	Chapman, K.D. & Ohlrogge, J.B. "Compartmentation of triacylglycerol accumulation in plants." Journal of Biological Chemistry 287,4, 2288-2294+ (2012). [DOI: 10.1074/jbc.R111.290072] DOI Google Scholar	Feedstocks
2012	Chen, F., Tobimatsu, Y., Havkin-Frenkel, D., Dixon, R.A. & Ralph, J. "A polymer of caffeyl alcohol in plant seeds." Proceedings of the National Academy of Sciences of the United States of America 109,5, 1772-1777+ (2012). [DOI: 10.1073/pnas.1120992109] DOI Google Scholar	Feedstocks
2012	Chen, X. & Shachar-Hill, Y. "Insights into metabolic efficiency from flux analysis." Journal of Experimental Botany 63,6, 2343-51+ (2012). [DOI: 10.1093/jxb/ers057] DOI Google Scholar	Feedstocks
2012	Chia, J.-M., Song, C., Bradbury, P.J., Costich, D., de Leon, N., Doebley, J., Elshire, R.J., Gaut, B., Geller, L., Glaubitz, J.C., et al. "Maize HapMap2 identifies extant variation from a genome in flux." Nature Genetics 44,7, 803-807+ (2012). [DOI: 10.1038/ng.2313] DOI Google Scholar	Feedstocks
2012	Chundawat, S.P.S., Chang, L., Gunawan, C., Balan, V., McMahan, C. & Dale, B.E. "Guayule as a feedstock for lignocellulosic biorefineries using ammonia fiber expansion (AFEX) pretreatment." Industrial Crops and Products 37,1, 486–492+ (2012). [DOI: 10.1016/j.indcrop.2011.07.025] DOI Google Scholar	Deconstruction
2012	Currie, C.R. "The tangled banks of ants and microbes." in Microbes and Evolution: The World That Darwin Never Saw. 181-190+ (ASM Press, 2012). Google Scholar	Deconstruction
2012	Dale, B.E. & Ong, R.G. "Energy, wealth, and human development: why and how biomass pretreatment research must improve." Biotechnology Progress 28,4, 893-8+ (2012). [DOI: 10.1002/btpr.1575] DOI Google Scholar	Deconstruction
2012	del Río, J.C., Prinsen, P., Rencoret, J., Nieto, L., Jiménez-Barbero, J., Ralph, J., Martínez, Á.T. & Gutiérrez, A. "Structural characterization of the lignin in the cortex and pith of elephant grass (Pennisetum purpureum) stems." Journal of Agricultural and Food Chemistry 60,14, 3619-3634+ (2012). [DOI: 10.1021/jf300099g] DOI Google Scholar	Feedstocks
2012	del Río, J.C., Rencoret, J., Prinsen, P., Martínez, Á.T., Ralph, J. & Gutiérrez, A. "Structural characterization of wheat straw lignin as revealed by analytical pyrolysis, 2D-NMR, and reductive cleavage methods." Journal of Agricultural and Food Chemistry 60, 5922-5935+ (2012). [DOI: 10.1021/jf301002n] DOI Google Scholar	Feedstocks
2012	Dufour, Y.S. & Donohue, T.J. "Signal correlations in ecological niches can shape the organization and evolution of bacterial gene regulatory networks." in Advances in Microbial Physiology. vol. 61 1-36+ (2012). [DOI: 10.1016/B978-0-12-394423-8.00001-9] DOI Google Scholar	Conversion
2012	Egbendewe-Mondzozo, A., Swinton, S.M., Izaurralde, C., Manowitz, D.H. & Zhang, X. "Maintaining environmental quality while expanding energy biomass production: policy simulations from Michigan, USA." in International Association of Agricultural Economists (IAAE) Triennial Conference. (2012). Google Scholar	Sustainability
2012	Ellinger, J.J., Miller, D.C., Lewis, I.A. & Markley, J.L. "Semiautomated device for batch extraction of metabolites from tissue samples." Analytical Chemistry 84,4, 1809-12+ (2012). [DOI: 10.1021/ac203390v] DOI Google Scholar
2012	Elumalai, S., Tobimatsu, Y., Grabber, J.H., Pan, X. & Ralph, J. "Epigallocatechin gallate incorporation into lignin enhances the alkaline delignification and enzymatic saccharification of cell walls." Biotechnology for Biofuels 5, 59+ (2012). [DOI: 10.1186/1754-6834-5-59] DOI Google Scholar	Feedstocks
2012	Eudes, A., George, A., Mukerjee, P., Kim, J.S., Pollet, B., Benke, P.I., Yang, F., Mitra, P., Sun, L., Cetinkol, O.P., et al. "Biosynthesis and incorporation of side-chain-truncated lignin monomers to reduce lignin polymerization and enhance saccharification." Plant Biotechnology Journal 10,5, 609-620+ (2012). [DOI: 10.1111/j.1467-7652.2012.00692.x] DOI Google Scholar	Feedstocks
2012	Gardner, J.G. & Keating, D.H. "Genetic and functional genomic approaches for the study of plant cell wall degredation in Celvibrio japonicus." in Methods in Enzymology. vol. 510 331-347+ (2012). [DOI: 10.1016/B978-0-12-415931-0.00018-5] DOI Google Scholar	Conversion
2012	Garlock, R.J., Balan, V. & Dale, B.E. "Optimization of AFEX™ pretreatment conditions and enzyme mixtures to maximize sugar release from upland and lowland switchgrass." Bioresoure Technology 104, 757-68+ (2012). [DOI: 10.1016/j.biortech.2011.11.034] DOI Google Scholar	Deconstruction
2012	Garlock, R.J., Bals, B., Jasrotia, P., Balan, V. & Dale, B.E. "Influence of variable species composition on the saccharification of AFEX™ pretreated biomass from unmanaged fields in comparison to corn stover." Biomass and Bioenergy 37, 49-59+ (2012). [DOI: 10.1016/j.biombioe.2011.12.036] DOI Google Scholar	Deconstruction
2012	Garlock, R.J., Wong, Y.S., Balan, V. & Dale, B.E. "AFEX pretreatment and enzymatic conversion of black locust (Robinia pseudoacacia L.) to soluble sugars." BioEnergy Research 5,2, 306-318+ (2012). [DOI: 10.1007/s12155-011-9134-6] DOI Google Scholar	Deconstruction
2012	Gärtner, K., Lechno-Yossef, S., Cornish, A.J., Wolk, P. & Hegg, E.L. "Expression of Shewanella oneidensis MR-1 [FeFe]-hydrogenase genes in Anabaena sp. strain PCC 7120." Applied and Environmental Microbiology 78,24, 8579-8586+ (2012). [DOI: 10.1128/AEM.01959-12] DOI Google Scholar	Deconstruction, Conversion
2012	Grieshop, M.J., Werling, B.P., Buehrer, K., Perrone, J., Isaacs, R. & Landis, D.A. "Big brother is watching: studying insect predation in the age of digital surveillance." American Entomologist 58,3, 172-182+ (2012). [DOI: 10.1093/ae/58.3.172] DOI Google Scholar	Sustainability
2012	Gunckel, K., Mohan, L., Covitt, B.A. & Anderson, C.W. "Addressing challenges in developing learning progressions for environmental science literacy." in Learning progressions in science: Current challenges and future directions. 39-75+ (Sense Publishers, 2012). [DOI: 10.1007/978-94-6091-824-7_4] DOI Google Scholar
2012	Gurbuz, E.I., Wettstein, S.G. & Dumesic, J.A. "Conversion of hemicellulose to furfural and levulinic acid using biphasic reactors with alkylphenol solvents." ChemSusChem 5,2, 383-387+ (2012). [DOI: 10.1002/cssc.201100608] DOI Google Scholar	Conversion
2012	Haft, R., Gardner, J. & Keating, D. "Quantitative colorimetric measurement of cellulose degradation under microbial culture conditions." Applied Microbiology and Biotechnology 94,1, 223-9+ (2012). [DOI: 10.1007/s00253-012-3968-5] DOI Google Scholar	Conversion