Publications

When it comes to interdisciplinary collaboration, the titles of GLBRC publications speak for themselves. Each new year of operation has seen more publications from multiple labs that span our research themes, accelerating the Center's production of the basic research that generates technology to convert cellulosic biomass to advanced biofuels and bioproducts.

Year	Publication	Keywords
2013	Imam, S., Noguera, D.R. & Donohue, T.J. "Global insights into energetic and metabolic networks in Rhodobacter sphaeroides." BMC Systems Biology 7,1, 89+ (2013). [DOI: 10.1186/1752-0509-7-89] DOI Google Scholar	Conversion
2013	Jabbour, D., Borrusch, M.S., Banerjee, G. & Walton, J.D. "Enhancement of fermentable sugar yields by α-xylosidase supplementation of commercial cellulases." Biotechnology for Biofuels 6, 58+ (2013). [DOI: 10.1186/1754-6834-6-58] DOI Google Scholar	Deconstruction
2013	Jensen, J.K., Johnson, N. & Wilkerson, C.G. "Discovery of diversity in xylan biosynthetic genes by transcriptional profiling of a heteroxylan containing mucilaginous tissue." Frontiers in Plant Science 4, 183+ (2013). [DOI: 10.3389/fpls.2013.00183] DOI Google Scholar	Feedstocks
2013	Jin, M., Bothfeld, W., Austin, S., Sato, T.K., LaReau, A., Li, H., Foston, M., Gunawan, C., LeDuc, R.D., Quensen, J.F., et al. "Effect of storage conditions on the stability and fermentability of enzymatic lignocellulosic hydrolysate." Bioresource Technology 147, 212-220+ (2013). [DOI: 10.1016/j.biortech.2013.08.018] DOI Google Scholar	Deconstruction, Conversion
2013	Jin, M., Sarks, C., Gunawan, C., Bice, B.D., Simonett, S.P., Narasimhan, R.A., Willis, L.B., Dale, B.E., Balan, V. & Sato, T.K. "Phenotypic selection of a wild Saccharomyces cerevisiae strain for simultaneous saccharification and co-fermentation of AFEX™ pretreated corn stover." Biotechnology for Biofuels 6, 108+ (2013). [DOI: 10.1186/1754-6834-6-108] DOI Google Scholar	Deconstruction, Conversion
2013	Jordan, N., Schulte, L.A., Williams, C., Pitt, D., Slotterback, C.S., Jackson, R., Landis, D., Dale, B., Becker, D. & Rickenbach, M. "Landlabs: an integrated approach to creating agricultural enterprises that meet the triple botom line." Journal of Higher Education Outreach and Engagement 17,4, 175-200+ (2013). Google Scholar	Sustainability
2013	Kang, S., Post, W.M., Nichols, J.A., Wang, D., West, T.O., Bandaru, V. & Izaurralde, R.C. "Marginal lands: concept, assessment and management." Journal of Agricultural Science 5,5, 129-139+ (2013). [DOI: 10.5539/jas.v5n5p129] DOI Google Scholar	Sustainability
2013	Keegstra, K. "Interview with Professor Kenneth Keegstra." Biofuels 4,2, 147-150+ (2013). [DOI: 10.4155/bfs.12.87] DOI Google Scholar
2013	Kim, J., Sen, M. & Maravelias, C.T. "An optimization-based assessment framework for biomass-to-fuel conversion strategies." Energy & Environmental Science 6,4, 1093-1104+ (2013). [DOI: 10.1039/C3EE24243A] DOI Google Scholar	Deconstruction
2013	Kim, W.-C., Kim, J.-Y., Ko, J.-H., Kim, J. & Han, K.-H. "Transcription factor MYB46 is an obligate component of the transcriptional regulatory complex for functional expression of secondary wall-associated cellulose synthases in Arabidopsis thaliana." Journal of Plant Physiology 170,15, 1374-1378+ (2013). [DOI: 10.1016/j.jplph.2013.04.012] DOI Google Scholar	Feedstocks
2013	King, J.S., Ceulemans, R., Albaugh, J.M., Dillen, S.Y., Domec, J.-C., Fichot, R., Fischer, M., Leggett, Z., Sucre, E., Trnka, M., et al. "The challenge of lignocellulosic bioenergy in a water-limited world." BioScience 63,2, 102-117+ (2013). [DOI: 10.1525/bio.2013.63.2] DOI Google Scholar	Sustainability
2013	Klassen, J.L. & Currie, C.R. "ORFcor: identifying and accommodating ORF prediction inconsistencies for phylogenetic analysis." PLOS ONE 8,3, (2013). [DOI: 10.1371/journal.pone.0058387] DOI Google Scholar	Deconstruction
2013	Kraatz, S., Sinistore, J.C. & Reinemann, D.J. "Energy intensity and global warming potential of corn grain ethanol production in Wisconsin (USA)." Food and Energy Security 2,3, 207-219+ (2013). [DOI: 10.1002/fes3.27] DOI Google Scholar	Sustainability
2013	Kucharik, C.J., VanLoocke, A., Lenters, J.D. & Motew, M.M. "Miscanthus establishment and overwintering in the Midwest USA: a regional modeling study of crop residue management on critical minimum soil temperatures." PLOS ONE 8,7, (2013). [DOI: 10.1371/journal.pone.0068847] DOI Google Scholar	Sustainability
2013	Lennen, R.M. & Pfleger, B.F. "Modulating membrane composition alters free fatty acid tolerance in Escherichia coli." PLOS ONE 8,1, (2013). [DOI: 10.1371/journal.pone.0054031.g001] DOI Google Scholar	Conversion
2013	Lennen, R.M. & Pfleger, B.F. "Microbial production of fatty acid-derived fuels and chemicals." Current Opinion in Biotechnology 24,6, 1044-1053+ (2013). [DOI: 10.1016/j.copbio.2013.02.028] DOI Google Scholar	Conversion
2013	Li, Z., Chen, C.H., Hegg, E.L. & Hodge, D.B. "Rapid and effective oxidative pretreatment of woody biomass at mild reaction conditions and low oxidant loadings." Biotechnology for Biofuels 6, 119+ (2013). [DOI: 10.1186/1754-6834-6-119] DOI Google Scholar	Deconstruction
2013	Li, Z., Chen, C.H., Liu, T., Mathrubootham, V., Hegg, E.L. & Hodge, D.B. "Catalysis with CuII(bpy) improves alkaline hydrogen peroxide pretreatment." Biotechnology and Bioengineering 110,4, 1078-1086+ (2013). [DOI: 10.1002/bit.24793] DOI Google Scholar	Deconstruction
2013	Lu, S., Li, Q., Wei, H., Chang, M.-J., Tunlaya-Anukit, S., Kim, H., Liu, J., Song, J., Sun, Y.-H., Yuan, L., et al. "Ptr-miR39a is a negative regulator of laccase genes affecting lignin content in Populus trichocarpa." Proceedings of the National Academy of Sciences of the United States of America 110,26, 10848-10853+ (2013). [DOI: 10.1073/pnas.1308936110] DOI Google Scholar	Feedstocks
2013	Ma, W., Kong, Q., Arondel, V., Kilaru, A., Bates, P.D., Thrower, N.A., Benning, C. & Ohlrogge, J. "WRINKLED1, a ubiquitous regulator in oil accumulating tissues from Arabidopsis embryos to oil palm mesocarp." PLOS ONE 8,7, (2013). [DOI: 10.1371/journal.pone.0068887] DOI Google Scholar	Feedstocks
2013	Mead, D., Drinkwater, C. & Brumm, P.J. "Genomic and enzymatic results show Bacillus cellulosilyticus uses a novel set of LPXTA carbohydrases to hydrolyze polysaccharides." PLOS ONE 8,4, (2013). [DOI: 10.1371/journal.pone.0061131] DOI Google Scholar	Deconstruction
2013	Meehan, T.D., Gratton, C., Diehl, E., Hunt, N.D., Mooney, D.F., Ventura, S.J., Barham, B.L. & Jackson, R.D. "Ecosystem-service tradeoffs associated with switching from annual to perennial energy crops in riparian zones of the US Midwest." PLOS ONE 8,11, (2013). [DOI: 10.1371/journal.pone.0080093] DOI Google Scholar	Sustainability
2013	Minty, J.J., Singer, M.E., Scholz, S.A., Bae, C.-H., Ahn, J.-H., Foster, C.E., Liao, J.C. & Lin, X.N. "Design and characterization of synthetic fungal-bacterial consortia for direct production of isobutanol from cellulosic biomass." Proceedings of the National Academy of Sciences of the United States of America 110,36, 14592-14597+ (2013). [DOI: 10.1073/pnas.1218447110] DOI Google Scholar
2013	Muttoni, G., Palacios-Rojas, N., Galicia, L., Rosales, A. & de Leon, N. "Cell wall composition and biomass digestibility diversity in Mexican maize (Zea mays L.) landraces and CIMMYT elite inbred lines." Maydica 58, 21-33+ (2013). Google Scholar	Feedstocks
2013	Myers, K.S., Yan, H., Ong, I.M., Chung, D., Liang, K., Tran, F., Keleş, S., Landick, R. & Kiley, P.J. "Genome-scale analysis of Escherichia coli FNR reveals complex features of transcription factor binding." PLOS Genetics 9,6, (2013). [DOI: 10.1371/journal.pgen.1003565] DOI Google Scholar	Conversion