Publications

Vinay-Lara, E., Hamilton, J.J., Stahl, B., Broadbent, J.R., Reed, J.L. & Steele, J.L. "Genome-scale reconstruction of metabolic networks of Lactobacillus casei ATCC 334 and 12A." PLOS ONE 9,11, (2014). [DOI: 10.1371/journal.pone.0110785]

Werling, B.P., Dickson, T.L., Isaacs, R., Gaines, H., Gratton, C., Gross, K.L., Liere, H., Malmstrom, C.M., Meehan, T.D., Ruan, L., et al. "Perennial grasslands enhance biodiversity and multiple ecosystem services in bioenergy landscapes." Proceedings of the National Academy of Sciences of the United States of America 111,4, 1652–1657+ (2014). [DOI: 10.1073/pnas.1309492111]

Wieder, W.R., Grandy, A.S., Kallenbach, C.M. & Bonan, G.B. "Integrating microbial physiology and physio-chemical principles in soils with the MIcrobial-MIneral Carbon Stabilization (MIMICS) model." Biogeosciences 11, 3899–3917+ (2014). [DOI: 10.5194/bgd-11-1147-2014 final: doi:10.5194/bg-11-3899-2014]

Wilkerson, C.G., Mansfield, S.D., Lu, F., Withers, S., Park, J.-Y., Karlen, S.D., Gonzales-Vigil, E., Padmakshan, D., Unda, F., Rencoret, J., et al. "Monolignol ferulate transferase introduces chemically labile linkages into the lignin backbone." Science 344,6179, 90–93+ (2014). [DOI: 10.1126/science.1250161]

Williams, D.L. & Hodge, D.B. "Impacts of delignification and hot water pretreatment on the water induced cell wall swelling behavior of grasses and its relation to cellulolytic enzyme hydrolysis and binding." Cellulose 21,1, 221–235+ (2014). [DOI: 10.1007/s10570-013-0149-3]

Wohlbach, D.J., Rovinskiy, N., Lewis, J.A., Sardi, M., Schackwitz, W.S., Martin, J.A., Deshpande, S., Daum, C.G., Lipzen, A., Sato, T.K., et al. "Comparative genomics of Saccharomyces cerevisiae natural isolates for bioenergy production." Genome Biology and Evolution 6,9, 2557–2566+ (2014). [DOI: 10.1093/gbe/evu199]

Woods, D.P., Ream, T.S. & Amasino, R.M. "Memory of the vernalized state in plants including the model grass Brachypodium distachyon." Frontiers in Plant Science 5, 99+ (2014). [DOI: 10.3389/fpls.2014.00099]

Woods, D.P., Ream, T.S., Minevich, G., Hobert, O. & Amasino, R.M. "PHYTOCHROME C is an essential light receptor for photoperiodic flowering in the temperate grass, Brachypodium distachyon." Genetics 198,1, 397–408+ (2014). [DOI: 10.1534/genetics.114.166785]

Wyche, T.P., Piotrowski, J.S., Hou, Y., Braun, D., Deshpande, R., McIlwain, S., Ong, I.M., Myers, C.L., Guzei, I.A., Westler, W.M., et al. "Forazoline A: marine-derived polyketide with antifungal in vivo efficacy." Angewandte Chemie (International Edition) 126,43, 11767–11770+ (2014). [DOI: 10.1002/anie.201405990]

Xiang, Z., Anthony, R., Tobimatsu, Y. & Runge, T. "Emulsifying properties of an arabinoxylan–protein gum from distillers’ grains and the co-production of animal feed." Cellulose 21,5, 3623–3635+ (2014). [DOI: 10.1007/s10570-014-0379-z]

Xiang, Z., Watson, J., Tobimatsu, Y. & Runge, T. "Film-forming polymers from distillers’ grains: structural and material properties." Industrial Crops and Products 59, 282–289+ (2014). [DOI: 10.1016/j.indcrop.2014.05.023]

Yang, L.H. & Gratton, C. "Insects as drivers of ecosystem processes." Current Opinion in Insect Science 2, 26–32+ (2014). [DOI: 10.1016/j.cois.2014.06.004]

Ye, Z., Zheng, Y., Li, B., Borrusch, M.S., Storms, R. & Walton, J.D. "Enhancement of synthetic Trichoderma-based enzyme mixtures for biomass conversion with an alternative family 5 Glycosyl Hydrolase from Sporotrichum thermophile." PLOS ONE 9,10, (2014). [DOI: 10.1371/journal.pone.0109885]

Yelle, D.J., Kapich, A.N., Houtman, C.J., Lu, F., Timokhin, V.I., Fort, R.C., Jr, Ralph, J. & Hammel, K.E. "A highly diastereoselective oxidant contributes to ligninolysis by the white rot basidiomycete Ceriporiopsis subvermispora." Applied and Environmental Microbiology 80,24, 7536–7544+ (2014). [DOI: 10.1128/AEM.02111-14]

Zhang, X., Sahajpal, R., Manowitz, D.H., Zhao, K., LeDuc, S.D., Xu, M., Xiong, W., Zhang, A., Izaurralde, R.C., Thomson, A.M., et al. "Multi-scale geospatial agroecosystem modeling: a case study on the influence of soil data resolution on carbon budget estimates." Science of the Total Environment 479-480, 138–150+ (2014). [DOI: 10.1016/j.scitotenv.2014.01.099]

Alonso, D.M., Gallo, J., Mellmer, M., Wettstein, S.G. & Dumesic, J.A. "Direct conversion of cellulose to levulinic acid and gamma-valerolactone using solid acid catalysts." Catalysis Science and Technology 3, 927–931+ (2013). [DOI: 10.1039/c2cy20689g]

Alonso, D.M., Wettstein, S.G., Mellmer, M.A., Gurbuz, E.I. & Dumesic, J.A. "Integrated conversion of hemicellulose and cellulose from lignocellulosic biomass." Energy and Environmental Science 6, 76–80+ (2013). [DOI: 10.1039/C2EE23617F]

Caes, B.R., Palte, M.J. & Raines, R.T. "Organocatalytic conversion of cellulose into a platform chemical." Chemical Science 4,1, 196–199+ (2013). [DOI: 10.1039/c2sc21403b]

Chen, F., Tobimatsu, Y., Jackson, L., Ralph, J. & Dixon, R.A. "Novel seed coat lignins in the Cactaceae: structure, distribution and implications for the evolution of lignin diversity." The Plant Journal 73, 201–211+ (2013). [DOI: 10.1111/tpj.12012]

Jin, M., Gunawan, C., Balan, V., Yu, X. & Dale, B.E. "Continuous SSCF of AFEX™ pretreated corn stover for enhanced ethanol productivity using commercial enzymes and Saccharomyces cerevisiae 424A (LNH-ST)." Biotechnology and Bioengineering 110,5, 1302–1311+ (2013). [DOI: 10.1002/bit.24797]

Kang, S., Post, W., Wang, D., Nichols, J. & Bandaru, V. "Hierarchical marginal land assessment for land use planning." Land Use Policy 30,1, 106–113+ (2013). [DOI: 10.1016/j.landusepol.2012.03.002]

Kim, W.-C., Ko, J.-H., Kim, J.-Y., Kim, J.-M., Bae, H.-J. & Han, K.-H. "MYB46 directly regulates the gene expression of secondary wall-associated cellulose synthases in Arabidopsis." The Plant Journal 73,1, 26–36+ (2013). [DOI: 10.1111/j.1365-313X.2012.05124.x]

Lennen, R.M., Politz, M.G., Kruziki, M.A. & Pfleger, B.F. "Identification of transport proteins involved in free fatty acid efflux in Escherichia coli." Journal of Bacteriology 195,1, 135–44+ (2013). [DOI: 10.1128/JB.01477-12]

Meehan, T.D., Glassberg, J. & Gratton, C. "Butterfly community structure and landscape composition in agricultural landscapes of the central United States." Journal of Insect Conservation 17,2, 411–419+ (2013). [DOI: 10.1007/s10841-012-9523-y]

Paper, J.M., Scott-Craig, J.S., Cavalier, D.M., Faik, A., Wiemels, R.E., Borrusch, M.S., Bongers, M. & Walton, J.D. "α-Fucosidases with different substrate specificities from two species of Fusarium." Applied Microbiology and Biotechnology 97,12, 5371–5380+ (2013). [DOI: 10.1007/s00253-012-4423-3]