Publications

Imam, S., Noguera, D.R. & Donohue, T.J. "Global insights into energetic and metabolic networks in Rhodobacter sphaeroides." BMC Systems Biology 7,1, 89+ (2013). [DOI: 10.1186/1752-0509-7-89]

Jabbour, D., Borrusch, M.S., Banerjee, G. & Walton, J.D. "Enhancement of fermentable sugar yields by α-xylosidase supplementation of commercial cellulases." Biotechnology for Biofuels 6, 58+ (2013). [DOI: 10.1186/1754-6834-6-58]

Jensen, J.K., Johnson, N. & Wilkerson, C.G. "Discovery of diversity in xylan biosynthetic genes by transcriptional profiling of a heteroxylan containing mucilaginous tissue." Frontiers in Plant Science 4, 183+ (2013). [DOI: 10.3389/fpls.2013.00183]

Jin, M., Bothfeld, W., Austin, S., Sato, T.K., LaReau, A., Li, H., Foston, M., Gunawan, C., LeDuc, R.D., Quensen, J.F., et al. "Effect of storage conditions on the stability and fermentability of enzymatic lignocellulosic hydrolysate." Bioresource Technology 147, 212–220+ (2013). [DOI: 10.1016/j.biortech.2013.08.018]

Jin, M., Sarks, C., Gunawan, C., Bice, B.D., Simonett, S.P., Narasimhan, R.A., Willis, L.B., Dale, B.E., Balan, V. & Sato, T.K. "Phenotypic selection of a wild Saccharomyces cerevisiae strain for simultaneous saccharification and co-fermentation of AFEX™ pretreated corn stover." Biotechnology for Biofuels 6, 108+ (2013). [DOI: 10.1186/1754-6834-6-108]

Jordan, N., Schulte, L.A., Williams, C., Pitt, D., Slotterback, C.S., Jackson, R., Landis, D., Dale, B., Becker, D. & Rickenbach, M. "Landlabs: an integrated approach to creating agricultural enterprises that meet the triple botom line." Journal of Higher Education Outreach and Engagement 17,4, 175–200+ (2013).

Kang, S., Post, W.M., Nichols, J.A., Wang, D., West, T.O., Bandaru, V. & Izaurralde, R.C. "Marginal lands: concept, assessment and management." Journal of Agricultural Science 5,5, 129–139+ (2013). [DOI: 10.5539/jas.v5n5p129]

Keegstra, K. "Interview with Professor Kenneth Keegstra." Biofuels 4,2, 147–150+ (2013). [DOI: 10.4155/bfs.12.87]

Kim, J., Sen, M. & Maravelias, C.T. "An optimization-based assessment framework for biomass-to-fuel conversion strategies." Energy & Environmental Science 6,4, 1093–1104+ (2013). [DOI: 10.1039/C3EE24243A]

Kim, W.-C., Kim, J.-Y., Ko, J.-H., Kim, J. & Han, K.-H. "Transcription factor MYB46 is an obligate component of the transcriptional regulatory complex for functional expression of secondary wall-associated cellulose synthases in Arabidopsis thaliana." Journal of Plant Physiology 170,15, 1374–1378+ (2013). [DOI: 10.1016/j.jplph.2013.04.012]

King, J.S., Ceulemans, R., Albaugh, J.M., Dillen, S.Y., Domec, J.-C., Fichot, R., Fischer, M., Leggett, Z., Sucre, E., Trnka, M., et al. "The challenge of lignocellulosic bioenergy in a water-limited world." BioScience 63,2, 102–117+ (2013). [DOI: 10.1525/bio.2013.63.2]

Klassen, J.L. & Currie, C.R. "ORFcor: identifying and accommodating ORF prediction inconsistencies for phylogenetic analysis." PLOS ONE 8,3, e58387+ (2013). [DOI: 10.1371/journal.pone.0058387]

Kraatz, S., Sinistore, J.C. & Reinemann, D.J. "Energy intensity and global warming potential of corn grain ethanol production in Wisconsin (USA)." Food and Energy Security 2,3, 207–219+ (2013). [DOI: 10.1002/fes3.27]

Kucharik, C.J., VanLoocke, A., Lenters, J.D. & Motew, M.M. "Miscanthus establishment and overwintering in the Midwest USA: a regional modeling study of crop residue management on critical minimum soil temperatures." PLOS ONE 8,7, e68847+ (2013). [DOI: 10.1371/journal.pone.0068847]

Lennen, R.M. & Pfleger, B.F. "Modulating membrane composition alters free fatty acid tolerance in Escherichia coli." PLOS ONE 8,1, e54031+ (2013). [DOI: 10.1371/journal.pone.0054031.g001]

Lennen, R.M. & Pfleger, B.F. "Microbial production of fatty acid-derived fuels and chemicals." Current Opinion in Biotechnology 24,6, 1044–1053+ (2013). [DOI: 10.1016/j.copbio.2013.02.028]

Li, Z., Chen, C.H., Hegg, E.L. & Hodge, D.B. "Rapid and effective oxidative pretreatment of woody biomass at mild reaction conditions and low oxidant loadings." Biotechnology for Biofuels 6, 119+ (2013). [DOI: 10.1186/1754-6834-6-119]

Li, Z., Chen, C.H., Liu, T., Mathrubootham, V., Hegg, E.L. & Hodge, D.B. "Catalysis with CuII(bpy) improves alkaline hydrogen peroxide pretreatment." Biotechnology and Bioengineering 110,4, 1078–1086+ (2013). [DOI: 10.1002/bit.24793]

Lu, S., Li, Q., Wei, H., Chang, M.-J., Tunlaya-Anukit, S., Kim, H., Liu, J., Song, J., Sun, Y.-H., Yuan, L., et al. "Ptr-miR39a is a negative regulator of laccase genes affecting lignin content in Populus trichocarpa." Proceedings of the National Academy of Sciences of the United States of America 110,26, 10848–10853+ (2013). [DOI: 10.1073/pnas.1308936110]

Ma, W., Kong, Q., Arondel, V., Kilaru, A., Bates, P.D., Thrower, N.A., Benning, C. & Ohlrogge, J. "WRINKLED1, a ubiquitous regulator in oil accumulating tissues from Arabidopsis embryos to oil palm mesocarp." PLOS ONE 8,7, e68887+ (2013). [DOI: 10.1371/journal.pone.0068887]

Mead, D., Drinkwater, C. & Brumm, P.J. "Genomic and enzymatic results show Bacillus cellulosilyticus uses a novel set of LPXTA carbohydrases to hydrolyze polysaccharides." PLOS ONE 8,4, e61131+ (2013). [DOI: 10.1371/journal.pone.0061131]

Meehan, T.D., Gratton, C., Diehl, E., Hunt, N.D., Mooney, D.F., Ventura, S.J., Barham, B.L. & Jackson, R.D. "Ecosystem-service tradeoffs associated with switching from annual to perennial energy crops in riparian zones of the US Midwest." PLOS ONE 8,11, e80093+ (2013). [DOI: 10.1371/journal.pone.0080093]

Minty, J.J., Singer, M.E., Scholz, S.A., Bae, C.-H., Ahn, J.-H., Foster, C.E., Liao, J.C. & Lin, X.N. "Design and characterization of synthetic fungal-bacterial consortia for direct production of isobutanol from cellulosic biomass." Proceedings of the National Academy of Sciences of the United States of America 110,36, 14592–14597+ (2013). [DOI: 10.1073/pnas.1218447110]

Muttoni, G., Palacios-Rojas, N., Galicia, L., Rosales, A. & de Leon, N. "Cell wall composition and biomass digestibility diversity in Mexican maize (Zea mays L.) landraces and CIMMYT elite inbred lines." Maydica 58, 21–33+ (2013).

Myers, K.S., Yan, H., Ong, I.M., Chung, D., Liang, K., Tran, F., Keles, S., Landick, R. & Kiley, P.J. "Genome-scale analysis of Escherichia coli FNR reveals complex features of transcription factor binding." PLOS Genetics 9,6, e1003565+ (2013). [DOI: 10.1371/journal.pgen.1003565]