Publications

Lin, Y., King, J.Y., Karlen, S.D. & Ralph, J. "Using 2D NMR spectroscopy to assess effects of UV radiation on cell wall chemistry during litter decomposition." Biogeochemistry 125,3, 427–436+ (2015). [DOI: 10.1007/s10533-015-0132-1]

Liu, J., Rice, A., McGlew, K., Shaw, V., Park, H., Clemente, T., Pollard, M., Ohlrogge, J. & Durrett, T.P. "Metabolic engineering of oilseed crops to produce high levels of novel acetyl glyceride oils with reduced viscosity, freezing point and calorific value." Plant Biotechnology Journal 13,6, 858–865+ (2015). [DOI: 10.1111/pbi.12325]

Liu, J., Tjellstrom, H., McGlew, K., Shaw, V., Rice, A., Simpson, J., Kosma, D., Ma, W., Yang, W., Strawsine, M., et al. "Field production, purification and analysis of high-oleic acetyl-triacylglycerols from transgenic Camelina sativa." Industrial Crops and Products 65, 259–268+ (2015). [DOI: 10.1016/j.indcrop.2014.11.019]

Liu, Y., Mellmer, M.A., Alonso, D.M. & Dumesic, J.A. "Effects of water on the copper-catalyzed conversion of hydroxymethylfurfural in tetrahydrofuran." ChemSusChem 8,23, 3983–3986+ (2015). [DOI: 10.1002/cssc.201501122]

Long, M.R., Ong, W.K. & Reed, J.L. "Computational methods in metabolic engineering for strain design." Current Opinion in Biotechnology 34, 135–141+ (2015). [DOI: 10.1016/j.copbio.2014.12.019]

Lu, F., Karlen, S.D., Regner, M., Kim, H., Ralph, S.A., Sun, R.-C., Kuroda, K.- ichi, Augustin, M.A., Mawson, R., Sabarez, H., et al. "Naturally p-hydroxybenzoylated lignins in palms." BioEnergy Research 8,3, 934–952+ (2015). [DOI: 10.1007/s12155-015-9583-4]

Luterbacher, J.S., Alonso, D.M., Rand, J.M., Questell-Santiago, Y.M., Yeap, J.H., Pfleger, B.F. & Dumesic, J.A. "Solvent-enabled nonenzymatic sugar production from biomass for chemical and biological upgrading." ChemSusChem 8,8, 1317–1322+ (2015). [DOI: 10.1002/cssc.201403418]

Luterbacher, J.S., Azarpira, A., Motagamwala, A.H., Lu, F., Ralph, J. & Dumesic, J.A. "Lignin monomer production integrated into the γ-valerolactone sugar platform." Energy & Environmental Science 8,9, 2657–2663+ (2015). [DOI: 10.1039/c5ee01322d]

Ma, W., Kong, Q., Grix, M., Mantyla, J.J., Yang, Y., Benning, C. & Ohlrogge, J.B. "Deletion of a C-terminal intrinsically disordered region of WRINKLED1 affects its stability and enhances oil accumulation in Arabidopsis." The Plant Journal 83,5, 864–874+ (2015). [DOI: 10.1111/tpj.12933]

McCormick, R.F., Truong, S.K. & Mullet, J.E. "RIG: recalibration and interrelation of genomic sequence data with the GATK." G3: Genes | Genomes | Genetics 5,4, 655–665+ (2015). [DOI: 10.1534/g3.115.017012]

McGlew, K., Shaw, V., Zhang, M., Kim, R.J., Yang, W., Shorrosh, B., Suh, M.C. & Ohlrogge, J. "An annotated database of Arabidopsis mutants of acyl lipid metabolism." Plant Cell Reports 34,4, 519–532+ (2015). [DOI: 10.1007/s00299-014-1710-8]

Meehan, T.D. & Gratton, C. "A consistent positive association between landscape simplification and insecticide use across the Midwestern US from 1997 through 2012." Environmental Research Letters 10, 114001+ (2015). [DOI: 10.1088/1748-9326/10/11/114001]

Meier, P.J., Cronin, K.R., Frost, E.A., Runge, T.M., Dale, B.E., Reinemann, D.J. & Detlor, J. "Potential for electrified vehicles to contribute to U.S. petroleum and climate goals and implications for advanced biofuels." Environmental Science & Technology 49,14, 8277–8286+ (2015). [DOI: 10.1021/acs.est.5b01691]

Mellmer, M.A., Gallo, J.M.R., Alonso, D.M. & Dumesic, J.A. "Selective production of levulinic acid from furfuryl alcohol in THF solvent sytems over H-ZSM-5." ACS Catalysis 5,6, 3354–3359+ (2015). [DOI: 10.1021/acscatal.5b00274]

Millar, N. & Robertson, P. "Nitrogen transfers and transformations in row-crop ecosystems." in The Ecology of Agricultural Landscapes: Long-Term Research on the Path to Sustainability. (eds. Hamilton, S. K., Doll, J. & Robertson, P.) 289–342+ (Oxford University Press, 2015). [DOI: isbn: 978-0-19-977335-0]

Mooney, D.F., Barham, B.L. & Lian, C. "Inelastic and fragmented farm supply response to second-generation bioenergy feedstocks: ex ante survey evidence from Wisconsin." Applied Economic Perspectives and Policy 37,2, 287–310+ (2015). [DOI: 10.1093/aepp/ppu033]

Murfin, K.E., Lee, M.-M., Klassen, J.L., McDonald, B.R., Larget, B., Forst, S., Stock, P., Currie, C.R. & Goodrich-Blair, H. "Xenorhabdus bovienii strain diversity impacts coevolution and symbiotic maintenance with Steinernema spp. nematode hosts." mBio 6,3, e00076–15+ (2015). [DOI: 10.1128/mBio.00076-15]

Myers, K.S., Park, D.M., Beauchene, N.A. & Kiley, P.J. "Defining bacterial regulons using ChIP-seq." Methods 86, 80–88+ (2015). [DOI: 10.1016/j.ymeth.2015.05.022]

Ohlrogge, J., Browse, J. & Somerville, C. "Lipids." in Biochemistry and Molecular Biology of Plants, 2nd Edition. 336–400+ (Wiley, 2015).

Parker, J.M., Santos, E.X. de los & Anderson, C.W. "Learning progressions and climate change." The American Biology Teacher 77,4, 232–237+ (2015). [DOI: 10.1525/abt.2015.77.4.2]

Pattathil, S., Hahn, M.G., Dale, B.E. & Chundawat, S.P.S. "Insights into plant cell wall structure, architecture, and integrity using glycome profiling of native and AFEX™-pre-treated biomass." Journal of Experimental Botany 66,14, 4279–4294+ (2015). [DOI: 10.1093/jxb/erv107]

Piotrowski, J.S., Okada, H., Lu, F., Li, S.C., Hinchman, L., Ranjan, A., Smith, D.L., Higbee, A.J., Ulbrich, A., Coon, J.J., et al. "Plant-derived antifungal agent poacic acid targets β-1,3-glucan." Proceedings of the National Academy of Sciences of the United States of America 112,12, E1490-E1497+ (2015). [DOI: 10.1073/pnas.1410400112]

Piotrowski, J.S., Simpkins, S.W., Li, S.C., Deshpande, R., McIlwain, S.J., Ong, I.M., Myers, C.L., Boone, C.B. & Andersen, R.J. "Chemical genomic profiling via barcode sequencing to predict compound mode of action." in Chemical Biology - Methods and Protocols. (eds. Hempel, J. E., Williams, C. H. & Hong, C. C.) vols. 1263 299–318+ (Springer, 2015). [DOI: 10.1007/978-1-4939-2269-7_23]

Pisithkul, T., Jacobson, T.B., O’Brien, T.J., Stevenson, D.M. & Amador-Noguez, D. "Phenolic amides are potent inhibitors of de novo nucleotide biosynthesis." Applied and Environmental Microbiology 81,17, 5761–5772+ (2015). [DOI: 10.1128/AEM.01324-15]

Pollard, M., Delamarter, D., Martin, T.M. & Shachar-Hill, Y. "Lipid labeling from acetate or glycerol in cultured embryos of Camelina sativa seeds: a tale of two substrates." Phytochemistry 118, 192–203+ (2015). [DOI: 10.1016/j.phytochem.2015.07.021]