Publications

When it comes to interdisciplinary collaboration, the titles of GLBRC publications speak for themselves. Each new year of operation has seen more publications from multiple labs that span our research themes, accelerating the Center's production of the basic research that generates technology to convert cellulosic biomass to advanced biofuels and bioproducts.

Year	Publication	Keywords
2014	Dale, B. "Sobering numbers." Resource Magazine November/December 2014, 25+ (2014). Google Scholar	Sustainability
2014	Dale, B.E., Anderson, J.E., Brown, R.C., Csonka, S., Dale, V.H., Herwick, G., Jackson, R.D., Jordan, N., Kaffka, S., Kline, K.L., et al. "Take a closer look: biofuels can support environmental, economic and social goals." Environmental Science & Technology 48,13, 7200–7203+ (2014). [DOI: 10.1021/es5025433] DOI Google Scholar	Sustainability
2014	Dale, B.E. & Kim, S. "Can the predictions of consequential life cycle assessment be tested in the real world? Comment on “Using Attributional Life Cycle Assessment to Estimate Climate-Change Mitigation..”." Journal of Industrial Ecology 18,3, 466-467+ (2014). [DOI: 10.1111/jiec.12151] DOI Google Scholar	Sustainability
2014	Dale, B.E. & Ong, R.G. "Design, implementation, and evaluation of sustainable bioenergy production systems." Biofuels, Bioproducts and Biorefining 8,4, 487-503+ (2014). [DOI: 10.1002/bbb.1504] DOI Google Scholar	Sustainability
2014	Deal, M.W., Xu, J., John, R., Zenone, T., Chen, J., Jasrotia, P., Kahmark, K., Bossenbroek, J. & Mayer, C. "Net primary production in three bioenergy crop systems following land conversion." Journal of Plant Ecology 7,5, 451-460+ (2014). [DOI: 10.1093/jpe/rtt057] DOI Google Scholar	Sustainability
2014	Deng, K., Takasuka, T.E., Heins, R., Cheng, X., Bergeman, L.F., Shi, J., Aschenbrener, R., Deutsch, S., Singh, S., Sale, K.L., et al. "Rapid kinetic characterization of glycosyl hydrolases based on oxime derivatization and nanostructure-initiator mass spectrometry (NIMS)." ACS Chemical Biology 9,7, 1470-1479+ (2014). [DOI: 10.1021/cb5000289] DOI Google Scholar	Deconstruction
2014	Diehl, B.G., Watts, H.D., Kubicki, J.D., Regner, M.R., Ralph, J. & Brown, N.R. "Towards lignin-protein crosslinking: amino acid adducts of a lignin model quinone methide." Cellulose 21, 1395-1407+ (2014). [DOI: 10.1007/s10570-014-0181-y] DOI Google Scholar	Feedstocks
2014	Evans, J., Kim, J., Childs, K.L., Vaillancourt, B., Crisovan, E., Nadety, A., Gerhardt, D.J., Richmond, T.A., Jeddeloh, J.A., Kaeppler, S.M., et al. "Nucleotide polymorphism and copy number variant detection using exome capture and next generation sequencing in the polyploidy grass Panicum virgatum." The Plant Journal 76,6, 993-1008+ (2014). [DOI: 10.1111/tpj.12601] DOI Google Scholar	Feedstocks
2014	Gall, D.L., Kim, H., Lu, F., Donohue, T.J., Noguera, D.R. & Ralph, J. "Stereochemical features of glutathione-dependent enzymes in the Sphingobium sp. strain SYK-6 β-aryl etherase pathway." Journal of Biological Chemistry 289,12, 8656-8667+ (2014). [DOI: 10.1074/jbc.M113.536250] DOI Google Scholar	Feedstocks, Conversion
2014	Gall, D.L., Ralph, J., Donohue, T.J. & Noguera, D.R. "A group of sequence-related sphingomonad enzymes catalyzes cleavage of β-aryl ether linkages in lignin β-guaiacyl and β-syringyl ether dimers." Environmental Science & Technology 48,20, 12454-12463+ (2014). [DOI: 10.1021/es503886d] DOI Google Scholar	Feedstocks, Conversion
2014	Gao, D., Haarmeyer, C., Balan, V., Whitehead, T.A., Dale, B.E. & Chundawat, S.P.S. "Lignin triggers irreversible cellulase loss during pretreated lignocellulosic biomass saccharification." Biotechnology for Biofuels 7, 175+ (2014). [DOI: 10.1186/s13068-014-0175-x] DOI Google Scholar	Deconstruction
2014	Gao, X., Kumar, R., Singh, S., Simmons, B., Balan, V., Dale, B. & Wyman, C.E. "Comparison of enzymatic reactivity of corn stover solids prepared by dilute acid, AFEX™, and ionic liquid pretreatments." Biotechnology for Biofuels 7, 71+ (2014). [DOI: 10.1186/1754-6834-7-71] DOI Google Scholar	Deconstruction
2014	Gardner, J.G., Crouch, L., Labourel, A., Forsberg, Z., Bukhman, Y.V., Vaaje-Kolstad, G., Gilbert, H.J. & Keating, D.H. "Systems biology defines the biological significance of redox-active proteins during cellulose degradation in an aerobic bacterium." Molecular Microbiology 94,5, 1121-1133+ (2014). [DOI: 10.1111/mmi.12821] DOI Google Scholar	Conversion
2014	Gaskell, J., Marty, A., Mozuch, M., Kersten, P.J., Bondurant, S.S., Sabat, G., Azarpira, A., Ralph, J., Skyba, O., Mansfield, S.D., et al. "Influence of Populus genotype on gene expression by the wood decay fungus Phanerochaete chrysosporium." Applied and Environmental Microbiology 80,18, 5828-5835+ (2014). [DOI: 10.1128/AEM.01604-14.] DOI Google Scholar	Feedstocks
2014	Gilmanov, T.G., Baker, J.M., Bernacchi, C.J., Billesbach, D.P., Burba, G.G., Castro, S., Chen, J., Eugster, W., Fischer, M.L., Gamon, J.A., et al. "Productivity and carbon dioxide exchange of leguminous crops: estimates from flux tower measurements." Agronomy Journal 106,2, 545-559+ (2014). [DOI: 10.2134/agronj2013.0270] DOI Google Scholar	Sustainability
2014	Green, A.R., Lewis, K.M., Barr, J.T., Jones, J.P., Lu, F., Ralph, J., Vermerris, W., Sattler, S.E. & Kang, C.H. "Determination of the structure and catalytic mechanism of Sorghum bicolor caffeic acid O-methyltransferase and the structural impact of three brown midrib12 mutations." Plant Physiology 165, 1440-1456+ (2014). [DOI: 10.1104/pp.114.241729] DOI Google Scholar	Feedstocks
2014	Greenler, J., Nye, L. & Tangen, T. "Cellulose breakdown." The Science Teacher 81, 3-11+ (2014). Google Scholar
2014	Haft, R.J.F., Keating, D.H., Schwaegler, T., Schwalbach, M.S., Vinokur, J., Tremaine, M., Peters, J.M., Kotlajich, M.V., Pohlmann, E.L., Ong, I.M., et al. "Correcting direct effects of ethanol on translation and transcription machinery confers ethanol tolerance in bacteria." Proceedings of the National Academy of Sciences of the United States of America 111,25, (2014). [DOI: 10.1073/pnas.1401853111] DOI Google Scholar	Conversion
2014	Haitjema, C.H., Boock, J.T., Natarajan, A., Dominguez, M.A., Gardner, J.G., Keating, D.H., Withers, S.T. & DeLisa, M.P. "Universal genetic assay for engineering extracellular protein expression." ACS Synthetic Biology 3,2, 74-82+ (2014). [DOI: 10.1021/sb400142b] DOI Google Scholar	Conversion
2014	Han, J., Sen, M., Alonso, D.M., Dumesic, J.A. & Maravelias, C.T. "A strategy for the simultaneous catalytic conversion of hemicellulose and cellulose from lignocellulosic biomass to liquid transportation fuels." Green Chemistry 16,2, 653-661+ (2014). [DOI: 10.1039/C3GC41511B] DOI Google Scholar	Conversion
2014	He, J., Pingali, S.V., Chundawat, S.P.S., Pack, A., Jones, D., Langan, P., Davison, B.H., Urban, V., Evans, B. & O’Neill, H. "Controlled incorporation of deuterium into bacterial cellulose." Cellulose 21,2, 927-936+ (2014). [DOI: 10.1007/s10570-013-0067-4] DOI Google Scholar
2014	Hedtcke, J.L., Sanford, G.R., Hadley, K.E. & Thelen, K.D. "Maximizing land use during switchgrass establishment in the North Central United States." Agronomy Journal 106,2, 596-604+ (2014). [DOI: 10.2134/agronj2013.0410] DOI Google Scholar	Sustainability
2014	Held, M.A., Danhof, L. & Brandizzi, F. "Identifying protein-protein interactions in Arabidopsis by co-immunoprecipitation of GFP-tagged proteins and proteomic detection." in Fluorescent Proteins. (Humana Press, 2014). Google Scholar	Feedstocks
2014	Herzberger, A.J., Duncan, D.S. & Jackson, R.D. "Bouncing back: plant-associated soil microbes respond rapidly to prairie establishment." PLOS ONE 9,12, (2014). [DOI: 10.1371/journal.pone.0115775] DOI Google Scholar	Sustainability
2014	Hirsch, C.D., Evans, J., Buell, R. & Hirsch, C.N. "Reduced representation approaches to interrogate genome diversity in large, repetitive plant genomes." Briefings in Functional Genomics 13,4, 257-267+ (2014). [DOI: 10.1093/bfgp/elt051] DOI Google Scholar	Feedstocks