Publications

When it comes to interdisciplinary collaboration, the titles of GLBRC publications speak for themselves. Each new year of operation has seen more publications from multiple labs that span our research themes, accelerating the Center's production of the basic research that generates technology to convert cellulosic biomass to advanced biofuels and bioproducts.

Year	Publication	Keywords
2015	Liu, J., Tjellstrom, H., McGlew, K., Shaw, V., Rice, A., Simpson, J., Kosma, D., Ma, W., Yang, W., Strawsine, M., et al. "Field production, purification and analysis of high-oleic acetyl-triacylglycerols from transgenic Camelina sativa." Industrial Crops and Products 65, 259-268+ (2015). [DOI: 10.1016/j.indcrop.2014.11.019] DOI Google Scholar	Feedstocks
2015	Liu, Y., Mellmer, M.A., Alonso, D.M. & Dumesic, J.A. "Effects of water on the copper-catalyzed conversion of hydroxymethylfurfural in tetrahydrofuran." ChemSusChem 8,23, 3983-3986+ (2015). [DOI: 10.1002/cssc.201501122] DOI Google Scholar	Conversion
2015	Long, M.R., Ong, W.K. & Reed, J.L. "Computational methods in metabolic engineering for strain design." Current Opinion in Biotechnology 34, 135-141+ (2015). [DOI: 10.1016/j.copbio.2014.12.019] DOI Google Scholar	Conversion
2015	Lu, F., Karlen, S.D., Regner, M., Kim, H., Ralph, S.A., Sun, R.-C., Kuroda, K.-ichi, Augustin, M.A., Mawson, R., Sabarez, H., et al. "Naturally p-hydroxybenzoylated lignins in palms." BioEnergy Research 8,3, 934-952+ (2015). [DOI: 10.1007/s12155-015-9583-4] DOI Google Scholar	Feedstocks
2015	Luterbacher, J.S., Alonso, D.M., Rand, J.M., Questell-Santiago, Y.M., Yeap, J.H., Pfleger, B.F. & Dumesic, J.A. "Solvent-enabled nonenzymatic sugar production from biomass for chemical and biological upgrading." ChemSusChem 8,8, 1317-1322+ (2015). [DOI: 10.1002/cssc.201403418] DOI Google Scholar	Conversion
2015	Luterbacher, J.S., Azarpira, A., Motagamwala, A.H., Lu, F., Ralph, J. & Dumesic, J.A. "Lignin monomer production integrated into the γ-valerolactone sugar platform." Energy & Environmental Science 8,9, 2657-2663+ (2015). [DOI: 10.1039/c5ee01322d] DOI Google Scholar	Feedstocks, Conversion
2015	Ma, W., Kong, Q., Grix, M., Mantyla, J.J., Yang, Y., Benning, C. & Ohlrogge, J.B. "Deletion of a C-terminal intrinsically disordered region of WRINKLED1 affects its stability and enhances oil accumulation in Arabidopsis." The Plant Journal 83,5, 864-874+ (2015). [DOI: 10.1111/tpj.12933] DOI Google Scholar	Feedstocks
2015	McCormick, R.F., Truong, S.K. & Mullet, J.E. "RIG: recalibration and interrelation of genomic sequence data with the GATK." G3: Genes \| Genomes \| Genetics 5,4, 655-665+ (2015). [DOI: 10.1534/g3.115.017012] DOI Google Scholar	Feedstocks
2015	McGlew, K., Shaw, V., Zhang, M., Kim, R.J., Yang, W., Shorrosh, B., Suh, M.C. & Ohlrogge, J. "An annotated database of Arabidopsis mutants of acyl lipid metabolism." Plant Cell Reports 34,4, 519-532+ (2015). [DOI: 10.1007/s00299-014-1710-8] DOI Google Scholar	Feedstocks
2015	Meehan, T.D. & Gratton, C. "A consistent positive association between landscape simplification and insecticide use across the Midwestern US from 1997 through 2012." Environmental Research Letters 10, 114001+ (2015). [DOI: 10.1088/1748-9326/10/11/114001] DOI Google Scholar	Sustainability
2015	Meier, P.J., Cronin, K.R., Frost, E.A., Runge, T.M., Dale, B.E., Reinemann, D.J. & Detlor, J. "Potential for electrified vehicles to contribute to U.S. petroleum and climate goals and implications for advanced biofuels." Environmental Science & Technology 49,14, 8277-8286+ (2015). [DOI: 10.1021/acs.est.5b01691] DOI Google Scholar	Sustainability
2015	Mellmer, M.A., Gallo, J.M.R., Alonso, D.M. & Dumesic, J.A. "Selective production of levulinic acid from furfuryl alcohol in THF solvent sytems over H-ZSM-5." ACS Catalysis 5,6, 3354-3359+ (2015). [DOI: 10.1021/acscatal.5b00274] DOI Google Scholar	Conversion
2015	Millar, N. & Robertson, P. "Nitrogen transfers and transformations in row-crop ecosystems." in The Ecology of Agricultural Landscapes: Long-Term Research on the Path to Sustainability. 289-342+ (Oxford University Press, 2015). [DOI: isbn: 978-0-19-977335-0] DOI Google Scholar	Sustainability
2015	Mooney, D.F., Barham, B.L. & Lian, C. "Inelastic and fragmented farm supply response to second-generation bioenergy feedstocks: ex ante survey evidence from Wisconsin." Applied Economic Perspectives and Policy 37,2, 287-310+ (2015). [DOI: 10.1093/aepp/ppu033] DOI Google Scholar	Sustainability
2015	Murfin, K.E., Lee, M.-M., Klassen, J.L., McDonald, B.R., Larget, B., Forst, S., Stock, P., Currie, C.R. & Goodrich-Blair, H. "Xenorhabdus bovienii strain diversity impacts coevolution and symbiotic maintenance with Steinernema spp. nematode hosts." mBio 6,3, (2015). [DOI: 10.1128/mBio.00076-15] DOI Google Scholar	Deconstruction
2015	Myers, K.S., Park, D.M., Beauchene, N.A. & Kiley, P.J. "Defining bacterial regulons using ChIP-seq." Methods 86, 80-88+ (2015). [DOI: 10.1016/j.ymeth.2015.05.022] DOI Google Scholar	Conversion
2015	Ohlrogge, J., Browse, J. & Somerville, C. "Lipids." in Biochemistry and Molecular Biology of Plants, 2nd Edition. 336-400+ (Wiley, 2015). Google Scholar	Feedstocks
2015	Parker, J.M., Santos, E.X. de los & Anderson, C.W. "Learning progressions and climate change." The American Biology Teacher 77,4, 232-237+ (2015). [DOI: 10.1525/abt.2015.77.4.2] DOI Google Scholar
2015	Pattathil, S., Hahn, M.G., Dale, B.E. & Chundawat, S.P.S. "Insights into plant cell wall structure, architecture, and integrity using glycome profiling of native and AFEX™-pre-treated biomass." Journal of Experimental Botany 66,14, 4279-4294+ (2015). [DOI: 10.1093/jxb/erv107] DOI Google Scholar	Deconstruction
2015	Piotrowski, J.S., Okada, H., Lu, F., Li, S.C., Hinchman, L., Ranjan, A., Smith, D.L., Higbee, A.J., Ulbrich, A., Coon, J.J., et al. "Plant-derived antifungal agent poacic acid targets β-1,3-glucan." Proceedings of the National Academy of Sciences of the United States of America 112,12, (2015). [DOI: 10.1073/pnas.1410400112] DOI Google Scholar	Feedstocks, Conversion
2015	Piotrowski, J.S., Simpkins, S.W., Li, S.C., Deshpande, R., McIlwain, S.J., Ong, I.M., Myers, C.L., Boone, C.B. & Andersen, R.J. "Chemical genomic profiling via barcode sequencing to predict compound mode of action." in Chemical Biology - Methods and Protocols. vol. 1263 299-318+ (Springer, 2015). [DOI: 10.1007/978-1-4939-2269-7_23] DOI Google Scholar	Conversion
2015	Pisithkul, T., Jacobson, T.B., O'Brien, T.J., Stevenson, D.M. & Amador-Noguez, D. "Phenolic amides are potent inhibitors of de novo nucleotide biosynthesis." Applied and Environmental Microbiology 81,17, 5761-5772+ (2015). [DOI: 10.1128/AEM.01324-15] DOI Google Scholar	Conversion
2015	Pollard, M., Delamarter, D., Martin, T.M. & Shachar-Hill, Y. "Lipid labeling from acetate or glycerol in cultured embryos of Camelina sativa seeds: a tale of two substrates." Phytochemistry 118, 192-203+ (2015). [DOI: 10.1016/j.phytochem.2015.07.021] DOI Google Scholar	Feedstocks
2015	Pollard, M., Martin, T.M. & Shachar-Hill, Y. "Lipid analysis of developing Camelina sativa seeds and cultured embryos." Phytochemistry 118, 23-32+ (2015). [DOI: 10.1016/j.phytochem.2015.07.022] DOI Google Scholar	Feedstocks
2015	Rachid, C.T.C.C., Balieiro, F.C., Fonseca, E.S., Peixoto, R.S., Chaer, G.M., Tiedje, J.M. & Rosado, A.S. "Intercropped silviculture systems, a key to achieving soil fungal community management in Eucalyptus plantations." PLOS ONE 10,2, (2015). [DOI: 10.1371/journal.pone.0118515] DOI Google Scholar	Sustainability