Publications

When it comes to interdisciplinary collaboration, the titles of GLBRC publications speak for themselves. Each new year of operation has seen more publications from multiple labs that span our research themes, accelerating the Center's production of the basic research that generates technology to convert cellulosic biomass to advanced biofuels and bioproducts.

Year	Publication	Keywords
2015	Serate, J., Xie, D., Pohlmann, E., Shabani, M., Hinchman, L., Higbee, A., McGee, M., La Reau, A., Klinger, G.E., Li, S., et al. "Controlling microbial contamination during hydrolysis of AFEX-pretreated corn stover and switchgrass: effects on hydrolysate composition, microbial response and fermentation." Biotechnology for Biofuels 8, 180+ (2015). [DOI: 10.1186/s13068-015-0356-2] DOI Google Scholar	Feedstocks, Deconstruction, Conversion, Sustainability
2015	Singh, S., Cheng, G., Sathitsuksanoh, N., Wu, D., Varanasi, P., George, A., Balan, V., Gao, X., Kumar, R., Dale, B.E., et al. "Comparison of different biomass pretreatment techniques and their impact on chemistry and structure." Frontiers in Energy Research 2, 62+ (2015). [DOI: 10.3389/fenrg.2014.00062] DOI Google Scholar	Deconstruction
2015	Sinistore, J.C., Reinemann, D.J., Izaurralde, C., Cronin, K.R., Meier, P.J., Runge, T.M. & Zhang, X. "Life cycle assessment of switchgrass cellulosic ethanol production in the Wisconsin and Michigan agricultural contexts." BioEnergy Research 897-909+ (2015). [DOI: 10.1007/s12155-015-9611-4] DOI Google Scholar	Sustainability
2015	Skevas, T., Hayden, N.J., Swinton, S.M. & Lupi, F. "Landowner willingness to supply marginal land for bioenergy production." Land Use Policy 50, 507-517+ (2015). [DOI: 10.1016/j.landusepol.2015.09.027] DOI Google Scholar	Sustainability
2015	Slater, S.C., Simmons, B.A., Rogers, T.S., Phillips, M.F., Nordahl, K. & Davison, B.H. "The DOE Bioenergy Research Centers: history, operations, and scientific output." BioEnergy Research 8,3, 881-896+ (2015). [DOI: 10.1007/s12155-015-9660-8] DOI Google Scholar
2015	Slininger, P.J., Shea-Andersh, M.A., Thompson, S.R., Dien, B.S., Kurtzman, C.P., Balan, V., Sousa, L. da C., Uppugundla, N., Dale, B.E. & Cotta, M.A. "Evolved strains of Scheffersomyces stipitis reaching high ethanol productivity on acid- and base-pretreated biomass hydrolyzate at high solids loading." Biotechnology for Biofuels 8,60, 27+ (2015). [DOI: 10.1186/s13068-015-0239-6] DOI Google Scholar	Deconstruction
2015	Smith, R.A., Gonzales-Vigil, E., Karlen, S.D., Park, J.-Y., Lu, F., Wilkerson, C.G., Samuels, L., Ralph, J. & Mansfield, S.D. "Engineering monolignol p-coumarate conjugates into poplar and Arabidopsis lignins." Plant Physiology 169, 2992-3001+ (2015). [DOI: 10.1104/pp.15.00815] DOI Google Scholar	Feedstocks
2015	Spero, M.A., Aylward, F.O., Currie, C.R. & Donohue, T.J. "Phylogenomic analysis and predicted physiological role of the proton-translocating NADH:quinone oxidoreductase (complex I) across bacteria." mBio 6,2, (2015). [DOI: 10.1128/mBio.00389-15] DOI Google Scholar	Conversion
2015	Su, Y.-K., Willis, L.B. & Jeffries, T.W. "Effects of aeration on growth, ethanol and polyol accumulation by Spathaspora passalidarum NRRL Y-27907 and Scheffersomyces stipitis NRRL Y-7124." Biotechnology and Bioengineering 112,3, 457-469+ (2015). [DOI: 10.1002/bit.25445] DOI Google Scholar	Conversion
2015	Sylvester, K., Wang, Q.-M.M., James, B., Mendez, R., Hulfachor, A.B. & Hittinger, C.T. "Temperature and host preferences drive the diversification of Saccharomyces and other yeasts: a survey and the discovery of eight new yeast species." FEMS Yeast Research 15,3, (2015). [DOI: 10.1093/femsyr/fov002] DOI Google Scholar	Conversion
2015	Tang, X., Sousa, L. da C., Jin, M., Chundawat, S.P.S., Chambliss, K., Lau, M.W., Xiao, Z., Dale, B.E. & Balan, V. "Designer synthetic media for studying microbial-catalyzed biofuel production." Biotechnology for Biofuels 8, 1+ (2015). [DOI: 10.1186/s13068-014-0179-6] DOI Google Scholar	Deconstruction
2015	Tanger, P., Vega-Sánchez, M.E., Fleming, M., Tran, K., Singh, S., Abrahamson, J.B., Jahn, C.E., Santoro, N., Naredo, E.B., Baraoidan, M., et al. "Cell wall composition and bioenergy potential of rice straw tissues are influenced by environment, tissue type, and genotype." BioEnergy Research 8, 1165-1182+ (2015). [DOI: 10.1007/s12155-014-9573-y] DOI Google Scholar
2015	Tiemann, L.K. & Grandy, S. "Mechanisms of soil carbon accrual and storage in bioenergy cropping systems." Global Change Biology – Bioenergy 7,2, 161-174+ (2015). [DOI: 10.1111/gcbb.12126] DOI Google Scholar	Sustainability
2015	Tiemann, L.K., Grandy, A.S., Atkinson, E.E., Marin-Spiotta, E. & McDaniel, M.D. "Crop rotational diversity enhances belowground communities and functions in an agroecosystem." Ecology Letters 18,8, 761-771+ (2015). [DOI: 10.1111/ele.12453] DOI Google Scholar	Sustainability
2015	Tjellstrom, H., Strawsine, M. & Ohlrogge, J.B. "Tracking synthesis and turnover of triacylglycerol in leaves." Journal of Experimental Botany 66,5, 1453-1461+ (2015). [DOI: 10.1093/jxb/eru500] DOI Google Scholar	Feedstocks
2015	Truong, S.K., McCormick, R.F., Rooney, W.L. & Mullet, J.E. "Harnessing genetic variation in leaf angle to increase productivity of Sorghum bicolor." Genetics 201,3, 1229-1238+ (2015). [DOI: 10.1534/genetics.115.178608] DOI Google Scholar	Feedstocks
2015	Tsai, C.-H., Zienkiewicz, K., Amstutz, C.L., Brink, B.G., Warakanont, J., Roston, R. & Benning, C. "Dynamics of protein and polar lipid recruitment during lipid droplet assembly in Chlamydomonas reinhardtii." The Plant Journal 83,4, 650-660+ (2015). [DOI: 10.1111/tpj.12917] DOI Google Scholar	Feedstocks
2015	Tsuji, Y., Vanholme, R., Tobimatsu, Y., Ishikawa, Y., Foster, C.E., Kamimura, N., Hishiyama, S., Hashimoto, S., Shino, A., Hara, H., et al. "Introduction of chemically labile substructures into Arabidopsis lignin through the use of LigD, the Cα-dehydrogenase from Sphingobium sp. strain SYK-6." Plant Biotechnology Journal 13,6, 821-832+ (2015). [DOI: 10.1111/pbi.12316] DOI Google Scholar	Feedstocks
2015	Underkofler, K.A., Teixeira, R.E., Pietsch, S.A., Knapp, K.G. & Raines, R.T. "Separation of lignin from corn stover hydrolysate with quantitative recovery of ionic liquid." ACS Sustainable Chemistry and Engineering 3,4, 606-613+ (2015). [DOI: 10.1021/sc500731c] DOI Google Scholar	Conversion
2015	Wagner, A., Tobimatsu, Y., Phillips, L., Flint, H., Geddes, B., Lu, F. & Ralph, J. "Syringyl lignin production in conifers: proof of concept in a pine tracheary element system." Proceedings of the National Academy of Sciences of the United States of America 112,19, 6218-6223+ (2015). [DOI: 10.1073/pnas.1411926112] DOI Google Scholar	Feedstocks
2015	Walker, J.A., Takasuka, T.E., Deng, K., Bianchetti, C.M., Udell, H.S., Prom, B.M., Kim, H., Adams, P.D., Northen, T.R. & Fox, B.G. "Multifunctional cellulase catalysis targeted by fusion to different carbohydrate-binding modules." Biotechnology for Biofuels 8, 220+ (2015). [DOI: 10.1186/s13068-015-0402-0] DOI Google Scholar	Deconstruction
2015	Wang, Q., Fish, J.A., Gilman, M., Sun, Y., Brown, T., Tiedje, J.M. & Cole, J.R. "Xander: employing a novel method for efficient gene-targeted metagenomic assembly." Microbiome 3, 32+ (2015). [DOI: 10.1186/s40168-015-0093-6] DOI Google Scholar	Sustainability
2015	Wieder, W.R., Grandy, A.S., Kallenbach, C.M., Taylor, P.G. & Bonan, G.B. "Representing life in the Earth system with soil microbial functional traits in the MIMICS model." Geoscientific Model Development 8, 1789-1808+ (2015). [DOI: 10.5194/gmdd-8-2011-2015] DOI Google Scholar	Sustainability
2015	Wyman, C.E. & Dale, B.E. "Producing biofuels via the sugar platform." Chemical Engineering Progress Magazine 111,3, 45-57+ (2015). Google Scholar	Sustainability
2015	Xue, S., Uppugundla, N., Bowman, M.J., Cavalier, D., Sousa, L. da C., Dale, B.E. & Balan, V. "Sugar loss and enzyme inhibition due to oligosaccharide accumulation during high solids-loading enzymatic hydrolysis." Biotechnology for Biofuels 8, 195+ (2015). [DOI: 10.1186/s13068-015-0378-9] DOI Google Scholar	Deconstruction