| Year | Publication | Keywords |
|---|---|---|
| 2024 | Karlen, S.D., Timokhin, V.I., Sener, C., Mobley, J.K., Runge, T. & Ralph, J. "Production of biomass-derived p-hydroxybenzamide: synthesis of p-aminophenol and paracetamol." ChemSusChem 17,8, e202400234+ (2024). [DOI: 10.1002/cssc.202400234] |
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| 2024 | Guber, A. & Kravchenko, A. "2-D soil zymography: accounting for the spatial variation of pH." Rhizosphere 29, 100862+ (2024). [DOI: 10.1016/j.rhisph.2024.100862] |
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| 2024 | Haan, N.L., Helms, J.A. & Landis, D. "Bioenergy cropping systems shape ant community composition and functional roles." Frontiers in Conservation Science 4, 1283225+ (2024). [DOI: 10.3389/fcosc.2023.1283225] |
Sustainability |
| 2024 | Hall, A.N., Hall, B.W., Kinney, K.J., Olsen, G.G., Banta, A.B., Noguera, D.R., Donohue, T.J. & Peters, J.M. "Tools for genetic engineering and gene expression control in Novosphingobium aromaticivorans and Rhodobacter sphaeroides." Applied and Environmental Microbiology 90,10, e00348–24+ (2024). [DOI: 10.1128/aem.00348-24] |
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| 2024 | Hao, Y., Lu, F., Pyo, S.-W., Kim, M.-H., Ko, J.-H., Yan, X., Ralph, J. & Li, Q. "PagMYB128 regulates secondary cell wall formation by direct activation of cell wall biosynthetic genes during wood formation in poplar." Journal of Integrative Plant Biology 66,8, 1658–1674+ (2024). [DOI: 10.1111/jipb.13717] |
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| 2024 | Harrison, M.-C., Opulente, D.A., Wolters, J.F., Shen, X.-X., Zhou, X., Groenewald, M., Hittinger, C.T., Rokas, A. & LaBella, A.L. "Exploring Saccharomycotina yeast ecology through an ecological ontology framework." Yeast 41,10, 615–628+ (2024). [DOI: 10.1002/yea.3981] |
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| 2024 | Harrison, M.-C., Ubbelohde, E.J., LaBella, A.L., Opulente, D.A., Wolters, J.F., Zhou, X., Shen, X.-X., Groenewald, M., Hittinger, C.T. & Rokas, A. "Machine learning enables identification of an alternative yeast galactose utilization pathway." Proceedings of the National Academy of Sciences of the United States of America 121,18, e2315314121+ (2024). [DOI: 10.1073/pnas.2315314121] |
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| 2024 | Hoang, D.Q., Wilson, L.R., Scheftgen, A.J., Suen, G. & Currie, C.R. "Disturbance-diversity relationships of microbial communities change based on growth substrate." mSystems 9,2, e00887–23+ (2024). [DOI: 10.1128/msystems.00887-23] |
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| 2024 | Hurt, A., Bibik, J.D., Martinez-Gomez, N.C. & Hamberger, B. "Engineering terpene production pathways in Methylobacterium extorquens AM1." Microorganisms 12,3, 500+ (2024). [DOI: 10.3390/microorganisms12030500] |
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| 2024 | Jamieson, Z., Clar, J.F. & Runge, T. "Cellulose nanofibers as rheological modifiers to improve biomass slurry processing and fermentation." Fermentation 10, 626+ (2024). [DOI: 10.3390/ fermentation10120626] |
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| 2024 | Jiao, Y., Nigam, D., Barry, K., Daum, C., Yoshinaga, Y., Lipzen, A., Khan, A., Parasa, S.-P., Wei, S., Lu, Z., et al. "A large sequenced mutant library – valuable reverse genetic resource that covers 98% of sorghum genes." The Plant Journal 117,5, 1543–1557+ (2024). [DOI: 10.1111/tpj.16582] |
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| 2024 | Karimzadegan, V., Koirala, M., Sobhanverdi, S., Merindol, N., Majhi, B.B., Gelinas, S.-E., Timokhin, V.I., Ralph, J., Dastmalchi, M. & Desgagne-Penix, I. "Characterization of cinnamate 4-hydroxylase (CYP73A) and p-coumaroyl 3’-hydroxylase (CYP98A) from Leucojum aestivum, a source of Amaryllidaceae alkaloids." Plant Physiology and Biochemistry 210, 108612+ (2024). [DOI: 10.1016/j.plaphy.2024.108612] |
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| 2024 | Karlen, S.D., Timokhin, V.I., Sener, C., Mobley, J.K., Runge, T. & Ralph, J. "Production of biomass-derived p-hydroxybenzamide: synthesis of p-aminophenol and paracetamol." ChemSusChem 17,8, e202400234+ (2024). [DOI: 10.1002/cssc.202400234] |
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| 2023 | Casler, M.D., Lee, D., Mitchell, R.B., Moore, K.J., Adler, P.R., Sulc, M., Johnson, K.D., Kallenbach, R.L., Boe, A.R., Mathison, R.D., et al. "Biomass quality responses to selection for increased biomass yield in perennial energy grasses." BioEnergy Research 16,2, 877–885+ (2023). [DOI: 10.1007/s12155-022-10513-2] |
Sustainability |
| 2023 | Dong, X., Mayes, H.B., Morreel, K., Katahira, R., Li, Y., Ralph, J., Black, B.A. & Beckham, G.T. "Energy-resolved mass spectrometry as a tool for identification of lignin depolymerization products." ChemSusChem 16,1, e202201441+ (2023). [DOI: 10.1002/cssc.202201441] |
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| 2023 | Hellinger, J., Kim, H., Ralph, J. & Karlen, S.D. "p-Coumaroylation of lignin occurs outside of commelinid monocots in the eudicot genus Morus (mulberry)." Plant Physiology 191,2, 854–861+ (2023). [DOI: 10.1093/plphys/kiac485] |
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| 2023 | Ko, D.K. & Brandizzi, F. "Coexpression network construction and visualization from transcriptomes underlying ER stress responses." in Plant Proteostasis. Methods in Molecular Biology. vols. 2581 385–401+ (Humana, 2023). [DOI: 10.1007/978-1-0716-2784-6_27] |
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| 2023 | Mottiar, Y., Karlen, S.D., Goacher, R.E., Ralph, J. & Mansfield, S.D. "Metabolic engineering of p-hydroxybenzoate in poplar lignin." Plant Biotechnology Journal 21,1, 176–188+ (2023). [DOI: 10.1111/pbi.13935] |
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| 2023 | Mottiar, Y., Smith, R.A., Karlen, S.D., Ralph, J. & Mansfield, S.D. "Evolution of p-coumaroylated lignin in eudicots provides new tools for cell wall engineering." New Phytologist 237,1, 251–264+ (2023). [DOI: 10.1111/nph.18518] |
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| 2023 | Roney, H.E. & Walker, B.J. "Photon to plate: a holistic view of photosynthetic and anthropogenic energy fluxes." Food and Energy Security 12,1, e348+ (2023). [DOI: 10.1002/fes3.348] |
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| 2023 | Alberge, F., Lakey, B.D., Schaub, R.E., Dohnalkova, A.C., Lemmer, K.C., Dillard, J.P., Noguera, D.R. & Donohue, T.J. "A previously uncharacterized divisome-associated lipoprotein, DalA, is needed for normal cell division in Rhodobacterales." mBio 14,4, e01203–23+ (2023). [DOI: 10.1128/mbio.01203-23] |
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| 2023 | Barros, K.O., Alvarenga, F.B.M., Magni, G., Souza, G.F.L., Abegg, M.A., Palladino, F., da Silva, S.S., Rodrigues, R.C.L.B., Sato, T.K., Hittinger, C.T., et al. "The Brazilian Amazonian rainforest harbors a high diversity of yeasts associated with rotting wood, including many candidates for new yeast species." Yeast 40,2, 84–101+ (2023). [DOI: 10.1002/yea.3837] |
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| 2023 | Basyal, B. & Walker, B.J. "Arbuscular mycorrhizal fungi enhance yield and photosynthesis of switchgrass (Panicum virgatum L.) under extreme drought and alters the biomass composition of the host plant." Biomass and Bioenergy 177, 106936+ (2023). [DOI: 10.1016/j.biombioe.2023.106936] |
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| 2023 | Bell-Dereske, L.P., Benucci, G.M.N., da Costa, P.B., Bonito, G., Friesen, M.L., Tiemann, L.K. & Evans, S.E. "Regional biogeography versus intra-annual dynamics of the root and soil microbiome." Environmental Microbiome 18,1, 50+ (2023). [DOI: 10.1186/s40793-023-00504-x] |
Sustainability |
| 2023 | Benucci, G.M.N., Toosi, E.R., Yang, F., Marsh, T.L., Bonito, G.M. & Kravchenko, A. "The microbiome structure of decomposing plant leaves in soil depends on plant species, soil pore sizes, and soil moisture content." Frontiers in Microbiology 14, 1172862+ (2023). [DOI: 10.3389/fmicb.2023.1172862] |
