Publications

Albrecht, M., Kleijn, D., Williams, N.M., Tschumi, M., Blaauw, B.R., Bommarco, R., Campbell, A.J., Dainese, M., Drummond, F.A., Entling, M.H., et al. "The effectiveness of flower strips and hedgerows on pest control, pollination services and crop yield: a quantitative synthesis." Ecology Letters 23,10, 1488–1498+ (2020). [DOI: 10.1111/ele.13576]

Anson, C.W. & Stahl, S.S. "Mediated fuel cells: soluble redox mediators and their applications to electrochemical reduction of O2 and oxidation of H2, alcohols, biomass, and complex fuels." Chemical Reviews 120,8, 3749–3786+ (2020). [DOI: 10.1021/acs.chemrev.9b00717]

Azodi, C.B., Lloyd, J.P. & Shiu, S.-H. "The cis-regulatory codes of response to combined heat and drought stress in Arabidopsis thaliana." NAR Genomics and Bioinformatics 2,3, (2020). [DOI: 10.1093/nargab/lqaa049]

Azodi, C.B., Pardo, J., VanBuren, R., Campos, G. de L. & Shiu, S.-H. "Transcriptome-based prediction of complex traits in maize." The Plant Cell 32, 139–151+ (2020). [DOI: 10.1105/tpc.19.00332]

Azodi, C.B., Tang, J. & Shiu, S.-H. "Opening the black box: interpretable machine learning for geneticists." Trends in Genetics 36,6, 442–455+ (2020). [DOI: 10.1016/j.tig.2020.03.005]

Banerjee, R., Weisenhorn, E., Schwartz, K.J., Myers, K.S., Glasner, J.D., Perna, N.T., Coon, J.J., Welch, R.A. & Kiley, P.J. "Tailoring a global iron regulon to a uropathogen." mBio 11,2, (2020). [DOI: 10.1128/mBio.00351-20]

Banta, A.B., Enright, A.L., Siletti, C. & Peters, J.M. "A high-efficacy CRISPR interference system for gene function discovery in Zymomonas mobilis." Applied and Environmental Microbiology 86,23, (2020). [DOI: 10.1128/AEM.01621-20]

Banta, A.B., Ward, R.D., Tran, J.S., Bacon, E.E. & Peters, J.M. "Programmable gene knockdown in diverse bacteria using mobile-CRISPRi." Current Protocols in Microbiology 59,1, (2020). [DOI: 10.1002/cpmc.130]

Bao, Y., Song, W.-M., Wang, P., Yu, X., Li, B., Jiang, C., Shiu, S.-H., Zhang, H. & Bassham, D.C. "COST1 regulates autophagy to control plant drought tolerance." Proceedings of the National Academy of Sciences of the United States of America 117,13, 7482–7493+ (2020). [DOI: 10.1073/pnas.1918539117]

Benucci, G.M.N., Rennick, B. & Bonito, G. "Patient propagules: Do soil archives preserve the legacy of fungal and prokaryotic communities?" PLOS ONE 15,8, (2020). [DOI: 10.1371/journal.pone.0237368]

Bhandari, D.D. & Brandizzi, F. "Plant endomembranes and cytoskeleton: moving targets in immunity." Current Opinion in Plant Biology 58, 8–16+ (2020). [DOI: 10.1016/j.pbi.2020.09.003]

Bilyera, N., Kuzyakova, I., Guber, A., Razavi, B.S. & Kuzyakov, Y. "How “hot” are hotspots: statistically localizing the high-activity areas on soil and rhizosphere images." Rhizosphere 16, 100259+ (2020). [DOI: 10.1016/j.rhisph.2020.100259]

Chang, H., Bajaj, I., Huber, G.W., Maravelias, C.T. & Dumesic, J.A. "Catalytic strategy for conversion of fructose to organic dyes, polymers, and liquid fuels." Green Chemistry 22, 5285–5295+ (2020). [DOI: 10.1039/D0GC01576H]

Chang, H., Huber, G.W. & Dumesic, J.A. "Chemical-switching strategy for synthesis and controlled release of norcantharimides from a biomass-derived chemical." ChemSusChem 13,19, 5213–5219+ (2020). [DOI: 10.1002/cssc.202001471]

Chew, A.K., Jiang, S., Zhang, W., Zavala, V.M. & Van Lehn, R.C. "Fast predictions of liquid-phase acid-catalyzed reaction rates using molecular dynamics simulations and convolutional neural networks." Chemical Science 11, 12464–12476+ (2020). [DOI: 10.1039/D0SC03261A]

Chew, A.K., Walker, T.W., Shen, Z., Demir, B., Witteman, L., Euclide, J., Huber, G.W., Dumesic, J.A. & Van Lehn, R.C. "Effect of mixed-solvent environments on the selectivity of acid-catalyzed dehydration reactions." ACS Catalysis 10, 1679–1691+ (2020). [DOI: 10.1021/acscatal.9b03460]

Chundawat, S.P.S., Pal, R.K., Zhao, C., Campbell, T., Teymouri, F., Videto, J., Nielson, C., Wieferich, B., Sousa, L., Dale, B.E., et al. "Ammonia fiber expansion (AFEX) pretreatment of lignocellulosic biomass." Journal of Visualized Experiments 158, (2020). [DOI: 10.3791/57488]

Dahlin, K.M., Akanga, D., Lombardozzi, D.L., Reed, D.E., Shirkey, G., Lei, C., Abraha, M. & Chen, J. "Challenging a global land surface model in a local socio-environmental system." Land 9, 398+ (2020). [DOI: 10.3390/land9100398]

De Meester, B., Calderón, B.M., de Vries, L., Pollier, J., Goeminne, G., Van Doorsselaere, J., Chen, M., Ralph, J., Vanholme, R. & Boerjan, W. "Tailoring poplar lignin without yield penalty by combining a null and haploinsufficient CINNAMOYL-CoA REDUCTASE2 allele." Nature Communications 11,1, 5020+ (2020). [DOI: 10.1038/s41467-020-18822-w]

del Rio, J.C., Rencoret, J., Gutiérrez, A., Elder, T., Kim, H. & Ralph, J. "Lignin monomers from beyond the canonical monolignol biosynthetic pathway: another brick in the wall." ACS Sustainable Chemistry & Engineering 8,13, 4997–5012+ (2020). [DOI: 10.1021/acssuschemeng.0c01109]

Demir, B., Kropp, T., Rivera-Dones, K.R., Gilcher, E.B., Huber, G.W., Mavrikakis, M. & Dumesic, J.A. "A self-adjusting platinum surface for acetone hydrogenation." Proceedings of the National Academy of Sciences of the United States of America 117,7, 3446–3450+ (2020). [DOI: 10.1073/pnas.1917110117]

Dharampal, P.S., Diaz-Garcia, L., Haase, M.A.B., Zalapa, J., Currie, C.R., Hittinger, C.T. & Steffan, S.A. "Microbial diversity associated with the pollen stores of captive-bred bumble bee colonies." Insects 11,4, 250+ (2020). [DOI: 10.3390/insects11040250]

Dirks, A.C. & Jackson, R.D. "Community structure of arbuscular mycorrhizal fungi in soils of switchgrass harvested for bioenergy." Applied and Environmental Microbiology 86,19, (2020). [DOI: 10.1128/AEM.00880-20]

Doud, D.F.R., Bowers, R.M., Schulz, F., De Raad, M., Deng, K., Tarver, A., Glasgow, E., Meulen, K.V., Fox, B., Deutsch, S., et al. "Function-driven single-cell genomics uncovers cellulose-degrading bacteria from the rare biosphere." The ISME Journal 14, 659–675+ (2020). [DOI: 10.1038/s41396-019-0557-y]

Elder, T., del Rio, J.C., Ralph, J., Rencoret, J., Kim, H., Beckham, G.T. & Crowley, M.F. "Coupling and reactions of lignols and new lignin monomers: a density functional theory study." ACS Sustainable Chemistry & Engineering 8,30, 11033–11045+ (2020). [DOI: 10.1021/acssuschemeng.0c02880]