| Year | Publication | Keywords |
|---|---|---|
| 2023 | Tilhou, N.W., Poudel, H.P., Lovell, J., Mamidi, S., Schmutz, J., Daum, C., Zane, M., Yoshinaga, Y., Lipzen, A. & Casler, M.D. "Genomic prediction of switchgrass winter survivorship across diverse lowland populations." G3: Genes | Genomes | Genetics 13,3, jkad014+ (2023). [DOI: 10.1093/g3journal/jkad014] |
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| 2023 | Venkataraman, M., Yñigez-Gutierrez, A., Infante, V., MacIntyre, A., Fernandes-Júnior, P.I., Ané, J.-M. & Pfleger, B. "Synthetic biology toolbox for nitrogen-fixing soil microbes." ACS Synthetic Biology 12,12, 3623–3634+ (2023). [DOI: 10.1021/acssynbio.3c00414] |
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| 2023 | Wagner, E.R. & Gasch, A.P. "Advances in S. cerevisiae engineering for xylose fermentation and biofuel production: balancing growth, metabolism, and defense." Journal of Fungi 9,8, 786+ (2023). [DOI: 10.3390/jof9080786] |
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| 2023 | Wagner, E.R., Nightingale, N.M., Jen, A., Overmyer, K.A., McGee, M., Coon, J.J. & Gasch, A.P. "PKA regulatory subunit Bcy1 couples growth, lipid metabolism, and fermentation during anaerobic xylose growth in Saccharomyces cerevisiae." PLOS Genetics 19,7, e1010593+ (2023). [DOI: 10.1371/journal.pgen.1010593] |
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| 2023 | Walters, K.A., Mohan, G., Myers, K.S., Ingle, A.T., Donohue, T.J. & Noguera, D.R. "A metagenome-level analysis of a microbial community fermenting ultra-filtered milk permeate." Frontiers in Bioengineering and Biotechnology 11, 1173656+ (2023). [DOI: 10.3389/fbioe.2023.1173656] |
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| 2023 | Wang, Y., Chen, M., Yang, Y., Ralph, J. & Pan, X. "Efficient O-demethylation of lignin-derived aromatic compounds under moderate conditions." RSC Advances 13,9, 5925–5932+ (2023). [DOI: 10.1039/d3ra00245d] |
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| 2023 | White, R.A., Garoutte, A., McLachlan, E.E., Tiemann, L.K., Evans, S. & Friesen, M.L. "Genome-resolved metagenomics of nitrogen transformations in the switchgrass rhizosphere microbiome on marginal lands." Agronomy 13,5, 1294+ (2023). [DOI: 10.3390/agronomy13051294] |
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| 2023 | Witvrouw, K., Kim, H., Vanholme, R., Goeminne, G., Ralph, J., Boerjan, W. & Vanholme, B. "Reassessing the claimed cytokinin-substituting activity of dehydrodiconiferyl alcohol glucoside." Proceedings of the National Academy of Sciences of the United States of America 120,9, e2123301120+ (2023). [DOI: 10.1073/pnas.2123301120] |
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| 2023 | Wolters, J.F., Labella, A.L., Opulente, D.A., Rokas, A. & Hittinger, C.T. "Mitochondrial genome diversity across the subphylum Saccharomycotina." Frontiers in Microbiology 14, 1268944+ (2023). [DOI: 10.3389/fmicb.2023.1268944] |
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| 2023 | Yang, J.E., Larson, M.R., Sibert, B.S., Kim, J.Y., Parrell, D., Sanchez, J.C., Pappas, V., Kumar, A., Cai, K., Thompson, K., et al. "Correlative montage parallel array cryo-tomography for in situ structural cell biology." Nature Methods 20,10, 1537–1543+ (2023). [DOI: 10.1038/s41592-023-01999-5] |
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| 2022 | Alred, B., Haan, N., Landis, D.A. & Szűcs, M. "Does the presence of the biological control agent, Hypena opulenta (Lepidoptera: Erebidae) on swallow-worts deter monarch oviposition?" Environmental Entomology 51,1, 77–82+ (2022). [DOI: 10.1093/ee/nvab121] |
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| 2022 | Beach, N.K., Myers, K.S., Donohue, T.J. & Noguera, D.R. "Metagenomes from 25 low-abundance microbes in a partial nitritation anammox microbiome." Microbiology Resource Announcements 11,6, e0021222+ (2022). [DOI: 10.1128/mra.00212-22] |
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| 2022 | da Costa, P.B., Benucci, G.M.N., Chou, M.-Y., Van Wyk, J., Chretien, M. & Bonito, G. "Soil origin and plant genotype modulate switchgrass aboveground productivity and root microbiome assembly." mBio 13,2, e00079–22+ (2022). [DOI: 10.1128/mbio.00079-22] |
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| 2022 | Bibik, J.D., Weraduwage, S.M., Banerjee, A., Robertson, K., Espinoza-Corral, R., Sharkey, T.D., Lundquist, P.K. & Hamberger, B.R. "Pathway engineering, re-targeting, and synthetic scaffolding improve the production of squalene in plants." ACS Synthetic Biology 11,6, 2121–2133+ (2022). [DOI: 10.1021/acssynbio.2c00051] |
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| 2022 | Bloom, E.H., Graham, K.K., Haan, N.L., Heck, A.R., Gut, L.J., Landis, D.A., Milbrath, M., Quinlan, G.M., Wilson, J.K., Zhang, Y., et al. "Responding to the US national pollinator plan: a case study in Michigan." Frontiers in Ecology and the Environment 20,2, 84–92+ (2022). [DOI: 10.1002/fee.2430] |
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| 2022 | Bouché, F., Woods, D.P., Linden, J., Li, W., Mayer, K.S., Amasino, R.M. & Périlleux, C. "EARLY FLOWERING 3 and photoperiod sensing in Brachypodium distachyon." Frontiers in Plant Science 12, 769194+ (2022). [DOI: 10.3389/fpls.2021.769194] |
Feedstocks |
| 2022 | Buessecker, S., Sarno, A.F., Reynolds, M.C., Chavan, R., Park, J., Ortiz, M.F., Pérez-Castillo, A.G., Pisco, G.P., Urquiza-Muñoz, J.D., Reis, L.P., et al. "Coupled abiotic-biotic cycling of nitrous oxide in tropical peatlands." Nature Ecology & Evolution 6, 1881–1890+ (2022). [DOI: 10.1038/s41559-022-01892-y] |
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| 2022 | Case, N.T., Berman, J., Blehert, D.S., Cramer, R.A., Cuomo, C., Currie, C.R., Ene, I.V., Fisher, M.C., Fritz-Laylin, L.K., Gerstein, A.C., et al. "The future of fungi: threats and opportunities." G3: Genes | Genomes | Genetics 12,11, jkac224+ (2022). [DOI: 10.1093/g3journal/jkac224] |
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| 2022 | Cates, A.C., Jilling, A., Tfaily, M.M. & Jackson, R.D. "Temperature and moisture alter organic matter composition across soil fractions." Geoderma 409, 115628+ (2022). [DOI: 10.1016/j.geoderma.2021.115628] |
Sustainability |
| 2022 | Chipkar, S., Smith, K., Whelan, E.M., Debrauske, D.J., Jen, A., Overmyer, K.A., Senyk, A., Hooker-Moericke, L., Gallmeyer, M., Coon, J.J., et al. "Water-soluble saponins accumulate in drought-stressed switchgrass and may inhibit yeast growth during bioethanol production." Biotechnology for Biofuels and Bioproducts 15, 116+ (2022). [DOI: 10.1186/s13068-022-02213-y] |
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| 2022 | De Meester, B., Oyarce, P., Vanholme, R., Van Acker, R., Tsuji, Y., Vangeel, T., Van den Bosch, S., Van Doorsselaere, J., Sels, B., Ralph, J., et al. "Engineering curcumin biosynthesis in poplar affects lignification and biomass yield." Frontiers in Plant Science 13, 943349+ (2022). [DOI: 10.3389/fpls.2022.943349] |
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| 2022 | de Vries, L., MacKay, H.A., Smith, R.A., Mottiar, Y., Karlen, S.D., Unda, F., Muirragui, E., Bingman, C., Meulen, K.V., Beebe, E.T., et al. "pHBMT1, a BAHD-family monolignol acyltransferase, mediates lignin acylation in poplar." Plant Physiology 188, 1014–1027+ (2022). [DOI: 10.1093/plphys/kiab546] |
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| 2022 | del Río, J.C., Rencoret, J., Gutiérrez, A., Kim, H. & Ralph, J. "Unconventional lignin monomers—extension of the lignin paradigm." in Advances in Botanical Research. (ed. Sibout, R.) vols. 104 1–39+ (Elsevier, 2022). [DOI: 10.1016/bs.abr.2022.02.001] |
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| 2022 | Donohue, T.J. "Editorial overview: microbial activities powering society." Current Opinion in Microbiology 67, 102144+ (2022). [DOI: 10.1016/j.mib.2022.102144] |
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| 2022 | Edwards, M.R., Holloway, T., Pierce, B., Blank, L., Broddle, M., Choi, E., Duncan, B.N., Esparza, A., Falchetta, G., Fritz, M., et al. "Satellite data applications for sustainable energy transitions." Frontiers in Sustainability 3, 910924+ (2022). [DOI: 10.3389/frsus.2022.910924] |
