Publications

When it comes to interdisciplinary collaboration, the titles of GLBRC publications speak for themselves. Each new year of operation has seen more publications from multiple labs that span our research themes, accelerating the Center's production of the basic research that generates technology to convert cellulosic biomass to advanced biofuels and bioproducts.

Year	Publication	Keywords
2022	Zhang, Y., Myers, K.S., Place, M., Serate, J., Xie, D., Pohlmann, E., La Reau, A., Landick, R. & Sato, T.K. "Transcriptomic data sets for Zymomonas mobilis 2032 during fermentation of ammonia fiber expansion (AFEX)-pretreated corn stover and switchgrass hydrolysates." Microbiology Resource Announcements 11,9, (2022). [DOI: 10.1128/mra.00564-22] DOI Google Scholar
2022	Zheng, H., Guber, A.K., Kuzyakov, Y., Zhang, W. & Kravchenko, A.N. "Plant species and plant neighbor identity affect associations between plant assimilated C inputs and soil pores." Geoderma 407, 115565+ (2022). [DOI: 10.1016/j.geoderma.2021.115565] DOI Google Scholar
2022	Zhou, Y., Klinger, G.E., Hegg, E.L., Saffron, C.M. & Jackson, J.E. "Skeletal Ni electrode-catalyzed C-O cleavage of diaryl ethers entails direct elimination via benzyne intermediates." Nature Communications 13,1, 2050+ (2022). [DOI: 10.1038/s41467-022-29555-3] DOI Google Scholar	Deconstruction
2022	Gambacorta, F.V., Dietrich, J.J., Baerwald, J.J., Brown, S.J., Su, Y. & Pfleger, B.F. "Combinatorial library design for improving isobutanol production in Saccharomyces cerevisiae." Frontiers in Bioengineering and Biotechnology 10, 1080024+ (2022). [DOI: 10.3389/fbioe.2022.1080024] DOI Google Scholar
2022	Hall, B.W., Bingman, C.A., Fox, B.G., Noguera, D.R. & Donohue, T.J. "A broad specificity β-propeller enzyme from Rhodopseudomonas palustris that hydrolyzes many lactones including γ-valerolactone." Journal of Biological Chemistry 299,1, 102782+ (2022). [DOI: 10.1016/j.jbc.2022.102782] DOI Google Scholar
2022	Lin, C.-Y., Geiselman, G.M., Liu, D., Magurudeniya, H.D., Rodriguez, A., Chen, Y.-C., Pidatala, V., Unda, F., Amer, B., Baidoo, E.E.K., et al. "Evaluation of engineered low-lignin poplar for conversion into advanced bioproducts." Biotechnology for Biofuels and Bioproducts 15,1, 145+ (2022). [DOI: 10.1186/s13068-022-02245-4] DOI Google Scholar
2022	McKinley, B.A., Thakran, M., Zemelis-Durfee, S., Huang, X., Brandizzi, F., Rooney, W.L., Mansfield, S.D. & Mullet, J.E. "Transcriptional regulation of the raffinose family oligosaccharides pathway in Sorghum bicolor reveals potential roles in leaf sucrose transport and stem sucrose accumulation." Frontiers in Plant Science 13, 1062264+ (2022). [DOI: 10.3389/fpls.2022.1062264] DOI Google Scholar
2022	Tilhou, N.W. & Casler, M.D. "Switchgrass sward establishment selection is consistent across multiple environments and fertilization levels." Grassland Research 1,4, 252-261+ (2022). [DOI: 10.1002/glr2.12035] DOI Google Scholar
2021	Abraha, M., Chen, J., Hamilton, S.K., Sciusco, P., Lei, C., Shirkey, G., Yuan, J. & Robertson, P. "Albedo-induced global warming impact of Conservation Reserve Program grasslands converted to annual and perennial bioenergy crops." Environmental Research Letters 16,8, 084059+ (2021). [DOI: 10.1088/1748-9326/ac1815] DOI Google Scholar
2021	Abu-Omar, M.M., Barta, K., Beckham, G.T., Luterbacher, J.S., Ralph, J., Rinaldi, R., Román-Leshkov, Y., Samec, J.S.M., Sels, B.F. & Wang, F. "Guidelines for performing lignin-first biorefining." Energy & Environmental Science 14,1, 262-292+ (2021). [DOI: 10.1039/D0EE02870C] DOI Google Scholar
2021	Alherech, M., Omolabake, S., Holland, C.M., Klinger, G.E., Hegg, E.L. & Stahl, S.S. "From lignin to valuable aromatic chemicals: lignin depolymerization and monomer separation via centrifugal partition chromatography." ACS Central Science 7,11, 1831–1837+ (2021). [DOI: 10.1021/acscentsci.1c00729] DOI Google Scholar
2021	Ando, D., Lu, F., Kim, H., Eugene, A., Tobimatsu, Y., Vanholme, R., Elder, T.J., Boerjan, W. & Ralph, J. "Incorporation of catechyl monomers into lignins: lignification from the non-phenolic end via Diels–Alder cycloaddition?" Green Chemistry 23,22, 8995-9013+ (2021). [DOI: 10.1039/D1GC03022A] DOI Google Scholar
2021	Angelos, E., Ko, D.K., Zemelis-Durfee, S. & Brandizzi, F. "Relevance of the unfolded protein response to spaceflight-induced transcriptional reprogramming in Arabidopsis." Astrobiology 21, 3+ (2021). [DOI: 10.1089/ast.2020.2313] DOI Google Scholar	Feedstocks
2021	Basso, B. "Precision conservation for a changing climate." Nature Food 2, 322-323+ (2021). [DOI: 10.1038/s43016-021-00283-z] DOI Google Scholar	Sustainability
2021	Basso, B., Jones, J.W., Antle, J., Martinez-Feria, R.A. & Verma, B. "Enabling circularity in grain production systems with novel technologies and policy." Agricultural Systems 193, 103244+ (2021). [DOI: 10.1016/j.agsy.2021.103244] DOI Google Scholar	Sustainability
2021	Basso, B., Martinez-Feria, R.A., Rill, L. & Ritchie, J.T. "Contrasting long-term temperature trends reveal minor changes in projected potential evapotranspiration in the US Midwest." Nature Communications 12, 1476+ (2021). [DOI: 10.1038/s41467-021-21763-7] DOI Google Scholar	Sustainability
2021	Basyal, B., Foster, C., Gross, K.L. & Emery, S.M. "Nitrogen fertilizer, arbuscular mycorrhizal fungi, and soil nematodes affect lignin quality and quantity in switchgrass (Panicum virgatum L.)." BioEnergy Research 15, 1033–1041+ (2021). [DOI: 10.1007/s12155-021-10284-2] DOI Google Scholar
2021	Beach, N.K., Myers, K.S., Owen, B.R., Seib, M., Donohue, T.J. & Noguera, D.R. "Exploring the meta-regulon of the CRP/FNR family of global transcriptional regulators in a partial-nitritation anammox microbiome." mSystems 6,5, (2021). [DOI: 10.1128/mSystems.00906-21] DOI Google Scholar
2021	Belanger, M.A., Vizza, C., Robertson, P. & Roley, S.S. "Quantifying and correcting for pre-assay CO2 loss in short-term carbon mineralization assays." SOIL 7, 47-52+ (2021). [DOI: 10.5194/soil-7-47-2021] DOI Google Scholar
2021	Bell-Dereske, L.P. & Evans, S.E. "Contributions of environmental and maternal transmission to the assembly of leaf fungal endophyte communities." Proceedings of the Royal Society B 288,1956, 20210621+ (2021). [DOI: 10.1098/rspb.2021.0621] DOI Google Scholar	Sustainability
2021	Bourbonnais, A., Frey, C., Sun, X., Bristow, L.A., Jayakumas, A., Ostrom, N.E., Casciotti, K.L. & Ward, B.B. "Protocols for assessing transformation rates of nitrous oxide in the water column." Frontiers in Marine Science 8, 611937+ (2021). [DOI: 10.3389/fmars.2021.611937] DOI Google Scholar
2021	Bowsher, A.W., Benucci, G.M.N., Bonito, G. & Shade, A. "Seasonal dynamics of core fungi in the switchgrass phyllosphere, and co-occurrence with leaf bacteria." Phytobiomes Journal 5,1, 60-68+ (2021). [DOI: 10.1094/pbiomes-07-20-0051-r] DOI Google Scholar	Sustainability
2021	Cadez, N., Bellora, N., Ulloa, R., Tome, M., Petkovic, H., Groenewald, M., Hittinger, C.T. & Libkind, D. "Hanseniaspora smithiae sp. nov., a novel apiculate yeast species from Patagonian forests that lacks the typical genomic domestication signatures for fermentative environments." Frontiers in Microbiology 12, 679894+ (2021). [DOI: 10.3389/fmicb.2021.679894] DOI Google Scholar
2021	Cao, Y., Yan, X., Ran, S., Ralph, J., Smith, R.A., Chen, X., Qu, C., Li, J. & Liu, L. "Knockout of the lignin pathway gene BnF5H decreases the S/G lignin compositional ratio and improves S. sclerotiorum resistance in B. napus." Plant, Cell & Environment 45,1, 248-261+ (2021). [DOI: 10.1111/pce.14208] DOI Google Scholar
2021	Cates, A.M., Wills, B.D., Kim, T.N., Landis, D.A., Gratton, C., Read, H.W. & Jackson, R.D. "No evidence of top-down effects by ants on litter decomposition in a temperate grassland." Ecosphere 12,7, (2021). [DOI: 10.1002/ecs2.3638] DOI Google Scholar	Sustainability