Publications

When it comes to interdisciplinary collaboration, the titles of GLBRC publications speak for themselves. Each new year of operation has seen more publications from multiple labs that span our research themes, accelerating the Center's production of the basic research that generates technology to convert cellulosic biomass to advanced biofuels and bioproducts.

Year	Publication	Keywords
2022	Donohue, T.J. "Editorial overview: microbial activities powering society." Current Opinion in Microbiology 67, 102144+ (2022). [DOI: 10.1016/j.mib.2022.102144] DOI Google Scholar
2022	Edwards, M.R., Holloway, T., Pierce, B., Blank, L., Broddle, M., Choi, E., Duncan, B.N., Esparza, A., Falchetta, G., Fritz, M., et al. "Satellite data applications for sustainable energy transitions." Frontiers in Sustainability 3, 910924+ (2022). [DOI: 10.3389/frsus.2022.910924] DOI Google Scholar
2022	Elder, T., del Río, J.C., Ralph, J., Rencoret, J. & Kim, H. "Density functional theory study on the coupling and reactions of diferuloylputrescine as a lignin monomer." Phytochemistry 197, 113122+ (2022). [DOI: 10.1016/j.phytochem.2022.113122] DOI Google Scholar
2022	Emery, S.M., Bell-Dereske, L., Stahlheber, K.A. & Gross, K.L. "Arbuscular mycorrhizal fungal community responses to drought and nitrogen fertilization in switchgrass stands." Applied Soil Ecology 169, 104218+ (2022). [DOI: 10.1016/j.apsoil.2021.104218] DOI Google Scholar	Sustainability
2022	Fan, M., Jensen, J.K., Zemelis-Durfee, S., Kim, S.-J., Chan, J.-Y., Beaudry, C.M., Brandizzi, F. & Wilkerson, C.G. "Disruption of Brachypodium lichenase alters metabolism of mixed-linkage glucan and starch." The Plant Journal 109,4, 927-939+ (2022). [DOI: 10.1111/tpj.15603] DOI Google Scholar
2022	Fang, Z., Jackson, J.E. & Hegg, E.L. "Mild, electroreductive lignin cleavage: optimizing the depolymerization of authentic lignins." ACS Sustainable Chemistry & Engineering 10,23, 7545–7552+ (2022). [DOI: 10.1021/acssuschemeng.2c00820] DOI Google Scholar
2022	Felczak, M.M. & TerAvest, M.A. "Zymomonas mobilis ZM4 utilizes an NADP+-dependent acetaldehyde dehydrogenase to produce acetate." Journal of Bacteriology 204,4, (2022). [DOI: 10.1128/jb.00563-21] DOI Google Scholar
2022	Fortney, N.W., Myers, K.S., Ingle, A.T., Walters, K.A., Scarborough, M.J., Donohue, T.J. & Noguera, D.R. "Metagenomes and metagenome-assembled genomes from microbiomes metabolizing thin stillage from an ethanol biorefinery." Microbiology Resource Announcements 11,8, (2022). [DOI: 10.1128/mra.00290-22] DOI Google Scholar
2022	Gabaldon, T. & Hittinger, C.T. "Genomic insights on fungal hybrids." Frontiers in Fungal Biology 3, 1063609+ (2022). [DOI: 10.3389/ffunb.2022.1063609] DOI Google Scholar
2022	Gambacorta, F.V., Wagner, E.R., Jacobson, T.B., Tremaine, M., Muehlbauer, L.K., McGee, M.A., Baerwald, J.J., Wrobel, R.L., Wolters, J.F., Place, M., et al. "Comparative functional genomics identifies an iron-limited bottleneck in a Saccharomyces cerevisiae strain with a cytosolic-localized isobutanol pathway." Synthetic and Systems Biotechnology 7, 738-749+ (2022). [DOI: 10.1016/j.synbio.2022.02.007] DOI Google Scholar
2022	Geissler, C.H. & Maravelias, C.T. "Analysis of alternative bioenergy with carbon capture strategies: present and future." Energy & Environmental Science 15,7, 2679-2689+ (2022). [DOI: 10.1039/D2EE00625A] DOI Google Scholar
2022	Gilcher, E.B., Chang, H., Huber, G.W. & Dumesic, J.A. "Controlled hydrogenation of a biomass-derived platform chemical formed by aldol-condensation of 5-hydroxymethyl furfural (HMF) and acetone over Ru, Pd, and Cu catalysts." Green Chemistry 24,5, 2146-2159+ (2022). [DOI: 10.1039/D1GC04650K] DOI Google Scholar
2022	Goes, S.L., Nutting, J.E., Hill, N.J., Stahl, S.S. & Rafiee, M. "Exploring electrosynthesis: bulk electrolysis and cyclic voltammetry analysis of the Shono oxidation." Journal of Chemical Education 99,9, 3242-3248+ (2022). [DOI: 10.1021/acs.jchemed.2c00221] DOI Google Scholar	Deconstruction
2022	Guber, A., Blagodatskaya, E. & Kravchenko, A. "Are enzymes transported in soils by water fluxes?" Soil Biology and Biochemistry 168, 108633+ (2022). [DOI: 10.1016/j.soilbio.2022.108633] DOI Google Scholar
2022	Harrison, M.-C., Labella, A.L., Hittinger, C.T. & Rokas, A. "The evolution of the GALactose utilization pathway in budding yeasts." Trends in Genetics 38,1, 97-106+ (2022). [DOI: 10.1016/j.tig.2021.08.013] DOI Google Scholar
2022	Hoengenaert, L., Wouters, M., Kim, H., De Meester, B., Morreel, K., Vandersyppe, S., Pollier, J., Desmet, S., Goeminne, G., Ralph, J., et al. "Overexpression of the scopoletin biosynthetic pathway enhances lignocellulosic biomass processing." Science Advances 8,28, (2022). [DOI: 10.1126/sciadv.abo5738] DOI Google Scholar
2022	Horstmann, N., Myers, K.S., Tran, C.N., Flores, A.R. & Shelburne, S.A. "CovS inactivation reduces CovR promoter binding at diverse virulence factor encoding genes in group A Streptococcus." PLOS Pathogens 18,2, (2022). [DOI: 10.1371/journal.ppat.1010341] DOI Google Scholar
2022	Hu, S., Kamimura, N., Sakamoto, S., Nagano, S., Takata, N., Liu, S., Goeminne, G., Vanholme, R., Uesugi, M., Yamamoto, M., et al. "Rerouting of the lignin biosynthetic pathway by inhibition of cytosolic shikimate recycling in transgenic hybrid aspen." The Plant Journal 110,2, 358-376+ (2022). [DOI: 10.1111/tpj.15674] DOI Google Scholar
2022	Huang, X., Wang, W., Gong, T., Wickell, D., Kuo, L.-Y., Zhang, X., Wen, J., Kim, H., Lu, F., Zhao, H., et al. "The flying spider-monkey tree fern genome provides insights into fern evolution and arborescence." Nature Plants 8,5, 500-512+ (2022). [DOI: 10.1038/s41477-022-01146-6] DOI Google Scholar
2022	Ingle, A.T., Fortney, N.W., Myers, K.S., Walters, K.A., Scarborough, M.J., Donohue, T.J. & Noguera, D.R. "Metagenome-assembled genomes from a microbiome grown in dairy manure hydrolysate." Microbiology Resource Announcements 11,8, (2022). [DOI: 10.1128/mra.00292-22] DOI Google Scholar
2022	Je, L., Huber, G.W., Van Lehn, R.C. & Zavala, V.M. "On the integration of molecular dynamics, data science, and experiments for studying solvent effects on catalysis." Current Opinion in Chemical Engineering 36, 100796+ (2022). [DOI: 10.1016/j.coche.2022.100796] DOI Google Scholar
2022	Khana, D.B., Callaghan, M.M. & Amador-Noguez, D. "Novel computational and experimental approaches for investigating the thermodynamics of metabolic networks." Current Opinion in Microbiology 66, 21-31+ (2022). [DOI: 10.1016/j.mib.2021.11.007] DOI Google Scholar
2022	Khosrozadeh, S., Guber, A., Kravchenko, A., Ghaderi, N. & Blagodatskaya, E. "Soil oxidoreductase zymography: visualizing spatial distributions of peroxidase and phenol oxidase activities at the root-soil interface." Soil Biology and Biochemistry 167, 108610+ (2022). [DOI: 10.1016/j.soilbio.2022.108610] DOI Google Scholar
2022	Kim, K., Gil, J., Ostrom, N.E., Gandhi, H., Oerther, M.S., Kuzyakov, Y., Guber, A.K. & Kravchenko, A.N. "Soil pore architecture and rhizosphere legacy define N2O production in root detritusphere." Soil Biology and Biochemistry 166, 108565+ (2022). [DOI: 10.1016/j.soilbio.2022.108565] DOI Google Scholar
2022	Kim, T.N., Bukhman, Y.V., Jusino, M.A., Scully, E.D., Spiesman, B.J. & Gratton, C. "Using high-throughput amplicon sequencing to determine diet of generalist lady beetles in agricultural landscapes." Biological Control 170, 104920+ (2022). [DOI: 10.1016/j.biocontrol.2022.104920] DOI Google Scholar	Sustainability