Publications

Jones, C., Reddy, A., Jeong, J., Williams, J., Hamilton, S.K., Hussain, M.Z., Bandaru, V. & Izaurralde, R. "Improved hydrological modeling with APEX and EPIC: model description, testing, and assessment of bioenergy producing landscape scenarios." Environmental Modelling and Software 143, 105111+ (2021). [DOI: 10.1016/j.envsoft.2021.105111]

Kasanke, C.P., Zhao, Q., Bell, S., Thompson, A.M. & Hofmockel, K.S. "Can switchgrass increase carbon accrual in marginal soils? The importance of site selection." Global Change Biology – Bioenergy 13,2, 320–335+ (2021). [DOI: 10.1111/gcbb.12777]

Kemmerling, L.R., Griffin, S.R. & Haddad, N.M. "Optimizing pollinator conservation and crop yield among perennial bioenergy crops." Global Change Biology – Bioenergy 13,7, 1030–1042+ (2021). [DOI: 10.1111/gcbb.12826]

Kravchenko, A., Guber, A., Gunina, A., Dippold, M. & Kuzyakov, Y. "Pore-scale view of microbial turnover: combining 14C imaging, µCT, and zymography after adding soluble carbon to soil pores of specific sizes." European Journal of Soil Science 72,2, 593–607+ (2021). [DOI: 10.1111/ejss.13001]

Kuhl, A.S., Kendall, A.D., van Dam, R.L., Hamilton, S.K. & Hyndman, D.W. "Root water uptake of biofuel crops revealed by coupled electrical resistivity and soil water content measurements." Valdose Zone Journal 20,4, e20124+ (2021). [DOI: 10.1002/vzj2.20124]

Lark, T.J., Schelly, I.H. & Gibbs, H.K. "Accuracy, bias, and improvements in mapping crops and cropland across the United States using the USDA cropland data layer." Remote Sensing 13,5, 968+ (2021). [DOI: 10.3390/rs13050968]

Lei, C., Abraha, M., Chen, J. & Su, Y.-J. "Long-term variability of root production in bioenergy crops from ingrowth core measurements." Journal of Plant Ecology 14,5, 757–770+ (2021). [DOI: 10.1093/jpe/rtab018]

Li, B.-B., Roley, S.S., Duncan, D.S., Guo, J., Quensen, J.F., Yu, H.-Q. & Tiedje, J.M. "Long-term excess nitrogen fertilizer increases sensitivity of soil microbial community to seasonal change revealed by ecological network and metagenome analyses." Soil Biology and Biochemistry 160, 108349+ (2021). [DOI: 10.1016/j.soilbio.2021.108349]

Liang, D. & Robertson, P. "Nitrification is a minor source of nitrous oxide (N2O) in agricultural landscapes and declines with increasing management intensity." Global Change Biology 27,21, 5599–5613+ (2021). [DOI: 10.1111/gcb.15833]

Liber, J.A., Bonito, G. & Benucci, G.M.N. "CONSTAX2: improved taxonomic classification of environmental DNA markers." Bioinformatics 37,21, 3941–3943+ (2021). [DOI: 10.1093/bioinformatics/btab347]

Maestrini, B. & Basso, B. "Subfield crop yields and temporal stability in thousands of US Midwest fields." Precision Agriculture 22,6, 1749–1767+ (2021). [DOI: 10.1007/s11119-021-09810-1]

O’Neill, E.G. & Maravelias, C.T. "Towards integrated landscape design and biofuel supply chain optimization." Current Opinion in Chemical Engineering 31, 100666+ (2021). [DOI: 10.1016/j.coche.2020.100666]

Reed, D.E., Poe, J., Abraha, M., Dahlin, K.M. & Chen, J. "Modeled surface-atmosphere fluxes from paired sites in the Upper Great Lakes Region using neural networks." JGR Biogeosciences 126,8, e2021JG006363+ (2021). [DOI: 10.1029/2021JG006363]

Ryu, J. & Maravelias, C.T. "A generalized distillation network synthesis model." Chemical Engineering Science 244, 116766+ (2021). [DOI: 10.1016/j.ces.2021.116766]

Saha, D., Basso, B. & Robertson, P. "Machine learning improves predictions of agricultural nitrous oxide (N2O) emissions from intensively managed cropping systems." Environmental Research Letters 16,2, 024004+ (2021). [DOI: 10.1088/1748-9326/abd2f3]

Schulte, L.A., Dale, B.E., Bozzetto, S., Liebman, M., Souza, G.M., Haddad, N., Richard, T.L., Brown, R.C., Hilbert, J.A. & Arbuckle, G. "Meeting global challenges with regenerative agriculture producing food and energy." Nature Sustainability 5, 384–388+ (2021). [DOI: 10.1038/s41893-021-00827-y]

Shirkey, G., Belongeay, M., Wu, S., Ma, X., Tavakol-Davani, H., Anctil, A., Marquart-Pyatt, S., Stewart, R.A., Sinha, P., Corkish, R., et al. "An environmental and societal analysis of the US electrical energy industry based on the water–energy nexus." Energies 14,9, 2633+ (2021). [DOI: 10.3390/en14092633]

Smercina, D.N., Bowsher, A.W., Evans, S.E., Friesen, M.L., Eder, E.K., Hoyt, D.W. & Tiemann, L.K. "Switchgrass rhizosphere metabolite chemistry driven by nitrogen availability." Phytobiomes Journal 5,1, 88–96+ (2021). [DOI: 10.1094/PBIOMES-09-19-0055-FI]

Smercina, D.N., Evans, S.E., Friesen, M.L. & Tiemann, L.K. "Temporal dynamics of free-living nitrogen fixation in the switchgrass rhizosphere." Global Change Biology – Bioenergy 13,11, 1814–1830+ (2021). [DOI: 10.1111/gcbb.12893]

Swinton, S.M., Dulys, F. & Klammer, S.S. "Why biomass residue is not as plentiful as it looks: case study on economic supply of logging residues." Applied Economic Perspectives and Policy 43,3, 1003–1025+ (2021). [DOI: 10.1002/aepp.13067]

Ulbrich, T.C., Friesen, M., Roley, S.S., Tiemann, L.K. & Evans, S.E. "Intraspecific variability in root traits and edaphic conditions influence soil microbiomes across 12 switchgrass cultivars." Phytobiomes Journal 5,1, 108–120+ (2021). [DOI: 10.1094/pbiomes-12-19-0069-fi]

Wang, P., Meng, F., Moore, B.M. & Shiu, S.-H. "Impact of short-read sequencing on the misassembly of a plant genome." BMC Genomics 22,1, 99+ (2021). [DOI: 10.1186/s12864-021-07397-5]

Xie, Y., Gibbs, H.K. & Lark, T.J. "Landsat-based Irrigation Dataset (LANID): 30 m resolution maps of irrigation distribution, frequency, and change for the US, 1997–2017." Earth System Science Data 13,12, 5689–5710+ (2021). [DOI: 10.5194/essd-13-5689-2021]

Xie, Y. & Lark, T.J. "Mapping annual irrigation from Landsat imagery and environmental variables across the conterminous United States." Remote Sensing of Environment 260, 112445+ (2021). [DOI: 10.1016/j.rse.2021.112445]

Zhang, B., Penton, R., Yu, Z., Xue, C., Chen, Q., Chen, Z., Yan, C., Zhang, Q., Zhao, M., Quensen, J.F., et al. "A new primer set for Clade I nosZ that recovers genes from a broader range of taxa." Biology and Fertility of Soils 57,4, 523–531+ (2021). [DOI: 10.1007/s00374-021-01544-6]