Publications

When it comes to interdisciplinary collaboration, the titles of GLBRC publications speak for themselves. Each new year of operation has seen more publications from multiple labs that span our research themes, accelerating the Center's production of the basic research that generates technology to convert cellulosic biomass to advanced biofuels and bioproducts.

Year	Publication	Keywords
2011	Xu, C., Liang, C., Wullschleger, S., Wilson, C. & McDowell, N. "Importance of feedback loops between soil inorganic nitrogen and microbial communities in the heterotrophic soil respiration response to global warming." Nature Reviews Microbiology 9,3, 222-222+ (2011). [DOI: 10.1038/nrmicro2439-c1] DOI Google Scholar	Sustainability
2011	Yelle, D.J., Ralph, J. & Frihart, C.R. "Delineating pMDI-model reactions with loblolly pine via solution-state NMR spectroscopy. Part 1. Catalyzed reactions with wood models and wood polymers." Holzforschung: International Journal of the Biology, Chemistry, Physics, and Technology of Wood 65,2, 131-143+ (2011). [DOI: 10.1515/HF.2011.028] DOI Google Scholar
2011	Yelle, D.J., Ralph, J. & Frihart, C.R. "Delineating pMDI-model reactions with loblolly pine via solution-state NMR spectroscopy. Part 2. Non-catalyzed reactions with the wood cell wall." Holzforschung: International Journal of the Biology, Chemistry, Physics, and Technology of Wood 65,2, 145-154+ (2011). [DOI: 10.1515/HF.2011.029] DOI Google Scholar
2011	Yelle, D.J., Wei, D., Ralph, J. & Hammel, K.E. "Multidimensional NMR analysis reveals truncated lignin structures in wood decayed by the brown rot basidiomycete Postia placenta." Environmental Microbiology 13,4, 1091-1100+ (2011). [DOI: 10.1111/j.1462-2920.2010.02417.x] DOI Google Scholar	Feedstocks
2011	Youngquist, T., Lennen, R.M., Ranatunga, D.R., Bothfeld, W.H., Marner, W.D. & Pfleger, B.F. "Kinetic modeling of free fatty acid production in Escherichia coli based on continuous cultivation of a plasmid free strain." Biotechnology and Bioengineering 109,6, 1518-27+ (2011). [DOI: 10.1002/bit.24420] DOI Google Scholar	Conversion
2011	Zalapa, J.E., Price, D.L., Kaeppler, S.M., Tobias, C.M., Okada, M. & Casler, M.D. "Hierarchical classification of switchgrass genotypes using SSR and chloroplast sequences: ecotypes, ploidies, gene pools, and cultivars." Theoretical and Applied Genetics 122,4, 805-17+ (2011). [DOI: 10.1007/s00122-010-1488-1] DOI Google Scholar	Feedstocks
2011	Zenone, T., Chen, J., Deal, M.W., Wilske, B., Jasrotia, P., Xu, J., Bhardwaj, A.K., Hamilton, S.K. & Robertson, P. "CO2 fluxes of transitional bioenergy crops: effect of land conversion during the first year of cultivation." Global Change Biology – Bioenergy 3,5, 401-412+ (2011). [DOI: 10.1111/j.1757-1707.2011.01098.x] DOI Google Scholar	Sustainability
2011	Zhang, X., Izaurralde, C., Arnold, J.G., Sammons, N.B., Manowitz, D.H., Thomson, A.M. & Williams, J.R. "Comment on “Modeling miscanthus in the Soil and Water Assessment Tool (SWAT) to simulate its water quality effects as a bioenergy crop”." Environmental Science & Technology 45,14, 6211-6212+ (2011). [DOI: 10.1021/es201463x] DOI Google Scholar	Sustainability
2011	Zhang, X., Liang, F., Yu, B. & Zong, Z. "Explicitly integrating parameter, input and structure uncertainties into Bayesian Neural Networks for probabilistic hydrologic forecasting." Journal of Hydrology 409,3-4, 696-709+ (2011). [DOI: 10.1016/j.jhydrol.2011.09.002] DOI Google Scholar	Sustainability
2011	Zhang, Y., Zalapa, J., Jakubowski, A., Price, D., Acharya, A., Wei, Y., Brummer, E., Kaeppler, S. & Casler, M. "Post-glacial evolution of Panicum virgatum: centers of diversity and gene pools revealed by SSR markers and cpDNA sequences." Genetica 139,7, 933-948+ (2011). [DOI: 10.1007/s10709-011-9597-6] DOI Google Scholar	Feedstocks
2011	Zhang, Y., Zalapa, J., Jakubowski, A.R., Price, D.L., Acharya, A., Wei, Y., Brummer, E., Kaeppler, S.M. & Casler, M.D. "Natural hybrids and gene flow between upland and lowland switchgrass." Crop Science 51, 2626-2641+ (2011). [DOI: 10.2135/cropsci2011.02.0104] DOI Google Scholar	Feedstocks
2011	Zhu, X. & Mitchell, J.C. "KFC2: a knowledge-based hot spot prediction method based on interface solvation, atomic density, and plasticity features." Proteins 79,9, 2671-83+ (2011). [DOI: 10.1002/prot.23094] DOI Google Scholar
2011	Zhu, Y. & Ralph, J. "Stereoselective synthesis of 1-O-β-feruloyl and 1-O-β-sinapoyl glucopyranoses." Tetrahedron Letters 52,29, 3729-3731+ (2011). [DOI: 10.1016/j.tetlet.2011.05.038] DOI Google Scholar	Feedstocks
2010	Alonso, A.P., Dale, V.L. & Shachar-Hill, Y. "Understanding fatty acid synthesis in developing maize embryos using metabolic flux analysis." Metabolic Engineering 12,5, 488-497+ (2010). [DOI: 10.1016/j.ymben.2010.04.002] DOI Google Scholar	Feedstocks
2010	Alonso, A.P., Piasecki, R.J., Wang, Y., Laclair, R.W. & Shachar-Hill, Y. "Quantifying the labeling and the levels of plant cell wall precursors using ion chromatography tandem mass spectrometry." Plant Physiology 153,3, 915-924+ (2010). [DOI: 10.1104/pp.110.155713] DOI Google Scholar	Feedstocks
2010	Bals, B., Rogers, C., Jin, M., Balan, V. & Dale, B.E. "Evaluation of ammonia fiber expansion (AFEX) pretreatment for enzymatic hydrolysis of switchgrass harvested in different seasons and locations." Biotechnology for Biofuels 3,1, 11+ (2010). [DOI: 10.1186/1754-6834-3-1] DOI Google Scholar	Deconstruction
2010	Banerjee, G., Car, S., Scott-Craig, J., Borrusch, M. & Walton, J. "Rapid optimization of enzyme mixtures for deconstruction of diverse pretreatment/biomass feedstock combinations." Biotechnology for Biofuels 3, 22+ (2010). [DOI: 10.1186/1754-6834-3-22] DOI Google Scholar	Deconstruction
2010	Banerjee, G., Car, S., Scott-Craig, J.S., Borrusch, M.S., Aslam, N. & Walton, J.D. "Synthetic enzyme mixtures for biomass deconstruction: production and optimization of a core set." Biotechnology and Bioengineering 106, 707-720+ (2010). [DOI: 10.1002/bit.22741] DOI Google Scholar	Deconstruction
2010	Banerjee, G., Car, S., Scott-Craig, J.S., Borrusch, M.S., Bongers, M. & Walton, J.D. "Synthetic multi-component enzyme mixtures for deconstruction of lignocellulosic biomass." Bioresource Technology 101,23, 9097-9105+ (2010). [DOI: 10.1016/j.biortech.2010.07.028] DOI Google Scholar	Deconstruction
2010	Banerjee, G., Scott-Craig, J.S. & Walton, J.D. "Improving enzymes for biomass conversion: a basic research perspective." BioEnergy Research 3, 82-92+ (2010). [DOI: 10.1007/s12155-009-9067-5] DOI Google Scholar	Deconstruction
2010	Barua, D., Kim, J. & Reed, J.L. "An automated phenotype-driven approach (GeneForce) for refining metabolic and regulatory models." PLOS Computational Biology 6,10, (2010). [DOI: 10.1371/journal.pcbi.1000970] DOI Google Scholar	Conversion
2010	Binder, J.B., Blank, J.J., Cefali, A.V. & Raines, R.T. "Synthesis of furfural from xylose and xylan." ChemSusChem 3,11, 1268-1272+ (2010). [DOI: 10.1002/cssc.201000181] DOI Google Scholar	Conversion
2010	Binder, J.B., Cefali, A.V., Blank, J.J. & Raines, R.T. "Mechanistic insights on the conversion of sugars into 5-hydroxymethylfurfural." Energy and Environmental Science 3,6, 765-771+ (2010). [DOI: 10.1039/b923961h] DOI Google Scholar	Conversion
2010	Binder, J.B. & Raines, R.T. "Fermentable sugars by chemical hydrolysis of biomass." Proceedings of the National Academy of Sciences of the United States of America 107, 4516-21+ (2010). [DOI: 10.1073/pnas.0912073107] DOI Google Scholar	Conversion
2010	Bond, J.Q., Alonso, D.M., Wang, D., West, R.M. & Dumesic, J.A. "Integrated catalytic conversion of γ-valerolactone to liquid alkenes for transportation fuels." Science 327,5969, 1110-1114+ (2010). [DOI: 10.1126/science.1184362] DOI Google Scholar	Conversion