Publications

When it comes to interdisciplinary collaboration, the titles of GLBRC publications speak for themselves. Each new year of operation has seen more publications from multiple labs that span our research themes, accelerating the Center's production of the basic research that generates technology to convert cellulosic biomass to advanced biofuels and bioproducts.

Year	Publication	Keywords
2022	da Costa, P.B., Benucci, G.M.N., Chou, M.-Y., Van Wyk, J., Chretien, M. & Bonito, G. "Soil origin and plant genotype modulate switchgrass aboveground productivity and root microbiome assembly." mBio 13,2, (2022). [DOI: 10.1128/mbio.00079-22] DOI Google Scholar
2022	Bibik, J.D., Weraduwage, S.M., Banerjee, A., Robertson, K.’shawn, Espinoza-Corral, R., Sharkey, T.D., Lundquist, P.K. & Hamberger, B.R. "Pathway engineering, re-targeting, and synthetic scaffolding improve the production of squalene in plants." ACS Synthetic Biology 11,6, 2121-2133+ (2022). [DOI: 10.1021/acssynbio.2c00051] DOI Google Scholar
2022	Bloom, E.H., Graham, K.K., Haan, N.L., Heck, A.R., Gut, L.J., Landis, D.A., Milbrath, M., Quinlan, G.M., Wilson, J.K., Zhang, Y., et al. "Responding to the US national pollinator plan: a case study in Michigan." Frontiers in Ecology and the Environment 20,2, 84-92+ (2022). [DOI: 10.1002/fee.2430] DOI Google Scholar
2022	Bouché, F., Woods, D.P., Linden, J., Li, W., Mayer, K.S., Amasino, R.M. & Périlleux, C. "EARLY FLOWERING 3 and photoperiod sensing in Brachypodium distachyon." Frontiers in Plant Science 12, 769194+ (2022). [DOI: 10.3389/fpls.2021.769194] DOI Google Scholar	Feedstocks
2022	Buessecker, S., Sarno, A.F., Reynolds, M.C., Chavan, R., Park, J., Ortiz, M.F., Pérez-Castillo, A.G., Pisco, G.P., Urquiza-Muñoz, J.D., Reis, L.P., et al. "Coupled abiotic-biotic cycling of nitrous oxide in tropical peatlands." Nature Ecology & Evolution 6, 1881-1890+ (2022). [DOI: 10.1038/s41559-022-01892-y] DOI Google Scholar
2022	Case, N.T., Berman, J., Blehert, D.S., Cramer, R.A., Cuomo, C., Currie, C.R., Ene, I.V., Fisher, M.C., Fritz-Laylin, L.K., Gerstein, A.C., et al. "The future of fungi: threats and opportunities." G3: Genes \| Genomes \| Genetics 12,11, (2022). [DOI: 10.1093/g3journal/jkac224] DOI Google Scholar
2022	Cates, A.C., Jilling, A., Tfaily, M.M. & Jackson, R.D. "Temperature and moisture alter organic matter composition across soil fractions." Geoderma 409, 115628+ (2022). [DOI: 10.1016/j.geoderma.2021.115628] DOI Google Scholar	Sustainability
2022	Chipkar, S., Smith, K., Whelan, E.M., Debrauske, D.J., Jen, A., Overmyer, K.A., Senyk, A., Hooker-Moericke, L., Gallmeyer, M., Coon, J.J., et al. "Water-soluble saponins accumulate in drought-stressed switchgrass and may inhibit yeast growth during bioethanol production." Biotechnology for Biofuels and Bioproducts 15, 116+ (2022). [DOI: 10.1186/s13068-022-02213-y] DOI Google Scholar
2022	De Meester, B., Oyarce, P., Vanholme, R., Van Acker, R., Tsuji, Y., Vangeel, T., Van den Bosch, S., Van Doorsselaere, J., Sels, B., Ralph, J., et al. "Engineering curcumin biosynthesis in poplar affects lignification and biomass yield." Frontiers in Plant Science 13, 943349+ (2022). [DOI: 10.3389/fpls.2022.943349] DOI Google Scholar
2022	de Vries, L., MacKay, H.A., Smith, R.A., Mottiar, Y., Karlen, S.D., Unda, F., Muirragui, E., Bingman, C., Meulen, K.V., Beebe, E.T., et al. "pHBMT1, a BAHD-family monolignol acyltransferase, mediates lignin acylation in poplar." Plant Physiology 188, 1014-1027+ (2022). [DOI: 10.1093/plphys/kiab546] DOI Google Scholar
2022	del Río, J.C., Rencoret, J., Gutiérrez, A., Kim, H. & Ralph, J. "Unconventional lignin monomers—extension of the lignin paradigm." in Advances in Botanical Research. vol. 104 1-39+ (Elsevier, 2022). [DOI: 10.1016/bs.abr.2022.02.001] DOI Google Scholar
2022	Donohue, T.J. "Editorial overview: microbial activities powering society." Current Opinion in Microbiology 67, 102144+ (2022). [DOI: 10.1016/j.mib.2022.102144] DOI Google Scholar
2022	Edwards, M.R., Holloway, T., Pierce, B., Blank, L., Broddle, M., Choi, E., Duncan, B.N., Esparza, A., Falchetta, G., Fritz, M., et al. "Satellite data applications for sustainable energy transitions." Frontiers in Sustainability 3, 910924+ (2022). [DOI: 10.3389/frsus.2022.910924] DOI Google Scholar
2022	Elder, T., del Río, J.C., Ralph, J., Rencoret, J. & Kim, H. "Density functional theory study on the coupling and reactions of diferuloylputrescine as a lignin monomer." Phytochemistry 197, 113122+ (2022). [DOI: 10.1016/j.phytochem.2022.113122] DOI Google Scholar
2022	Emery, S.M., Bell-Dereske, L., Stahlheber, K.A. & Gross, K.L. "Arbuscular mycorrhizal fungal community responses to drought and nitrogen fertilization in switchgrass stands." Applied Soil Ecology 169, 104218+ (2022). [DOI: 10.1016/j.apsoil.2021.104218] DOI Google Scholar	Sustainability
2022	Fan, M., Jensen, J.K., Zemelis-Durfee, S., Kim, S.-J., Chan, J.-Y., Beaudry, C.M., Brandizzi, F. & Wilkerson, C.G. "Disruption of Brachypodium lichenase alters metabolism of mixed-linkage glucan and starch." The Plant Journal 109,4, 927-939+ (2022). [DOI: 10.1111/tpj.15603] DOI Google Scholar
2022	Fang, Z., Jackson, J.E. & Hegg, E.L. "Mild, electroreductive lignin cleavage: optimizing the depolymerization of authentic lignins." ACS Sustainable Chemistry & Engineering 10,23, 7545–7552+ (2022). [DOI: 10.1021/acssuschemeng.2c00820] DOI Google Scholar
2022	Felczak, M.M. & TerAvest, M.A. "Zymomonas mobilis ZM4 utilizes an NADP+-dependent acetaldehyde dehydrogenase to produce acetate." Journal of Bacteriology 204,4, (2022). [DOI: 10.1128/jb.00563-21] DOI Google Scholar
2022	Fortney, N.W., Myers, K.S., Ingle, A.T., Walters, K.A., Scarborough, M.J., Donohue, T.J. & Noguera, D.R. "Metagenomes and metagenome-assembled genomes from microbiomes metabolizing thin stillage from an ethanol biorefinery." Microbiology Resource Announcements 11,8, (2022). [DOI: 10.1128/mra.00290-22] DOI Google Scholar
2022	Gabaldon, T. & Hittinger, C.T. "Genomic insights on fungal hybrids." Frontiers in Fungal Biology 3, 1063609+ (2022). [DOI: 10.3389/ffunb.2022.1063609] DOI Google Scholar
2022	Gambacorta, F.V., Wagner, E.R., Jacobson, T.B., Tremaine, M., Muehlbauer, L.K., McGee, M.A., Baerwald, J.J., Wrobel, R.L., Wolters, J.F., Place, M., et al. "Comparative functional genomics identifies an iron-limited bottleneck in a Saccharomyces cerevisiae strain with a cytosolic-localized isobutanol pathway." Synthetic and Systems Biotechnology 7, 738-749+ (2022). [DOI: 10.1016/j.synbio.2022.02.007] DOI Google Scholar
2022	Geissler, C.H. & Maravelias, C.T. "Analysis of alternative bioenergy with carbon capture strategies: present and future." Energy & Environmental Science 15,7, 2679-2689+ (2022). [DOI: 10.1039/D2EE00625A] DOI Google Scholar
2022	Gilcher, E.B., Chang, H., Huber, G.W. & Dumesic, J.A. "Controlled hydrogenation of a biomass-derived platform chemical formed by aldol-condensation of 5-hydroxymethyl furfural (HMF) and acetone over Ru, Pd, and Cu catalysts." Green Chemistry 24,5, 2146-2159+ (2022). [DOI: 10.1039/D1GC04650K] DOI Google Scholar
2022	Goes, S.L., Nutting, J.E., Hill, N.J., Stahl, S.S. & Rafiee, M. "Exploring electrosynthesis: bulk electrolysis and cyclic voltammetry analysis of the Shono oxidation." Journal of Chemical Education 99,9, 3242-3248+ (2022). [DOI: 10.1021/acs.jchemed.2c00221] DOI Google Scholar	Deconstruction
2022	Guber, A., Blagodatskaya, E. & Kravchenko, A. "Are enzymes transported in soils by water fluxes?" Soil Biology and Biochemistry 168, 108633+ (2022). [DOI: 10.1016/j.soilbio.2022.108633] DOI Google Scholar