Publications

When it comes to interdisciplinary collaboration, the titles of GLBRC publications speak for themselves. Each new year of operation has seen more publications from multiple labs that span our research themes, accelerating the Center's production of the basic research that generates technology to convert cellulosic biomass to advanced biofuels and bioproducts.
Year Publication Keywords
2021
Noble, J.A., Seddon, A., Uygun, S., Bright, A., Smith, S.E., Shiu, S.-H. & Palanivelu, R. "The SEEL motif and members of the MYB-related REVEILLE transcription factor family are important for the expression of LORELEI in the synergid cells of the Arabidopsis female gametophyte." Plant Reproduction 35,1, 61-76+ (2021). [DOI: 10.1007/s00497-021-00432-1]
Sustainability
2021
Ntana, F., Bhat, W.W., Johnson, S.R., Jorgensen, H.J.L., Collinge, D.B., Jensen, B. & Hamberger, B. "A sesquiterpene synthase from the endophytic fungus Serendipita indica catalyzes formation of viridiflorol." Biomolecules 11,6, 898+ (2021). [DOI: 10.3390/biom11060898]
2021
O'Brien, C.E., Oliveira-Pacheco, J., Cinneide, E.O., Haase, M.A.B., Hittinger, C.T., Rogers, T.R., Zaragoza, O., Bond, U. & Butler, G. "Population genomics of the pathogenic yeast Candida tropicalis identifies hybrid isolates in environmental samples." PLOS Pathogens 17,3, (2021). [DOI: 10.1371/journal.ppat.1009138]
2021
O’Neill, E.G. & Maravelias, C.T. "Towards integrated landscape design and biofuel supply chain optimization." Current Opinion in Chemical Engineering 31, 100666+ (2021). [DOI: 10.1016/j.coche.2020.100666]
Sustainability
2021
Oates, N.C., Abood, A., Schirmacher, A.M., Alessi, A.M., Bird, S.M., Bennett, J.P., Leadbeater, D.R., Li, Y., Dowle, A.A., Liu, S., et al. "A multi-omics approach to lignocellulolytic enzyme discovery reveals a new ligninase activity from Parascedosporium putredinis NO1." Proceedings of the National Academy of Sciences of the United States of America 118,18, (2021). [DOI: 10.1073/pnas.2008888118]
2021
Oliver, J., Fan, M., McKinley, B., Zemelis-Durfee, S., Brandizzi, F., Wilkerson, C. & Mullet, J.E. "The AGCVIII kinase Dw2 modulates cell proliferation, endomembrane trafficking, and MLG/xylan cell wall localization in elongating stem internodes of Sorghum bicolor." The Plant Journal 105,4, 1053-1071+ (2021). [DOI: 10.1111/tpj.15086]
2021
Ostrom, P.H., DeCamp, S., Gandhi, H., Haslun, J. & Ostrom, N.E. "The influence of tillage and fertilizer on the flux and source of nitrous oxide with reference to atmospheric variation using laser spectroscopy." Biogeochemistry 152, 143-159+ (2021). [DOI: 10.1007/s10533-020-00742-y]
2021
Perez, J.M., Kontur, W.S., Gehl, C., Gille, D.M., Ma, Y., Niles, A.V., Umana, G., Donohue, T.J. & Noguera, D.R. "Redundancy in aromatic O-demethylation and ring opening reactions in Novosphingobium aromaticivorans and their impact in the metabolism of plant derived phenolics." Applied and Environmental Microbiology 87,8, (2021). [DOI: 10.1128/AEM.02794-20]
2021
Reed, D.E., Poe, J., Abraha, M., Dahlin, K.M. & Chen, J. "Modeled surface-atmosphere fluxes from paired sites in the Upper Great Lakes Region using neural networks." JGR Biogeosciences 126,8, (2021). [DOI: 10.1029/2021JG006363]
Sustainability
2021
Robinson, D.E., Place, M., Hose, J., Jochem, A. & Gasch, A.P. "Natural variation in the consequences of gene overexpression and its implications for evolutionary trajectories." eLife 10, (2021). [DOI: 10.7554/eLife.70564]
2021
Roley, S.S., Ulbrich, T.C. & Robertson, P. "Nitrogen fixation and resorption efficiency differences among twelve upland and lowland switchgrass cultivars." Phytobiomes Journal 5,1, 97-107+ (2021). [DOI: 10.1094/PBIOMES-11-19-0064-FI]
2021
Roney, H.E. & Walker, B.J. "Photon to plate: a holistic view of photosynthetic and anthropogenic energy fluxes." Food and Energy Security DOI: 10.1002/fes3.348, (2021). [DOI: 10.1002/fes3.348]
2021
Ryu, J. & Maravelias, C.T. "A generalized distillation network synthesis model." Chemical Engineering Science 244, 116766+ (2021). [DOI: 10.1016/j.ces.2021.116766]
Deconstruction, Sustainability
2021
Saha, D., Basso, B. & Robertson, P. "Machine learning improves predictions of agricultural nitrous oxide (N2O) emissions from intensively managed cropping systems." Environmental Research Letters 16,2, 024004+ (2021). [DOI: 10.1088/1748-9326/abd2f3]
Sustainability
2021
Saha, P., Lin, F., Thibivilliers, S., Xiong, Y., Pan, C. & Bartley, L.E. "Phenylpropanoid biosynthesis gene expression precedes lignin accumulation during shoot cevelopment in lowland and upland switchgrass genotypes." Frontiers in Plant Science 12, 640930+ (2021). [DOI: 10.3389/fpls.2021.640930]
2021
Schulte, L.A., Dale, B.E., Bozzetto, S., Liebman, M., Souza, G.M., Haddad, N., Richard, T.L., Brown, R.C., Hilbert, J.A. & Arbuckle, G. "Meeting global challenges with regenerative agriculture producing food and energy." Nature Sustainability DOI: 10.1038/s41893-021-00827-y, (2021). [DOI: 10.1038/s41893-021-00827-y]
Sustainability
2021
Shirkey, G., Belongeay, M., Wu, S., Ma, X., Tavakol-Davani, H., Anctil, A., Marquart-Pyatt, S., Stewart, R.A., Sinha, P., Corkish, R., et al. "An environmental and societal analysis of the US electrical energy industry based on the water–energy nexus." Energies 14,9, 2633+ (2021). [DOI: 10.3390/en14092633]
Sustainability
2021
Smercina, D.N., Bowsher, A.W., Evans, S.E., Friesen, M.L., Eder, E.K., Hoyt, D.W. & Tiemann, L.K. "Switchgrass rhizosphere metabolite chemistry driven by nitrogen availability." Phytobiomes Journal 5,1, 88-96+ (2021). [DOI: 10.1094/PBIOMES-09-19-0055-FI]
Sustainability
2021
Smercina, D.N., Evans, S.E., Friesen, M.L. & Tiemann, L.K. "Temporal dynamics of free-living nitrogen fixation in the switchgrass rhizosphere." Global Change Biology – Bioenergy 13,11, 1814-1830+ (2021). [DOI: 10.1111/gcbb.12893]
Sustainability
2021
Smith, R.A., Cass, C.L., Petrik, D.L., Padmakshan, D., Ralph, J., Sedbrook, J.C. & Karlen, S.D. "Stacking AsFMT overexpression with BdPMT loss of function enhances monolignol ferulate production in Brachypodium distachyon." Plant Biotechnology Journal 19,9, 1878-1886+ (2021). [DOI: 10.1111/pbi.13606]
Feedstocks
2021
Spawn-Lee, S.A., Lark, T.J., Gibbs, H.K., Houghton, R.A., Kucharik, C.J., Malins, C., Pelton, R.E.O. & Robertson, P. "Comment on ‘Carbon Intensity of corn ethanol in the United States: state of the science’." Environmental Research Letters 16,11, 118001+ (2021). [DOI: 10.1088/1748-9326/ac2e35]
2021
Speers, A.M. & Reguera, G. "Competitive advantage of oxygen-tolerant bioanodes of Geobacter sulfurreducens in bioelectrochemical systems." Biofilm 3, 100052+ (2021). [DOI: 10.1016/j.bioflm.2021.100052]
Conversion
2021
Swinton, S.M., Dulys, F. & Klammer, S.S.H. "Why biomass residue is not as plentiful as it looks: case study on economic supply of logging residues." Applied Economic Perspectives and Policy 43,3, 1003-1025+ (2021). [DOI: 10.1002/aepp.13067]
Sustainability
2021
Takahashi, D., Willick, I.R., Kasuga, J. & Livingston, D.P. "Responses of the plant cell wall to sub-zero temperatures: a brief update." Plant and Cell Physiology 62,12, 1858-1866+ (2021). [DOI: 10.1093/pcp/pcab103]
2021
Tetreault, H.M., Gries, T., Liu, S., Toy, J., Xin, Z., Vermerris, W., Ralph, J., Funnell-Harris, D.L. & Sattler, S.E. "The sorghum (Sorghum bicolor) brown midrib 30 gene encodes a chalcone isomerase required for cell wall lignification." Frontiers in Plant Science 12, 732307+ (2021). [DOI: 10.3389/fpls.2021.732307]