Publications

When it comes to interdisciplinary collaboration, the titles of GLBRC publications speak for themselves. Each new year of operation has seen more publications from multiple labs that span our research themes, accelerating the Center's production of the basic research that generates technology to convert cellulosic biomass to advanced biofuels and bioproducts.

Year	Publication	Keywords
2012	Eudes, A., George, A., Mukerjee, P., Kim, J.S., Pollet, B., Benke, P.I., Yang, F., Mitra, P., Sun, L., Cetinkol, O.P., et al. "Biosynthesis and incorporation of side-chain-truncated lignin monomers to reduce lignin polymerization and enhance saccharification." Plant Biotechnology Journal 10,5, 609-620+ (2012). [DOI: 10.1111/j.1467-7652.2012.00692.x] DOI Google Scholar	Feedstocks
2012	Gardner, J.G. & Keating, D.H. "Genetic and functional genomic approaches for the study of plant cell wall degredation in Celvibrio japonicus." in Methods in Enzymology. vol. 510 331-347+ (2012). [DOI: 10.1016/B978-0-12-415931-0.00018-5] DOI Google Scholar	Conversion
2012	Garlock, R.J., Balan, V. & Dale, B.E. "Optimization of AFEX™ pretreatment conditions and enzyme mixtures to maximize sugar release from upland and lowland switchgrass." Bioresoure Technology 104, 757-68+ (2012). [DOI: 10.1016/j.biortech.2011.11.034] DOI Google Scholar	Deconstruction
2012	Garlock, R.J., Bals, B., Jasrotia, P., Balan, V. & Dale, B.E. "Influence of variable species composition on the saccharification of AFEX™ pretreated biomass from unmanaged fields in comparison to corn stover." Biomass and Bioenergy 37, 49-59+ (2012). [DOI: 10.1016/j.biombioe.2011.12.036] DOI Google Scholar	Deconstruction
2012	Garlock, R.J., Wong, Y.S., Balan, V. & Dale, B.E. "AFEX pretreatment and enzymatic conversion of black locust (Robinia pseudoacacia L.) to soluble sugars." BioEnergy Research 5,2, 306-318+ (2012). [DOI: 10.1007/s12155-011-9134-6] DOI Google Scholar	Deconstruction
2012	Gärtner, K., Lechno-Yossef, S., Cornish, A.J., Wolk, P. & Hegg, E.L. "Expression of Shewanella oneidensis MR-1 [FeFe]-hydrogenase genes in Anabaena sp. strain PCC 7120." Applied and Environmental Microbiology 78,24, 8579-8586+ (2012). [DOI: 10.1128/AEM.01959-12] DOI Google Scholar	Deconstruction, Conversion
2012	Grieshop, M.J., Werling, B.P., Buehrer, K., Perrone, J., Isaacs, R. & Landis, D.A. "Big brother is watching: studying insect predation in the age of digital surveillance." American Entomologist 58,3, 172-182+ (2012). [DOI: 10.1093/ae/58.3.172] DOI Google Scholar	Sustainability
2012	Gunckel, K., Mohan, L., Covitt, B.A. & Anderson, C.W. "Addressing challenges in developing learning progressions for environmental science literacy." in Learning progressions in science: Current challenges and future directions. 39-75+ (Sense Publishers, 2012). [DOI: 10.1007/978-94-6091-824-7_4] DOI Google Scholar
2012	Gurbuz, E.I., Wettstein, S.G. & Dumesic, J.A. "Conversion of hemicellulose to furfural and levulinic acid using biphasic reactors with alkylphenol solvents." ChemSusChem 5,2, 383-387+ (2012). [DOI: 10.1002/cssc.201100608] DOI Google Scholar	Conversion
2012	Haft, R., Gardner, J. & Keating, D. "Quantitative colorimetric measurement of cellulose degradation under microbial culture conditions." Applied Microbiology and Biotechnology 94,1, 223-9+ (2012). [DOI: 10.1007/s00253-012-3968-5] DOI Google Scholar	Conversion
2012	Hansey, C.N., Vaillancourt, B., Sekhon, R.S., de Leon, N., Kaeppler, S.M. & Buell, R. "Maize (Zea mays L.) genome diversity as revealed by RNA-sequencing." PLOS ONE 7,3, (2012). [DOI: 10.1371/journal.pone.0033071] DOI Google Scholar	Feedstocks
2012	Hao, X., Thelen, K.D. & Gao, J. "Prediction of the ethanol yield of dry-grind maize grain using near infrared spectroscopy." Biosystems Engineering 112,3, 161-170+ (2012). [DOI: 10.1016/j.biosystemseng.2012.03.007] DOI Google Scholar	Sustainability
2012	Harholt, J., Jensen, J.K., Verhertbruggen, Y., Sogaard, C., Bernard, S., Nafisi, M., Poulsen, C.P., Geshi, N., Sakuragi, Y., Driouich, A., et al. "ARAD proteins associated with pectic Arabinan biosynthesis form complexes when transiently overexpressed in planta." Planta 236,1, 115-128+ (2012). [DOI: 10.1007/S00425-012-1592-3] DOI Google Scholar	Feedstocks
2012	Hittinger, C.T. "Endless rots most beautiful." Science 336, 1649-1650+ (2012). [DOI: 10.1126] DOI Google Scholar	Conversion
2012	Hoover, S.W., Youngquist, T., Angart, P.A., Withers, S.T., Lennen, R.M. & Pfleger, B.F. "Isolation of improved free fatty acid overproducing strains of Escherichia coli via Nile red based high-throughput screening." Environmental Progress & Sustainable Energy 31,1, 17-23+ (2012). [DOI: 10.1002/ep.10599] DOI Google Scholar	Conversion
2012	Hufford, M.B., Xu, X., van Heerwaarden, J., Pyhajarvi, T., Chia, J.-M., Cartwright, R.A., Elshire, R.J., Glaubitz, J.C., Guill, K.E., Kaeppler, S.M., et al. "Comparative population genomics of maize domestication and improvement." Nature Genetics 44,7, 808-11+ (2012). [DOI: 10.1038/ng.2309] DOI Google Scholar	Feedstocks
2012	Izaurralde, R.C., McGill, W.B. & Williams, J.R. "Development and application of the EPIC Model for carbon cycle, greenhouse gas mitigation, and biofuel studies." in Managing Agricultural Greenhouse Gases: Coordinated Agricultural Research through GRACEnet to Address our Changing Climate. 293-308+ (Academic Press, 2012). [DOI: 10.1016/B978-0-12-386897-8.00017-6] DOI Google Scholar	Sustainability
2012	Jensen, J.K., Schultink, A., Keegstra, K., Wilkerson, C.G. & Pauly, M. "RNA-Seq analysis of developing nasturtium seeds (Tropaeolum majus): identification and characterization of an additional galactosyltransferase involved in xyloglucan biosynthesis." Molecular Plant 5,5, 984-992+ (2012). [DOI: 10.1093/mp/sss032] DOI Google Scholar	Feedstocks
2012	Jin, H. & Anderson, C.W. "Developing assessments for a learning progression on carbon-transforming processes in socio-ecological systems." in Learning progressions in science: Current challenges and future directions. 151-181+ (Sense Publishers, 2012). Google Scholar
2012	Jin, M., Balan, V., Gunawan, C. & Dale, B.E. "Quantitatively understanding reduced xylose fermentation performance in AFEX™ treated corn stover hydrolysate using Saccharomyces cerevisiae 424A (LNH-ST) and Escherichia coli KO11." Bioresource Technology 111, 294–300+ (2012). [DOI: 10.1016/j.biortech.2012.01.154] DOI Google Scholar	Deconstruction
2012	Jin, M., Gunawan, C., Balan, V. & Dale, B.E. "Consolidated bioprocessing (CBP) of AFEX™-pretreated corn stover for ethanol production using Clostridium phytofermentans at a high solids loading." Biotechnology and Bioengineering 109,8, 1929-1936+ (2012). [DOI: 10.1002/bit.24458] DOI Google Scholar	Deconstruction
2012	Jin, M., Gunawan, C., Balan, V., Lau, M.W. & Dale, B.E. "Simultaneous saccharification and co-fermentation (SSCF) of AFEX™ pretreated corn stover for ethanol production using commercial enzymes and Saccharomyces cerevisiae 424A(LNH-ST)." Bioresource Technology 110, 587–594+ (2012). [DOI: 10.1016/j.biortech.2012.01.150] DOI Google Scholar	Deconstruction
2012	Jin, M., Gunawan, C., Uppugundla, N., Balan, V. & Dale, B.E. "A novel integrated biological process for cellulosic ethanol production featuring high ethanol productivity, enzyme recycling and yeast cells reuse." Energy & Environmental Science 5,5, 7168-7175+ (2012). [DOI: 10.1039/c2ee03058f] DOI Google Scholar	Deconstruction
2012	Kaeppler, S. "Heterosis: many genes, many mechanisms—end the search for an undiscovered unifying theory." ISRN Botany 2012, (2012). [DOI: 10.5402/2012/682824] DOI Google Scholar	Feedstocks
2012	Kashefi, K. "Hyperthermophiles: metabolic diversity and biotechnological applications." in Extremophiles: Microbiology and Biotechnology. 183-232+ (Caister Academic Press, 2012). Google Scholar	Conversion