Publications

When it comes to interdisciplinary collaboration, the titles of GLBRC publications speak for themselves. Each new year of operation has seen more publications from multiple labs that span our research themes, accelerating the Center's production of the basic research that generates technology to convert cellulosic biomass to advanced biofuels and bioproducts.
Year Publication Keywords
2020
Taifan, G.S.P. & Maravelias, C.T. "Integration of graphical approaches into optimization-based design of multistage liquid extraction." Computers & Chemical Engineering 143, 107126+ (2020). [DOI: 10.1016/j.compchemeng.2020.107126]
Deconstruction, Sustainability
2020
Timokhin, V.I., Regner, M., Motagamwala, A.H., Sener, C., Karlen, S.D., Dumesic, J.A. & Ralph, J. "Production of p‐coumaric acid from corn GVL-lignin." ACS Sustainable Chemistry & Engineering 8,47, 17427–17438+ (2020). [DOI: 10.1021/acssuschemeng.0c05651]
2020
Todor, H., Osadnik, H., Campbell, E.A., Myers, K.S., Li, H., Donohue, T.J. & Gross, C.A. "Rewiring the specificity of extracytoplasmic function sigma factors." Proceedings of the National Academy of Sciences of the United States of America 117,52, 33496-33506+ (2020). [DOI: 10.1073/pnas.2020204117]
2020
Tsai, C.-J., Xu, P., Xue, L.-J., Hu, H., Nyamdari, B., Naran, R., Zhou, X., Goeminne, G., Gao, R., Gjersing, E., et al. "Compensatory guaiacyl lignin biosynthesis at the expense of syringyl lignin in 4CL1-knockout poplar." Plant Physiology 183, 123-136+ (2020). [DOI: 10.1104/pp.19.01550]
2020
Ulbrich, T.C., Friesen, M., Roley, S.S., Tiemann, L.K. & Evans, S.E. "Intraspecific variability in root traits and edaphic conditions influence soil microbiomes across 12 switchgrass cultivars." Phytobiomes Journal DOI: 10.1094/PBIOMES-12-19-0069-FI, (2020). [DOI: 10.1094/pbiomes-12-19-0069-fi]
Sustainability
2020
VanWallendael, A., Bonnette, J., Juenger, T.E., Fritschi, F.B., Fay, P.A., Mitchell, R.B., Lloyd-Reilley, J., Rouquette, F.M., Bergstrom, G.C. & Lowry, D.B. "Geographic variation in the genetic basis of resistance to leaf rust between locally adapted ecotypes of the biofuel crop switchgrass (Panicum virgatum)." New Phytologist 227,6, 1696-1708+ (2020). [DOI: 10.1111/nph.16555]
Sustainability
2020
Vera, J.M., Ghosh, I.N., Zhang, Y., Hebert, A.S., Coon, J.J. & Landick, R. "Genome-scale transcription-translation mapping reveals features of Zymomonas mobilis transcription units and promoters." mSystems 5,4, (2020). [DOI: 10.1128/mSystems.00250-20]
2020
Walker, T.W., Frelka, N., Shen, Z., Chew, A.K., Banick, J., Grey, S., Kim, M.S., Dumesic, J.A., Van Lehn, R.C. & Huber, G.W. "Recycling of multilayer plastic packaging materials by solvent-targeted recovery and precipitation." Science Advances 6,47, (2020). [DOI: 10.1126/sciadv.aba7599]
2020
Walker, T.W., Kuch, N., Meulen, K.A.V., Clewett, C.F.M., Huber, G.W., Fox, B.G. & Dumesic, J.A. "Solid-state NMR studies of solvent-mediated, acid-catalyzed woody biomass pretreatment for enzymatic conversion of residual cellulose." ACS Sustainable Chemistry & Engineering 8,16, 6551-6563+ (2020). [DOI: 10.1021/acssuschemeng.0c01538]
2020
Wang, S., Sanford, G.R., Robertson, P., Jackson, R.D. & Thelen, K.D. "Perennial bioenergy crop yield and quality response to nitrogen fertilization." BioEnergy Research 13, 157-166+ (2020). [DOI: 10.1007/s12155-019-10072-z]
2020
Xu, J., Roley, S.S., Tfaily, M.M., Chu, R.K. & Tiedje, J.M. "Organic amendments change soil organic C structure and microbial community but not total organic matter on sub-decadal scales." Soil Biology and Biochemistry 150, 107986+ (2020). [DOI: 10.1016/j.soilbio.2020.107986]
Sustainability
2020
Yamamoto, M., Tomiyama, H., Koyama, A., Okuizumi, H., Liu, S., Vanholme, R., Goeminne, G., Hirai, Y., Shi, H., Nuoendagula, N., et al. "A century-old mystery unveiled: Sekizaisou is a natural lignin mutant." Plant Physiology 182, 1821-1828+ (2020). [DOI: 10.1104/pp.19.01467]
2020
Yu, L., Harris, E., Lewicka-Szczebak, D., Barthel, M., Bloomberg, M.R.A., Harris, S.J., Johnson, M.S., Lehmann, M.F., Liisberg, J., Muller, C., et al. "What can we learn from N2O isotope data? - Analytics, processes and modelling." Rapid Communications in Mass Spectrometry 34,20, (2020). [DOI: 10.1002/rcm.8858]
2020
Zhang, Y., Haan, N.L. & Landis, D.A. "Landscape composition and configuration have scale-dependent effects on agricultural pest suppression." Agriculture, Ecosystems & Environment 302, 107085+ (2020). [DOI: 10.1016/j.agee.2020.107085]
Sustainability
2020
Zhang, Y., Serate, J., Xie, D., Gajbhiye, S., Kulzer, P., Sanford, G., Russell, J.D., McGee, M., Foster, C., Coon, J.J., et al. "Production of hydrolysates from unmilled AFEX-pretreated switchgrass and comparative fermentation with Zymomonas mobilis." Bioresource Technology Reports 11, 100517+ (2020). [DOI: 10.1016/j.biteb.2020.100517]
2020
Zheng, H., Kim, K., Kravchenko, A., Rivers, M. & Guber, A. "Testing Os staining approach for visualizing soil organic matter patterns in intact samples via X-ray dual-energy tomography scanning." Environmental Science & Technology 54, 8980-8989+ (2020). [DOI: 10.1021/acs.est.0c01028]
2020
Zhou, Y., Klinger, G.E., Hegg, E.L., Saffron, C.M. & Jackson, J.E. "Multiple mechanisms mapped in aryl alkyl ether cleavage via aqueous electrocatalytic hydrogenation over skeletal nickel." Journal of the American Chemical Society 142,8, 4037-4050+ (2020). [DOI: 10.1021/jacs.0c00199]
Conversion
2020
Zhu, X., Jackson, R.D., DeLucia, E.H., Tiedje, J.M. & Liang, C. "The soil microbial carbon pump: from conceptual insights to empirical assessments." Global Change Biology 26,11, 6032-6039+ (2020). [DOI: 10.1111/gcb.15319]
Sustainability
2019
Abraha, M., Gelfand, I., Hamilton, S.K., Chen, J. & Robertson, P. "Carbon debt of field-scale conservation reserve program grasslands converted to annual and perennial bioenergy crops." Environmental Research Letters 14,2, 024019+ (2019). [DOI: 10.1088/1748-9326/aafc10]
Sustainability
2019
Agarwal, U.P., Ralph, S.A., Padmakshan, D., Liu, S. & Foster, C.E. "Estimation of syringyl units in wood lignins by FT-Raman spectroscopy." Journal of Agricultural and Food Chemistry 67,15, 4367-4374+ (2019). [DOI: 10.1021/acs.jafc.8b06707]
Feedstocks
2019
Ando, D. & Ralph, J. "Method to regioselectively iodine-tag free-phenolic aromatic endgroups in lignin for 1H–13C-HSQC NMR analysis." ACS Sustainable Chemistry & Engineering 7, 18624-18629+ (2019). [DOI: 10.1021/acssuschemeng.9b04981]
2019
Avci, U., Zhou, X., Pattathil, S., Sousa, L. da C., Hahn, M.G., Dale, B., Xu, Y. & Balan, V. "Effects of extractive ammonia pretreatment on the ultrastructure and gllycan composition of corn stover." Frontiers in Energy Research 7, 85+ (2019). [DOI: 10.3389/fenrg.2019.00085]
Deconstruction
2019
Azodi, C.B., Bolger, E., McCarren, A., Roantree, M., Campos, G. de L. & Shiu, S.-H. "Benchmarking parametric and machine learning models for genomic prediction of complex traits." G3: Genes|Genomes|Genetics 9,11, 3691-3702+ (2019). [DOI: 10.1534/g3.119.400498]
2019
Baker, E.C.P. & Hittinger, C.T. "Evolution of a novel chimeric maltotriose transporter in Saccharomyces eubayanus from parent proteins unable to perform this function." PLOS Genetics 15,4, (2019). [DOI: 10.1371/journal.pgen.1007786]
Conversion
2019
Baker, E.C.P., Peris, D., Moriarty, R.V., Li, X.C., Fay, J.C. & Hittinger, C.T. "Mitochondrial DNA and temperature tolerance in lager yeasts." Science Advances 5,1, (2019). [DOI: 10.1126/sciadv.aav1869]
Conversion