Publications

When it comes to interdisciplinary collaboration, the titles of GLBRC publications speak for themselves. Each new year of operation has seen more publications from multiple labs that span our research themes, accelerating the Center's production of the basic research that generates technology to convert cellulosic biomass to advanced biofuels and bioproducts.
Year Publication Keywords
2017
Izaurralde C, McGill WB, Williams JR, Jones CD, Link RP, Manowitz DH, Schwab E, Zhang X, Robertson P, Millar N (2017) Simulating microbial denitrification with EPIC: model description and evaluation. Ecological Modeling 359: 349-362+. doi: 10.1016/j.ecolmodel.2017.06.007
Sustainability
2017
Emery SM, Reid ML, Bell-Dereske L, Gross KL (2017) Soil mycorrhizal and nematode diversity vary in response to bioenergy crop identity and fertilization. Global Change Biology – Bioenergy 9: 1644-1656+. doi: 10.1111/gcbb.12460
Sustainability
2017
Hansen NL, Heskes AM, Hamberger B, Olsen CE, Hallström BM, Andersen-Ranberg J, Hamberger B (2017) The terpene synthase gene family in Tripterygium wilfordii harbors a labdane-type diterpene synthase among the monoterpene synthase TPS-b subfamily. The Plant Journal 89: 429-441+. doi: 10.1111/tpj.13410
Feedstocks
2017
Smith RA, Cass CL, Mazaheri M, Sekhon RS, Heckwolf M, Kaeppler H, de Leon N, Mansfield SD, Kaeppler SM, Sedbrook JC, et al (2017) Suppression of CINNAMOYL-CoA REDUCTASE increases the level of monolignol ferulates incorporated into maize lignins. Biotechnology for Biofuels 10: 109+. doi: 10.1186/s13068-017-0793-1
Feedstocks
2017
Zhou S, Runge T, Karlen SD, Ralph J, Gonzales-Vigil E, Mansfield SD (2017) Chemical pulping advantages of Zip-lignin hybrid poplar. ChemSusChem 10: 3565-3573+. doi: 10.1002/cssc.201701317
Feedstocks, Sustainability
2017
Hilley JL, Weers BD, Truong SK, McCormick RF, Mattison AJ, McKinley BA, Morishige DT, Mullet JE (2017) Sorghum Dw2 encodes a protein kinase regulator of stem internode length. Scientific Reports 7: 4616+. doi: 10.1038/s41598-017-04609-5
Feedstocks
2017
Novo M, Silvar C, Merino F, Martínez-Cortés T, Lu F, Ralph J, Pomar F (2017) Deciphering the role of the phenylpropanoid metabolism in the tolerance of Capsicum annuum L. to Verticillium dahliae Kleb. Plant Science 258: 12-20+. doi: 10.1016/j.plantsci.2017.01.014
Feedstocks
2017
Steffan SA, Dharampal PS, Diaz-Garcia L, Currie CR, Zalapa J, Hittinger CT (2017) Empirical, metagenomic, and computational techniques illuminate the mechanisms by which fungicides compromise bee health. Journal of Visualized Experiments. doi: 10.3791/54631
Conversion
2017
Grabowski PP, Evans J, Daum C, Deshpande S, Barry KW, Kennedy M, Ramstein G, Kaeppler SM, Buell R, Jiang Y, et al (2017) Genome-wide associations with flowering time in switchgrass using exome-capture sequencing data. New Phytologist 213: 154-169+. doi: 10.1111/nph.14101
Feedstocks
2017
Truong SK, McCormick RF, Mullet JE (2017) Bioenergy sorghum crop model predicts VPD-limited transpiration traits enhance biomass yield in water-limited environments. Frontiers in Plant Science 8: 335+. doi: 10.3389/fpls.2017.00335
Feedstocks
2017
Jensen JK, Wilkerson CG (2017) Brachypodium as an experimental system for the study of stem parenchyma biology in grasses. PLOS ONE. doi: 10.1371/journal.pone.0173095
Feedstocks
2017
Van Acker R, Dejardin A, Desmet S, Hoengenaert L, Vanholme R, Morreel K, Laurans F, Kim H, Santoro N, Foster C, et al (2017) Different routes for conifer- and sinapaldehyde and higher saccharification upon deficiency in the dehydrogenase CAD1. Plant Physiology 175: 1018-1039+. doi: 10.1104/pp.17.00834
Feedstocks
2017
Singh R, Hu J, Regner MR, Round JW, Ralph J, Saddler JN, Eltis LD (2017) Enhanced delignification of steam-pretreated poplar by a bacterial laccase. Scientific Reports 7: 42121+. doi: 10.1038/srep42121
Feedstocks
2017
Pateraki I, Andersen-Ranberg J, Jensen NB, Wubshet SG, Heskes AM, Forman V, Hallström B, Hamberger B, Motawia MS, Olsen CE, et al (2017) Total biosynthesis of the cyclic AMP booster forskolin from Coleus forskohlii. eLife. doi: 10.7554/eLife.23001
Feedstocks
2017
Sarks C, Jin M, Balan V, Dale BE (2017) Fed-batch hydrolysate addition and cell separation by settling in high cell density lignocellulosic ethanol fermentations on AFEX™ corn stover in the Rapid Bioconversion with Integrated recycling Technology process. Journal of Industrial Microbiology & Biotechnology 144: 1261-1272+. doi: 10.1007/s10295-017-1949-5
Deconstruction
2017
Hansen NL, Nissen JN, Hamberger B (2017) Two residues determine the product profile of the class II diterpene synthases TPS14 and TPS21 of Tripterygium wilfordii. Phytochemistry 138: 52-56+. doi: 10.1016/j.phytochem.2017.02.022
Feedstocks
2017
Walker JA, Pattathil S, Bergeman LF, Beebe ET, Deng K, Mirzai M, Northen TR, Hahn MG, Fox BG (2017) Determination of glycoside hydrolase specificities during hydrolysis of plant cell walls using glycome profiling. Biotechnology for Biofuels 10: 31+. doi: 10.1186/s13068-017-0703-6
Deconstruction
2017
McDonald BR, Currie CR (2017) Lateral gene transfer dynamics in the ancient bacterial genus Streptomyces. mBio. doi: 10.1128/mBio.00644-17
Deconstruction
2017
Yenkie KM, Wu W, Maravelias CT (2017) Synthesis and analysis of separation networks for the recovery of intracellular chemicals generated from microbial-based conversions. Biotechnology for Biofuels 10: 119+. doi: 10.1186/s13068-017-0804-2
Deconstruction
2017
Sakai S, Rothamer DA (2017) Effect of ethanol blending on particulate formation from premixed combustion in spark-ignition engines. Fuel 196: 154-168+. doi: 10.1016/j.fuel.2017.01.070
Conversion
2017
Haase MAB, Kominek J, Langdon QK, Kurtzman CP, Hittinger CT (2017) Genome sequence and physiological analysis of Yamadazyma laniorum f.a. sp. nov. and a reevaluation of the apocryphal xylose fermentation of its sister species Candida tenuis. FEMS Yeast Research. doi: 10.1093/femsyr/fox019
Conversion
2017
Miesel JR, Jach-Smith LC, Renz MJ, Jackson RD (2017) Distribution of switchgrass (Panicum virgatum L.) aboveground biomass in response to nitrogen addition and across harvest dates. Biomass and Bioenergy 100: 74-83+. doi: 10.1016/j.biombioe.2017.03.012
Sustainability
2017
Zhang B, Penton R, Xue C, Quensen JF, Roley SS, Guo J, Garoutte A, Zheng T, Tiedje JM (2017) Soil depth and crop determinants of bacterial communities under ten biofuel cropping systems. Soil Biology and Biochemistry 112: 140-152+. doi: 10.1016/j.soilbio.2017.04.019
Sustainability
2017
Smith RA, Schuetz M, Karlen SD, Bird D, Tokunaga N, Sato Y, Mansfield SD, Ralph J, Samuels L (2017) Defining the diverse cell populations contributing to lignification in Arabidopsis stems. Plant Physiology 174: 1028-1036+. doi: 10.​1104/​pp.​17.​00434
Feedstocks
2017
Kong L, Wu Y, Maravelias CT (2017) Simultaneous utility and heat exchanger area targeting for integrated process synthesis and heat integration. Industrial & Engineering Chemistry Research 56: 11847-11859+. doi: 10.1021/acs.iecr.7b01689
Deconstruction