Publications

When it comes to interdisciplinary collaboration, the titles of GLBRC publications speak for themselves. Each new year of operation has seen more publications from multiple labs that span our research themes, accelerating the Center's production of the basic research that generates technology to convert cellulosic biomass to advanced biofuels and bioproducts.
Year Publication Keywords
2022
York, L.M., Cumming, J.R., Trusiak, A., Bonito, G., von Haden, A.C., Kalluri, U.C., Tiemann, L.K., Andeer, P.F., Blanc-Betes, E., Diab, J.H., et al. "Bioenergy underground: challenges and opportunities forphenotyping roots and the microbiome for sustainable bioenergycrop production." The Plant Phenome Journal 5,1, (2022). [DOI: 10.1002/ppj2.20028]
2022
Yu, K.M.J., Oliver, J., McKinley, B., Weers, B., Fabich, H.T., Evetts, N., Conradi, M.S., Altobelli, S.A., Marshall-Colon, A. & Mullet, J. "Bioenergy sorghum stem growth regulation: intercalary meristem localization, development and gene regulatory network analysis." The Plant Journal DOI: 10.1111/tpj.15960, (2022). [DOI: 10.1111/tpj.15960]
2022
Zahorec, A., Reid, M.L., Tiemann, L.K. & Landis, D.A. "Perennial grass bioenergy cropping systems: impacts on soil fauna and implications for soil carbon accrual." Global Change Biology – Bioenergy 14,1, 4-23+ (2022). [DOI: 10.1111/gcbb.12903]
2022
Zhang, B., Munske, G.R., Timokhin, V.I., Ralph, J., Davydov, D.R., Vermerris, W., Sattler, S.E. & Kang, C.H. "Functional and structural insight into the flexibility of cytochrome P450 reductases from Sorghum bicolor and its implications for lignin composition." Journal of Biological Chemistry 298,4, 101761+ (2022). [DOI: 10.1016/j.jbc.2022.101761]
2022
Zhang, L., MacQueen, A., Weng, X., Behrman, K.D., Bonnette, J., Reilley, J.L., Rouquette, F.M., Fay, P.A., Wu, Y., Fritschi, F.B., et al. "The genetic basis for panicle trait variation in switchgrass (Panicum virgatum)." Theoretical and Applied Genetics 135,8, 2577-2592+ (2022). [DOI: 10.1007/s00122-022-04096-x]
 Sustainability
2022
Zhang, Y., Myers, K.S., Place, M., Serate, J., Xie, D., Pohlmann, E., La Reau, A., Landick, R. & Sato, T.K. "Transcriptiomic data sets for Zymomonas mobilis 2032 during fermentation of ammonia fiber expansion (AFEX)-pretreated corn stover and switchgrass hydrolsates." Microbiology Resource Announcements 11,9, (2022). [DOI: 10.1128/mra.00564-22]
2022
Zheng, H., Guber, A.K., Kuzyakov, Y., Zhang, W. & Kravchenko, A.N. "Plant species and plant neighbor identity affect associations between plant assimilated C inputs and soil pores." Geoderma 407, 115565+ (2022). [DOI: 10.1016/j.geoderma.2021.115565]
2022
Zhou, Y., Klinger, G.E., Hegg, E.L., Saffron, C.M. & Jackson, J.E. "Skeletal Ni electrode-catalyzed C-O cleavage of diaryl ethers entails direct elimination via benzyne intermediates." Nature Communications 13,1, 2050+ (2022). [DOI: 10.1038/s41467-022-29555-3]
 Deconstruction
2021
Abraha, M., Chen, J., Hamilton, S.K., Sciusco, P., Lei, C., Shirkey, G., Yuan, J. & Robertson, P. "Albedo-induced global warming impact of Conservation Reserve Program grasslands converted to annual and perennial bioenergy crops." Environmental Research Letters 16,8, 084059+ (2021). [DOI: 10.1088/1748-9326/ac1815]
2021
Abu-Omar, M.M., Barta, K., Beckham, G.T., Luterbacher, J.S., Ralph, J., Rinaldi, R., Román-Leshkov, Y., Samec, J.S.M., Sels, B.F. & Wang, F. "Guidelines for performing lignin-first biorefining." Energy & Environmental Science 14,1, 262-292+ (2021). [DOI: 10.1039/D0EE02870C]
2021
Alherech, M., Omolabake, S., Holland, C.M., Klinger, G.E., Hegg, E.L. & Stahl, S.S. "From lignin to valuable aromatic chemicals: lignin depolymerization and monomer separation via centrifugal partition chromatography." ACS Central Science 7,11, 1831–1837+ (2021). [DOI: 10.1021/acscentsci.1c00729]
2021
Ando, D., Lu, F., Kim, H., Eugene, A., Tobimatsu, Y., Vanholme, R., Elder, T.J., Boerjan, W. & Ralph, J. "Incorporation of catechyl monomers into lignins: lignification from the non-phenolic end via Diels–Alder cycloaddition?" Green Chemistry 23,22, 8995-9013+ (2021). [DOI: 10.1039/D1GC03022A]
2021
Angelos, E., Ko, D.K., Zemelis-Durfee, S. & Brandizzi, F. "Relevance of the unfolded protein response to spaceflight-induced transcriptional reprogramming in Arabidopsis." Astrobiology 21, 3+ (2021). [DOI: 10.1089/ast.2020.2313]
 Feedstocks
2021
Basso, B. "Precision conservation for a changing climate." Nature Food 2, 322-323+ (2021). [DOI: 10.1038/s43016-021-00283-z]
 Sustainability
2021
Basso, B., Jones, J.W., Antle, J., Martinez-Feria, R.A. & Verma, B. "Enabling circularity in grain production systems with novel technologies and policy." Agricultural Systems 193, 103244+ (2021). [DOI: 10.1016/j.agsy.2021.103244]
 Sustainability
2021
Basso, B., Martinez-Feria, R.A., Rill, L. & Ritchie, J.T. "Contrasting long-term temperature trends reveal minor changes in projected potential evapotranspiration in the US Midwest." Nature Communications 12, 1476+ (2021). [DOI: 10.1038/s41467-021-21763-7]
 Sustainability
2021
Basyal, B., Foster, C., Gross, K.L. & Emery, S.M. "Nitrogen fertilizer, arbuscular mycorrhizal fungi, and soil nematodes affect lignin quality and quantity in switchgrass (Panicum virgatum L.)." BioEnergy Research 15, 1033–1041+ (2021). [DOI: 10.1007/s12155-021-10284-2]
2021
Beach, N.K., Myers, K.S., Owen, B.R., Seib, M., Donohue, T.J. & Noguera, D.R. "Exploring the meta-regulon of the CRP/FNR family of global transcriptional regulators in a partial-nitritation anammox microbiome." mSystems 6,5, (2021). [DOI: 10.1128/mSystems.00906-21]
2021
Belanger, M.A., Vizza, C., Robertson, P. & Roley, S.S. "Quantifying and correcting for pre-assay CO2 loss in short-term carbon mineralization assays." SOIL 7, 47-52+ (2021). [DOI: 10.5194/soil-7-47-2021]
2021
Bell-Dereske, L.P. & Evans, S.E. "Contributions of environmental and maternal transmission to the assembly of leaf fungal endophyte communities." Proceedings of the Royal Society B 288,1956, 20210621+ (2021). [DOI: 10.1098/rspb.2021.0621]
 Sustainability
2021
Bourbonnais, A., Frey, C., Sun, X., Bristow, L.A., Jayakumas, A., Ostrom, N.E., Casciotti, K.L. & Ward, B.B. "Protocols for assessing transformation rates of nitrous oxide in the water column." Frontiers in Marine Science 8, 611937+ (2021). [DOI: 10.3389/fmars.2021.611937]
2021
Bowsher, A.W., Benucci, G.M.N., Bonito, G. & Shade, A. "Seasonal dynamics of core fungi in the switchgrass phyllosphere, and co-occurrence with leaf bacteria." Phytobiomes Journal 5,1, 60-68+ (2021). [DOI: 10.1094/pbiomes-07-20-0051-r]
 Sustainability
2021
Cadez, N., Bellora, N., Ulloa, R., Tome, M., Petkovic, H., Groenewald, M., Hittinger, C.T. & Libkind, D. "Hanseniaspora smithiae sp. nov., a novel apiculate yeast species from Patagonian forests that lacks the typical genomic domestication signatures for fermentative environments." Frontiers in Microbiology 12, 679894+ (2021). [DOI: 10.3389/fmicb.2021.679894]
2021
Cao, Y., Yan, X., Ran, S., Ralph, J., Smith, R.A., Chen, X., Qu, C., Li, J. & Liu, L. "Knockout of the lignin pathway gene BnF5H decreases the S/G lignin compositional ratio and improves S. sclerotiorum resistance in B. napus." Plant, Cell & Environment 45,1, 248-261+ (2021). [DOI: 10.1111/pce.14208]
2021
Cates, A.M., Wills, B.D., Kim, T.N., Landis, D.A., Gratton, C., Read, H.W. & Jackson, R.D. "No evidence of top-down effects by ants on litter decomposition in a temperate grassland." Ecosphere 12,7, (2021). [DOI: 10.1002/ecs2.3638]
 Sustainability