Publications

When it comes to interdisciplinary collaboration, the titles of GLBRC publications speak for themselves. Each new year of operation has seen more publications from multiple labs that span our research themes, accelerating the Center's production of the basic research that generates technology to convert cellulosic biomass to advanced biofuels and bioproducts.

Year	Publication	Keywords
2020	Poe, J., Reed, D.E., Abraha, M., Chen, J., Dahlin, K.M. & Desai, A.R. "Geospatial coherence of surface-atmosphere fluxes in the upper Great Lakes region." Agricultural and Forest Meteorology 295, 108188+ (2020). [DOI: 10.1016/j.agrformet.2020.108188] DOI Google Scholar	Sustainability
2020	Ralph, J. "Tricin and tricin-lignins in Medicago versus in monocots." New Phytologist 228,1, 11-14+ (2020). [DOI: 10.1111/nph.16827] DOI Google Scholar
2020	Reed, D.E., Chen, J., Abraha, M., Robertson, P. & Dahlin, K.M. "The shifting role of mRUE for regulating ecosystem production." Ecosystems 23, 359–369+ (2020). [DOI: 10.1007/s10021-019-00407-4] DOI Google Scholar	Sustainability
2020	Roley, S.S., Ulbrich, T.C. & Robertson, P. "Nitrogen fixation and resorption efficiency differences among twelve upland and lowland switchgrass cultivars." Phytobiomes DOI: 10.1094/PBIOMES-11-19-0064-FI, (2020). [DOI: 10.1094/PBIOMES-11-19-0064-FI] DOI Google Scholar
2020	Ruan, L. & Robertson, P. "No-till establishment improves the climate benefit of bioenergy crops on marginal grasslands." Soil Science Society of America Journal 84,4, 1280-1295+ (2020). [DOI: 10.1002/saj2.20082] DOI Google Scholar
2020	Ryu, J., Kong, L., de Lima, A.E.P. & Maravelias, C.T. "A generalized superstructure-based framework for process synthesis." Computers & Chemical Engineering 133, 106653+ (2020). [DOI: 10.1016/j.compchemeng.2019.106653] DOI Google Scholar
2020	Ryu, J. & Maravelias, C.T. "Efficient generalized shortcut distillation model with improved accuracy for superstructure-based process synthesis." AIChE Journal 66,11, (2020). [DOI: 10.1002/aic.16994] DOI Google Scholar	Deconstruction
2020	Ryu, J. & Maravelias, C.T. "Computationally efficient optimization models for preliminary distillation column design and separation energy targeting." Computers & Chemical Engineering 143, 107072+ (2020). [DOI: 10.1016/j.compchemeng.2020.107072] DOI Google Scholar	Sustainability
2020	Saha, D., Basso, B. & Robertson, P. "Machine learning improves predictions of agricultural nitrous oxide (N2O) emissions from intensively managed cropping systems." Environmental Research Letters DOI: 10.1088/1748-9326/abd2f3, (2020). [DOI: 10.1088/1748-9326/abd2f3] DOI Google Scholar
2020	Scarborough, M.J., Hamilton, J.J., Erb, E.A., Donohue, T.J. & Noguera, D.R. "Diagnosing and predicting mixed-culture fermentations with unicellular and guild-based metabolic models." mSystems 5,5, (2020). [DOI: 10.1128/mSystems.00755-20] DOI Google Scholar
2020	Scarborough, M.J., Myers, K.S., Donohue, T.J. & Noguera, D.R. "Medium-chain fatty acid synthesis by Candidatus Weimeria bifida, gen. nov., sp. nov., and Candidatus Pseudoramibacter fermentans, sp. nov." Applied and Environmental Microbiology 86,3, (2020). [DOI: 10.1128/AEM.02242-19] DOI Google Scholar
2020	Schwarz, B., Azodi, C.B., Shiu, S.-H. & Bauer, P. "Putative cis-regulatory elements predict iron deficiency responses in Arabidopsis roots." Plant Physiololgy 182,3, 1420-1439+ (2020). [DOI: 10.1104/pp.19.00760] DOI Google Scholar
2020	Sciusco, P., Chen, J., Abraha, M., Lei, C., Robertson, P., Lafortezza, R., Shirkey, G., Ouyang, Z., Zhang, R. & John, R. "Spatiotemporal variations of albedo in managed agricultural landscapes: inferences to global warming impacts (GWI)." Landscape Ecology 35, 1385-1402+ (2020). [DOI: 10.1007/s10980-020-01022-8] DOI Google Scholar	Sustainability
2020	Sharkey, T.D., Preiser, A.L., Weraduwage, S.M. & Gog, L. "Source of 12C in Calvin-Benson cycle intermediates and isoprene emitted from plant leaves fed with 13CO2." Biochemical Journal 477,17, 3237-3252+ (2020). [DOI: 10.1042/BCJ20200480] DOI Google Scholar
2020	Shen, A., Sakai, S. & Rothamer, D. "Parameters for screening SI engine alternative fuels for mixture formation behavior related to particulate matter formation: application to 2-methyl-3-buten-2-ol (methyl butenol, MBO)." in Spring Technical Meeting of the Central States Section of the Combustion Institute. (2020). Google Scholar	Sustainability
2020	Shen, X.-X., Li, Y., Hittinger, C.T., Chen, X.-xin & Rokas, A. "An investigation of irreproducibility in maximum likelihood phylogenetic inference." Nature Communications 11, 6096+ (2020). [DOI: 10.1038/s41467-020-20005-6] DOI Google Scholar
2020	Shen, X.-X., Steenwyk, J.L., Labella, A.L., Opulente, D.A., Zhou, X., Kominek, J., Li, Y., Groenewald, M., Hittinger, C.T. & Rokas, A. "Genome-scale phylogeny and contrasting modes of genome evolution in the fungal phylum Ascomycota." Science Advances 6,45, (2020). [DOI: 10.1126/sciadv.abd0079] DOI Google Scholar
2020	Shen, Z. & Van Lehn, R.C. "Solvent selection for the separation of lignin-derived monomers using the conductor-like screening model for real solvents." Industrial & Engineering Chemistry Research 59,16, 7755-7764+ (2020). [DOI: 10.1021/acs.iecr.9b06086] DOI Google Scholar
2020	Smercina, D.N., Bowsher, A.W., Evans, S.E., Friesen, M.L., Eder, E.K., Hoyt, D.W. & Tiemann, L.K. "Switchgrass rhizosphere metabolite chemistry driven by nitrogen availability." Phytobiomes DOI: 10.1094/PBIOMES-09-19-0055-FI, (2020). [DOI: 10.1094/PBIOMES-09-19-0055-FI] DOI Google Scholar	Sustainability
2020	Song, B., Zhao, S., Shen, W., Collings, C. & Ding, S.-Y. "Direct measurement of plant cellulose microfibril and bundles in native cell walls." Frontiers in Plant Science 11, 479+ (2020). [DOI: 10.3389/fpls.2020.00479] DOI Google Scholar
2020	Sprunger, C.D., Martin, T. & Mann, M. "Systems with greater perenniality and crop diversity enhance soil biological health." Agricultural & Environmental Letters 5,1, (2020). [DOI: 10.1002/ael2.20030] DOI Google Scholar	Sustainability
2020	Srivastava, P.A., Hegg, E.L., Fox, B.G. & Yennamalli, R.M. "PreDSLpmo: a neural network-based prediction tool for functional annotation of lytic polysaccharide monooxygenases." Journal of Biotechnology 308, 148-155+ (2020). [DOI: 10.1016/j.jbiotec.2019.12.002] DOI Google Scholar
2020	Stahlheber, K.A., Lindquist, J., Drogosh, P.D., Pennington, D. & Gross, K.L. "Predicting productivity: a trait-based analysis of variability in biomass yield among switchgrass feedstock cultivars." Agriculture, Ecosystems & Environment 300, 106980+ (2020). [DOI: 10.1016/j.agee.2020.106980] DOI Google Scholar	Sustainability
2020	Stoneman, H.R., Wrobel, R.L., Place, M., Graham, M., Krause, D.J., De Chiara, M., Liti, G., Schacherer, J., Landick, R., Gasch, A.P., et al. "CRISpy-Pop: a web tool for designing CRISPR/Cas9-driven genetic modifications in diverse populations." G3: Genes\|Genomes\|Genetics 10,11, 4287-4294+ (2020). [DOI: 10.1534/g3.120.401498] DOI Google Scholar
2020	Swinton, S.M., Dulys, F. & Klammer, S.S.H. "Why biomass residue is not as plentiful as it looks: case study on economic supply of logging residues." Applied Economic Perspectives and Policy DOI: 10.1002/aepp.13067, (2020). [DOI: 10.1002/aepp.13067] DOI Google Scholar	Sustainability

Keegstra Bioenergy Research Fellowship Program

Admin Contacts

Jennifer L. Reed

Data Set Guidelines

Publications