Publications

When it comes to interdisciplinary collaboration, the titles of GLBRC publications speak for themselves. Each new year of operation has seen more publications from multiple labs that span our research themes, accelerating the Center's production of the basic research that generates technology to convert cellulosic biomass to advanced biofuels and bioproducts.
Year Publication Keywords
2022
York, L.M., Cumming, J.R., Trusiak, A., Bonito, G., von Haden, A.C., Kalluri, U.C., Tiemann, L.K., Andeer, P.F., Blanc-Betes, E., Diab, J.H., et al. "Bioenergy underground: challenges and opportunities forphenotyping roots and the microbiome for sustainable bioenergycrop production." The Plant Phenome Journal 5,1, (2022). [DOI: 10.1002/ppj2.20028]
2022
Yu, K.M.J., Oliver, J., McKinley, B., Weers, B., Fabich, H.T., Evetts, N., Conradi, M.S., Altobelli, S.A., Marshall-Colon, A. & Mullet, J. "Bioenergy sorghum stem growth regulation: intercalary meristem localization, development and gene regulatory network analysis." The Plant Journal 112,2, 476-492+ (2022). [DOI: 10.1111/tpj.15960]
2022
Zahorec, A., Reid, M.L., Tiemann, L.K. & Landis, D.A. "Perennial grass bioenergy cropping systems: impacts on soil fauna and implications for soil carbon accrual." Global Change Biology – Bioenergy 14,1, 4-23+ (2022). [DOI: 10.1111/gcbb.12903]
2022
Zhang, B., Munske, G.R., Timokhin, V.I., Ralph, J., Davydov, D.R., Vermerris, W., Sattler, S.E. & Kang, C.H. "Functional and structural insight into the flexibility of cytochrome P450 reductases from Sorghum bicolor and its implications for lignin composition." Journal of Biological Chemistry 298,4, 101761+ (2022). [DOI: 10.1016/j.jbc.2022.101761]
2022
Zhang, L., MacQueen, A., Weng, X., Behrman, K.D., Bonnette, J., Reilley, J.L., Rouquette, F.M., Fay, P.A., Wu, Y., Fritschi, F.B., et al. "The genetic basis for panicle trait variation in switchgrass (Panicum virgatum)." Theoretical and Applied Genetics 135,8, 2577-2592+ (2022). [DOI: 10.1007/s00122-022-04096-x]
 Sustainability
2022
Zhang, Y., Myers, K.S., Place, M., Serate, J., Xie, D., Pohlmann, E., La Reau, A., Landick, R. & Sato, T.K. "Transcriptomic data sets for Zymomonas mobilis 2032 during fermentation of ammonia fiber expansion (AFEX)-pretreated corn stover and switchgrass hydrolysates." Microbiology Resource Announcements 11,9, (2022). [DOI: 10.1128/mra.00564-22]
2022
Zheng, H., Guber, A.K., Kuzyakov, Y., Zhang, W. & Kravchenko, A.N. "Plant species and plant neighbor identity affect associations between plant assimilated C inputs and soil pores." Geoderma 407, 115565+ (2022). [DOI: 10.1016/j.geoderma.2021.115565]
2022
Zhou, Y., Klinger, G.E., Hegg, E.L., Saffron, C.M. & Jackson, J.E. "Skeletal Ni electrode-catalyzed C-O cleavage of diaryl ethers entails direct elimination via benzyne intermediates." Nature Communications 13,1, 2050+ (2022). [DOI: 10.1038/s41467-022-29555-3]
 Deconstruction
2022
Alred, B., Haan, N., Landis, D.A. & Szűcs, M. "Does the presence of the biological control agent, Hypena opulenta (Lepidoptera: Erebidae) on swallow-worts deter monarch oviposition?" Environmental Entomology 51,1, 77-82+ (2022). [DOI: 10.1093/ee/nvab121]
2022
Beach, N.K., Myers, K.S., Donohue, T.J. & Noguera, D.R. "Metagenomes from 25 low-abundance microbes in a partial nitritation anammox microbiome." Microbiology Resource Announcements 11,6, (2022). [DOI: 10.1128/mra.00212-22]
2022
da Costa, P.B., Benucci, G.M.N., Chou, M.-Y., Van Wyk, J., Chretien, M. & Bonito, G. "Soil origin and plant genotype modulate switchgrass aboveground productivity and root microbiome assembly." mBio 13,2, (2022). [DOI: 10.1128/mbio.00079-22]
2022
Bibik, J.D., Weraduwage, S.M., Banerjee, A., Robertson, K.’shawn, Espinoza-Corral, R., Sharkey, T.D., Lundquist, P.K. & Hamberger, B.R. "Pathway engineering, re-targeting, and synthetic scaffolding improve the production of squalene in plants." ACS Synthetic Biology 11,6, 2121-2133+ (2022). [DOI: 10.1021/acssynbio.2c00051]
2022
Bloom, E.H., Graham, K.K., Haan, N.L., Heck, A.R., Gut, L.J., Landis, D.A., Milbrath, M., Quinlan, G.M., Wilson, J.K., Zhang, Y., et al. "Responding to the US national pollinator plan: a case study in Michigan." Frontiers in Ecology and the Environment 20,2, 84-92+ (2022). [DOI: 10.1002/fee.2430]
2022
Bouché, F., Woods, D.P., Linden, J., Li, W., Mayer, K.S., Amasino, R.M. & Périlleux, C. "EARLY FLOWERING 3 and photoperiod sensing in Brachypodium distachyon." Frontiers in Plant Science 12, 769194+ (2022). [DOI: 10.3389/fpls.2021.769194]
 Feedstocks
2022
Buessecker, S., Sarno, A.F., Reynolds, M.C., Chavan, R., Park, J., Ortiz, M.F., Pérez-Castillo, A.G., Pisco, G.P., Urquiza-Muñoz, J.D., Reis, L.P., et al. "Coupled abiotic-biotic cycling of nitrous oxide in tropical peatlands." Nature Ecology & Evolution 6, 1881-1890+ (2022). [DOI: 10.1038/s41559-022-01892-y]
2022
Case, N.T., Berman, J., Blehert, D.S., Cramer, R.A., Cuomo, C., Currie, C.R., Ene, I.V., Fisher, M.C., Fritz-Laylin, L.K., Gerstein, A.C., et al. "The future of fungi: threats and opportunities." G3: Genes | Genomes | Genetics 12,11, (2022). [DOI: 10.1093/g3journal/jkac224]
2022
Casler, M.D., Lee, D.K., Mitchell, R.B., Moore, K.J., Adler, P.R., Sulc, M., Johnson, K.D., Kallenbach, R.L., Boe, A.R., Mathison, R.D., et al. "Biomass quality responses to selection for increased biomass yield in perennial energy grasses." BioEnergy Research DOI: 10.1007/s12155-022-10513-2, (2022). [DOI: 10.1007/s12155-022-10513-2]
 Sustainability
2022
Cates, A.C., Jilling, A., Tfaily, M.M. & Jackson, R.D. "Temperature and moisture alter organic matter composition across soil fractions." Geoderma 409, 115628+ (2022). [DOI: 10.1016/j.geoderma.2021.115628]
 Sustainability
2022
Chipkar, S., Smith, K., Whelan, E.M., Debrauske, D.J., Jen, A., Overmyer, K.A., Senyk, A., Hooker-Moericke, L., Gallmeyer, M., Coon, J.J., et al. "Water-soluble saponins accumulate in drought-stressed switchgrass and may inhibit yeast growth during bioethanol production." Biotechnology for Biofuels and Bioproducts 15, 116+ (2022). [DOI: 10.1186/s13068-022-02213-y]
2022
De Meester, B., Oyarce, P., Vanholme, R., Van Acker, R., Tsuji, Y., Vangeel, T., Van den Bosch, S., Van Doorsselaere, J., Sels, B., Ralph, J., et al. "Engineering curcumin biosynthesis in poplar affects lignification and biomass yield." Frontiers in Plant Science 13, 943349+ (2022). [DOI: 10.3389/fpls.2022.943349]
2022
de Vries, L., MacKay, H.A., Smith, R.A., Mottiar, Y., Karlen, S.D., Unda, F., Muirragui, E., Bingman, C., Meulen, K.V., Beebe, E.T., et al. "pHBMT1, a BAHD-family monolignol acyltransferase, mediates lignin acylation in poplar." Plant Physiology 188, 1014-1027+ (2022). [DOI: 10.1093/plphys/kiab546]
2022
del Río, J.C., Rencoret, J., Gutiérrez, A., Kim, H. & Ralph, J. "Unconventional lignin monomers—extension of the lignin paradigm." in Advances in Botanical Research. vol. 104 1-39+ (Elsevier, 2022). [DOI: 10.1016/bs.abr.2022.02.001]
2022
Donohue, T.J. "Editorial overview: microbial activities powering society." Current Opinion in Microbiology 67, 102144+ (2022). [DOI: 10.1016/j.mib.2022.102144]
2022
Edwards, M.R., Holloway, T., Pierce, B., Blank, L., Broddle, M., Choi, E., Duncan, B.N., Esparza, A., Falchetta, G., Fritz, M., et al. "Satellite data applications for sustainable energy transitions." Frontiers in Sustainability 3, 910924+ (2022). [DOI: 10.3389/frsus.2022.910924]
2022
Elder, T., del Río, J.C., Ralph, J., Rencoret, J. & Kim, H. "Density functional theory study on the coupling and reactions of diferuloylputrescine as a lignin monomer." Phytochemistry 197, 113122+ (2022). [DOI: 10.1016/j.phytochem.2022.113122]