Publications

When it comes to interdisciplinary collaboration, the titles of GLBRC publications speak for themselves. Each new year of operation has seen more publications from multiple labs that span our research themes, accelerating the Center's production of the basic research that generates technology to convert cellulosic biomass to advanced biofuels and bioproducts.

Year	Publication	Keywords
2018	Spiesman BJ, Kummel H, Jackson RD (2018) Carbon storage potential increases with increasing ratio of C4 to C3 grass cover and soil productivity in restored tallgrass prairies. Oecologia 186: 565-576+. doi: 10.1007/s00442-017-4036-8 DOI Google Scholar	Sustainability
2018	Li N, Li Y, Yoo CG, Yang X, Lin X, Ralph J, Pan X (2018) An uncondensed lignin depolymerized in the solid state and isolated from lignocellulosic biomass: a mechanistic study. Green Chemistry 20: 4224-4235+. doi: 10.1039/C8GC00953H DOI Google Scholar	Feedstocks
2018	Haslun JA, Ostrom NE, Hegg EL, Ostrom PH (2018) Estimation of isotope variation of N2O during denitrification by Pseudomonas aureofaciens and Pseudomonas chlororaphis: implications for N2O source apportionment. Biogeosciences 15: 3873–3882+. doi: 10.5194/bg-15-3873-2018 DOI Google Scholar	Deconstruction
2018	Yang Y, Benning C (2018) Functions of triacylglycerols during plant development and stress. Current Opinion in Biotechnology 49: 191-198+. doi: 10.1016/j.copbio.2017.09.003 DOI Google Scholar	Feedstocks
2018	Walker TW, Chew AK, Li H, Demir B, Zhang C, Huber GW, Van Lehn RC, Dumesic JA (2018) Universal kinetic solvent effects in acid-catalyzed reactions of biomass-derived oxygenates. Energy and Environmental Science 11: 617-628+. doi: 10.1039/C7EE03432F DOI Google Scholar	Conversion
2018	Ng RTL, Kurniawan D, Wang H, Mariska B, Wu W, Maravelias CT (2018) Integrated framework for designing spatially explicit biofuel supply chains. Applied Energy 216: 116-131+. doi: 10.1016/j.apenergy.2018.02.077 DOI Google Scholar	Deconstruction
2018	Abraha M, Gelfand I, Hamilton SK, Chen J, Robertson P (2018) Legacy effects of land use on soil nitrous oxide emissions in annual crop and perennial grassland ecosystems. Ecological Applications 28: 1362-1369+. doi: 10.1002/eap.1745 DOI Google Scholar	Sustainability
2018	Rodriguez-R LM, Gunturu S, Tiedje JM, Cole JR, Konstantinidis KT (2018) Nonpareil 3: fast estimation of metagenomic coverage and sequence diversity. mSystems. doi: 10.1128/mSystems.00039-18 DOI Google Scholar	Sustainability
2018	de Souza WR, Martins PK, Freeman J, Pellny TK, Michaelson LV, Sampaio BL, Vinecky F, Ribeiro AP, da Cunha BADB, Kobayashi AK, et al (2018) Suppression of a single BAHD gene in Setaria viridis causes large, stable decreases in cell wall feruloylation and increases biomass digestibility. New Phytologist 218: 81-93+. doi: 10.1111/nph.14970 DOI Google Scholar	Feedstocks
2018	Kravchenko AN, Guber AK, Quigley MY, Koestel J, Gandhi H, Ostrom NE (2018) X-ray computed tomography to predict soil N2O production via bacterial denitrification and N2O emission in contrasting bioenergy cropping systems. Global Change Biology – Bioenergy. doi: 10.1111/gcbb.12552 DOI Google Scholar	Sustainability
2018	Sprunger CD, Robertson P (2018) Early accumulation of active fraction soil carbon in newly established cellulosic biofuel systems. Geoderma 318: 42-51+. doi: 10.1016/j.geoderma.2017.11.040 DOI Google Scholar	Sustainability
2018	Li Y, Shuai L, Kim H, Motagamwala AH, Mobley JK, Yue F, Tobimatsu Y, Havkin-Frenkel D, Chen F, Dixon RA, et al (2018) An “ideal lignin” facilitates full biomass utilization. Science Advances. doi: 10.1126/sciadv.aau2968 DOI Google Scholar	Feedstocks
2018	Hebert AS, Prasad S, Belford MW, Bailey DJ, McAlister GC, Abbatiello SE, Huguet R, Wouters ER, Dunyach J-J, Brademan DR, et al (2018) Comprehensive single-shot proteomics with FAIMS on a hybrid orbitrap mass spectrometer. Analytical Chemistry 90: 9529-9537+. doi: 10.1021/acs.analchem.8b02233 DOI Google Scholar
2018	Wang JP, Matthews ML, Williams CM, Shi R, Yang C, Tunlaya-Anukit S, Chen H-C, Li Q, Liu J, Lin C-Y, et al (2018) Improving wood properties for wood utilization through multi-omics integration in lignin biosynthesis. Nature Communications 9: 1579+. doi: 10.1038/s41467-018-03863-z DOI Google Scholar	Feedstocks
2018	Tsuji Y, Takata N, Sakamoto S, Nakagawa-Izumi A, Taniguchi T, Ralph J, Mitsuda N, Kajita S (2018) Change in lignin structure, but not in lignin content, in transgenic poplar overexpressing the rice master regulator of secondary cell wall biosynthesis. Physiologia Plantarum 163: 170-182+. doi: 10.1111/ppl.12684 DOI Google Scholar	Feedstocks
2018	Abraha M, Hamilton SK, Chen J, Robertson P (2018) Ecosystem carbon exchange on conversion of Conservation Reserve Program grasslands to annual and perennial cropping systems. Agricultural and Forest Meteorology 253-254: 151-160+. doi: 10.1016/j.agrformet.2018.02.016 DOI Google Scholar	Sustainability
2018	Roley SS, Duncan DS, Liang D, Garoutte A, Jackson RD, Tiedje JM, Robertson P (2018) Associative nitrogen fixation (ANF) in switchgrass (Panicum virgatum) across a nitrogen input gradient. PLOS ONE. doi: 10.1371/journal.pone.0197320 DOI Google Scholar	Sustainability
2018	del Rio JC, Rencoret J, Gutiérrez A, Kim H, Ralph J (2018) Structural characterization of lignin from maize ( Zea mays L.) fibers: evidence for diferuloylputrescine incorporated into the lignin polymer in maize kernels. Journal of Agricultural and Food Chemistry 66: 4402-4413+. doi: 10.1021/acs.jafc.8b00880 DOI Google Scholar	Feedstocks
2018	Kuang MC, Kominek J, Alexander WG, Cheng J-F, Wrobel RL, Hittinger CT (2018) Repeated cis-regulatory tuning of a metabolic bottleneck gene during evolution. Molecular Biology and Evolution 35: 1968-1981+. doi: 10.1093/molbev/msy102 DOI Google Scholar	Conversion
2018	Stanton CL, Reinhard CT, Kasting JF, Ostrom NE, Haslun JA, Lyons TW, Glass JB (2018) Nitrous oxide from chemodenitrification: a possible missing link in the Proterozoic greenhouse and the evolution of aerobic respiration. Geobiology. doi: 10.1111/gbi.12311 DOI Google Scholar
2018	Lomax A, Woods DP, Dong Y, e F ed eric B, Rong Y, Mayer KS, Zhong X, Amasino RM (2018) An ortholog of CURLY LEAF/ENHANCER OF ZESTE like-1 is required for proper flowering in Brachypodium distachyon. The Plant Journal 93: 871-882+. doi: 10.1111/tpj.13815 DOI Google Scholar	Feedstocks
2018	Higgins DA, Young MK, Tremaine M, Sardi M, Fletcher JM, Agnew M, Liu L, Dickinson Q, Peris D, Wrobel RL, et al (2018) Natural variation in the multidrug efflux pump SGE1 underlies ionic liquid tolerance in yeast. Genetics 210: 219-234+. doi: 10.1534/genetics.118.301161 DOI Google Scholar	Conversion
2018	Wang K, Guo Q, Froehlich JE, Hersh HL, Zienkiewicz A, Howe GA, Benning C (2018) Two abscisic acid-responsive plastid lipase genes involved in jasmonic acid biosynthesis in Arabidopsis thaliana. The Plant Cell 30: 1006-1022+. doi: 10.1105/tpc.18.00250 DOI Google Scholar	Feedstocks
2018	Nutting JE, Rafiee M, Stahl SS (2018) Tetramethylpiperidine N-Oxyl (TEMPO), phthalimide N-Oxyl (PINO), and related N-Oxyl species: electrochemical properties and their use in electrocatalytic reactions. Chemical Reviews 118: 4834-4885+. doi: 10.1021/acs.chemrev.7b00763 DOI Google Scholar	Deconstruction
2018	Bhalla A, Bansal N, Pattathil S, Li M, Shen W, Particka CA, Karlen SD, Phongpreecha T, Semaan RR, Gonzales-Vigil E, et al (2018) Engineered lignin in poplar biomass facilitates Cu-catalyzed alkaline-oxidative pretreatment. ACS Sustainable Chemistry & Engineering 6: 2932-2941+. doi: 10.1021/acssuschemeng.7b02067 DOI Google Scholar	Feedstocks, Deconstruction