Publications

When it comes to interdisciplinary collaboration, the titles of GLBRC publications speak for themselves. Each new year of operation has seen more publications from multiple labs that span our research themes, accelerating the Center's production of the basic research that generates technology to convert cellulosic biomass to advanced biofuels and bioproducts.

Year	Publication	Keywords
2018	Sener C, Motagamwala AH, Alonso DM, Dumesic JA (2018) Enhanced furfural yields from xylose dehydration in the γ-valerolactone/water solvent system at elevated temperatures. ChemSusChem 11: 2321-2331+. doi: 10.1002/cssc.201800730 DOI Google Scholar	Conversion
2018	Gall DL, Kontur WS, Lan W, Kim H, Li Y, Ralph J, Donohue TJ, Noguera DR (2018) In vitro enzymatic depolymerization of lignin with release of syringyl, guaiacyl, and tricin units. Applied and Environmental Microbiology. doi: 10.1128/AEM.02076-17 DOI Google Scholar	Feedstocks, Conversion
2018	Tian L, Chen J, Shao C (2018) Interdependent dynamics of LAI-albedo across the roofing landscapes: Mongolian and Tibetan plateaus. Remote Sensing 10: 1159+. doi: 10.3390/rs10071159 DOI Google Scholar	Sustainability
2018	McKinley BA, Olson SN, Ritter KB, Herb DW, Karlen SD, Lu F, Ralph J, Rooney WL, Mullet JE (2018) Variation in energy sorghum hybrid TX08001 biomass composition and lignin chemistry during development under irrigated and non-irrigated field conditions. PLOS ONE. doi: 10.1371/journal.pone.0195863 DOI Google Scholar	Feedstocks
2018	Cates AC, Jackson RD (2018) Cover crop effects on net ecosystem carbon balance in grain and silage maize. Agronomy Journal 110: 1-9+. doi: 10.2134/agronj2018.01.0045 DOI Google Scholar	Sustainability
2018	Kim S, Zhang X, Dale BE, Reddy AE, Jones CD, Izaurralde RC (2018) EISA (Energy Independence and Security Act) compliant ethanol fuel from corn stover in a depot-based decentralized system. Biofuels, Bioproducts and Biorefining 12: 873-881+. doi: 10.1002/bbb.1899 DOI Google Scholar	Deconstruction
2018	Yan X, Liu J, Kim H, Liu B, Huang X, Yang Z, Lin Y-C, Chen H, Yang C, Wang JP, et al (2018) CAD1 and CCR2 protein complex formation in monolignol biosynthesis in Populus trichocarpa. New Phytologist. doi: 10.1111/nph.15505 DOI Google Scholar	Feedstocks
2018	Pan S, Reed JL (2018) Advances in gap-filling genome-scale metabolic models and model-driven experiments lead to novel metabolic discoveries. Current Opinion in Biotechnology 51: 103-108+. doi: 10.1016/j.copbio.2017.12.012 DOI Google Scholar	Conversion
2018	Evans J, Sanciangco MD, Lau KH, Crisovan E, Barry K, Daum C, Hundley H, Jenkins J, Kennedy M, Kunde-Ramamoorthy G, et al (2018) Extensive genetic diversity is present within North American switchgrass germplasm. The Plant Genome 11: 170055+. doi: 10.3835/plantgenome2017.06.0055 DOI Google Scholar	Feedstocks
2018	Langdon QK, Peris D, Kyle B, Hittinger CT (2018) sppIDer: a species identification tool to investigate hybrid genomes with high-throughput sequencing. Molecular Biology and Evolution. doi: 10.1093/molbev/msy166 DOI Google Scholar	Conversion
2018	Shade A (2018) Understanding microbiome stability in a changing world. mSystems 3: 00157-17+. doi: 10.1128/mSystems.00157-17 DOI Google Scholar	Sustainability
2018	Zhou X, Shen X-X, Hittinger CT, Rokas A (2018) Evaluating fast maximum likelihood-based phylogenetic programs using empirical phylogenomic data sets. Molecular Biology and Evolution 35: 486-503+. doi: 10.1093/molbev/msx302 DOI Google Scholar	Conversion
2018	Gao R, Li Y, Kim H, Mobley JK, Ralph J (2018) Selective oxidation of lignin model compounds. ChemSusChem 11: 2045-2050+. doi: 10.1002/cssc.201800598 DOI Google Scholar
2018	Tian M, Reed JL (2018) Integrating proteomic or transcriptomic data into metabolic models using linear bound flux balance analysis. Bioinformatics. doi: 10.1093/bioinformatics/bty445 DOI Google Scholar	Conversion
2018	Mellmer MA, Sanpitakseree C, Demir B, Bai P, Ma K, Neurock M, Dumesic JA (2018) Solvent-enabled control of reactivity for liquid-phase reactions of biomass-derived compounds. Nature Catalysis 1: 199-207+. doi: 10.1038/s41929-018-0027-3 DOI Google Scholar	Conversion
2018	Cheng H-Y, Masiello CA, Del Valle I, Gao X, Bennett GN, Silberg JJ (2018) Ratiometric gas reporting: a nondisruptive approach to monitor gene expression in soils. ACS Synthetic Biology 7: 903-911+. doi: 10.1021/acssynbio.7b00405 DOI Google Scholar	Sustainability
2018	Kim S-J, Zemelis-Durfee S, Jensen JK, Wilkerson CG, Keegstra K, Brandizzi F (2018) In the grass species Brachypodium distachyon, the production of mixed-linkage (1,3;1,4)-β-glucan (MLG) occurs in the Golgi apparatus. The Plant Journal 93: 1062-1075+. doi: 10.1111/tpj.13830 DOI Google Scholar	Feedstocks
2018	Yang S, Vera JM, Grass J, Savvakis G, Moskvin OV, Yang Y, McIlwain SJ, Lyu Y, Zinonos I, Hebert AS, et al (2018) Complete genome sequence and the expression pattern of plasmids of the model ethanologen Zymomonas mobilis ZM4 and its xylose-utilizing derivatives 8b and 2032. Biotechnology for Biofuels 11: 125+. doi: 10.1186/s13068-018-1116-x DOI Google Scholar	Conversion
2018	Ramstein GP, Evans J, Nandety A, Saha MC, Brummer C, Kaeppler SM, Buell R, Casler MD (2018) Candidate variants for additive and interactive effects on bioenergy traits in switchgrass (Panicum virgatum L.) identified by genome-wide association analyses. The Plant Genome 11: 1-18+. doi: 10.3835/plantgenome2018.01.0002 DOI Google Scholar	Feedstocks
2018	Fan M, Herburger K, Jensen JK, Zemelis-Durfee S, Brandizzi F, Fry SC, Wilkerson CG (2018) A trihelix family transcription factor is associated with key genes in mixed-linkage glucan accumulation. Plant Physiology. doi: 10.1104/pp.18.00978 DOI Google Scholar	Feedstocks
2018	Lapierre C, Voxeur A, Karlen SD, Helm RF, Ralph J (2018) Evaluation of feruloylated and p-coumaroylated arabinosyl units in grass arabinoxylans by acidolysis in dioxane/methanol. Journal of Agricultural and Food Chemistry 66: 5418-5424+. doi: 10.1021/acs.jafc.8b01618 DOI Google Scholar	Feedstocks
2018	Shade A, Dunn RR, Blowes SA, Keil P, Bohannan BJM, Herrmann M, Küsel K, Lennon JT, Sanders NJ, Storch D, et al (2018) Macroecology to unite all life, large and small. Trends in Ecology and Evolution 33: 731-744+. doi: 10.1016/j.tree.2018.08.005 DOI Google Scholar
2018	Gomes EA, Lana UGP, Quensen JF, de Sousa SM, Oliveira CA, Guo J, Guimarães LJM, Tiedje JM (2018) Root-associated microbiome of maize genotypes with contrasting phosphorus use efficiency. Phytobiomes. doi: 10.1094/PBIOMES-03-18-0012-R DOI Google Scholar	Sustainability
2018	Timokhin V, Regner M, Tsuji Y, Grabber J, Ralph J (2018) Synthesis of nepetoidin B. Synlett 29: 1229-1231+. doi: 10.1055/s-0036-1591556 DOI Google Scholar	Feedstocks
2018	Mokomele T, Sousa L da C, Balan V, van Rensburg E, Dale BE, Görgens JF (2018) Ethanol production potential from AFEX™ and steam-exploded sugarcane residues for sugarcane biorefineries. Biotechnology for Biofuels 11: 127+. doi: 10.1186/s13068-018-1130-z DOI Google Scholar	Deconstruction