Publications

When it comes to interdisciplinary collaboration, the titles of GLBRC publications speak for themselves. Each new year of operation has seen more publications from multiple labs that span our research themes, accelerating the Center's production of the basic research that generates technology to convert cellulosic biomass to advanced biofuels and bioproducts.
Year Publication Keywords
2018
Banerjee A, Hamberger B (2018) P450s controlling metabolic bifurcations in plant terpene specialized metabolism. Phytochemistry Reviews 17: 81-111+. doi: 10.1007/s11101-017-9530-4
Feedstocks
2018
Mellmer MA, Sanpitakseree C, Demir B, Bai P, Ma K, Neurock M, Dumesic JA (2018) Solvent-enabled control of reactivity for liquid-phase reactions of biomass-derived compounds. Nature Catalysis 1: 199-207+. doi: 10.1038/s41929-018-0027-3
Conversion
2018
de Souza WR, Martins PK, Freeman J, Pellny TK, Michaelson LV, Sampaio BL, Vinecky F, Ribeiro AP, da Cunha BAD, Kobayashi AK, et al (2018) Suppression of a single BAHD gene in Setaria viridis causes large, stable decreases in cell wall feruloylation and increases biomass digestibility. New Phytologist 218: 81-93+. doi: 10.1111/nph.14970
Feedstocks
2018
Kuang MC, Kominek J, Alexander WG, Cheng J-F, Wrobel RL, Hittinger CT (2018) Repeated cis-regulatory tuning of a metabolic bottleneck gene during evolution. Molecular Biology and Evolution 35: 1968-1981+. doi: 10.1093/molbev/msy102
Conversion
2018
Timokhin V, Regner M, Tsuji Y, Grabber J, Ralph J (2018) Synthesis of nepetoidin B. Synlett 29: 1229-1231+. doi: 10.1055/s-0036-1591556
Feedstocks
2018
Duncan DS, Oates LG, Gelfand I, Millar N, Robertson P, Jackson RD (2018) Environmental factors function as constraints on soil nitrous oxide fluxes in bioenergy feedstock cropping systems. GCB Bioenergy. doi: 10.1111/gcbb.12572
Sustainability
2018
Ostrom NE, Gandhi H, Coplen TB, Toyoda S, Böhlke JK, Brand WA, Casciotti KL, Dyckmans J, Giesemann A, Mohn J, et al (2018) Preliminary assessment of stable nitrogen and oxygen isotopic composition of USGS51 and USGS52 nitrous oxide reference gases and perspectives on calibration needs. Rapid Communications in Mass Spectrometry 32: 1207-1214+. doi: 10.1002/rcm.8157
Deconstruction
2018
Bhalla A, Fasahati P, Particka CA, Assad AE, Stoklosa RJ, Bansal N, Semaan R, Saffron CM, Hodge DB, Hegg EL (2018) Integrated experimental and technoeconomic evaluation of two-stage Cu-catalyzed alkaline–oxidative pretreatment of hybrid poplar. Biotechnology for Biofuels 11: 143+. doi: 10.1186/s13068-018-1124-x
Deconstruction
2018
Wu W, Maravelias CT (2018) Synthesis and techno-economic assessment of microbial-based processes for terpenes production. Biotechnology for Biofuels 11: 294+. doi: 10.1186/s13068-018-1285-7
2018
Peris D, Pérez-Torrado R, Hittinger CT, Barrio E, Querol A (2018) On the origins and industrial applications of Saccharomyces cerevisiae x Saccharomyces kudriavzevii hybrids. Yeast 35: 51-69+. doi: 10.1002/yea.3283
Conversion
2018
Goncalves C, Wisecaver JH, Kominek J, Oom MS, Leandro MJ, Shen X-X, Opulente DA, Zhou X, Peris D, Kurtzman CP, et al (2018) Evidence for loss and reacquisition of alcoholic fermentation in a fructophilic yeast lineage. eLife. doi: 10.7554/eLife.33034
Conversion
2018
Sardi M, Gasch AP (2018) Genetic background effects in quantitative genetics: gene-by-system interactions. Current Genetics 64: 1173–1176+. doi: 10.1007/s00294-018-0835-7
2018
Karlen SD, Free HCA, Padmakshan D, Smith BG, Ralph J, Harris PJ (2018) Commelinid monocotyledon lignins are acylated by p-coumarate. Plant Physiology 177: 513-521+. doi: 10.1104/pp.18.00298
Feedstocks
2018
Spiesman BJ, Bennett A, Isaacs R, Gratton C (2018) Harvesting effects on wild bee communities in bioenergy grasslands depend on nesting guild. Ecological Applications. doi: 10.1002/eap.1828
Sustainability
2018
Meyer JR, Waghmode SB, He J, Gao Y, Hoole D, Sousa L da C, Balan V, Foston MB (2018) Isolation of lignin from Ammonia Fiber Expansion (AFEX) pretreated biorefinery waste. Biomass and Bioenergy 119: 446-455+. doi: 10.1016/j.biombioe.2018.09.017
Deconstruction
2018
del Rio JC, Rencoret J, Gutiérrez A, Kim H, Ralph J (2018) Structural characterization of lignin from maize ( Zea mays L.) fibers: evidence for diferuloylputrescine incorporated into the lignin polymer in maize kernels. Journal of Agricultural and Food Chemistry 66: 4402-4413+. doi: 10.1021/acs.jafc.8b00880
Feedstocks
2018
Kumar R, Bhagia S, Smith MD, Petridis L, Ong RG, Cai CM, Mittal A, Himmel MH, Balan V, Dale BE, et al (2018) Cellulose-hemicellulose interactions at elevated temperatures increase cellulose recalcitrance to biological conversion. Green Chemistry 20: 921-934+. doi: 10.1039/C7GC03518G
Deconstruction
2018
Tornqvist C-E, Taylor M, Jiang Y, Evans J, Buell R, Kaeppler SM, Casler MD (2018) Quantitative Trait Locus mapping for flowering time in a lowland x upland switchgrass pseudo-F2 population. The Plant Genome 11: 1-9+. doi: 10.3835/plantgenome2017.10.0093
Feedstocks
2018
Eizaguirre JI, Peris D, Rodriguez ME, Lopes CA, Rios PDL, Hittinger CT, Libkind D (2018) Phylogeography of the wild Lager-brewing ancestor (Saccharomyces eubayanus) in Patagonia. Environmental Microbiology. doi: 10.1111/1462-2920.14375
Conversion
2018
Pan S, Reed JL (2018) Advances in gap-filling genome-scale metabolic models and model-driven experiments lead to novel metabolic discoveries. Current Opinion in Biotechnology 51: 103-108+. doi: 10.1016/j.copbio.2017.12.012
Conversion
2018
Lomax A, Woods DP, Dong Y, Bouché F, Rong Y, Mayer KS, Zhong X, Amasino RM (2018) An ortholog of CURLY LEAF/ENHANCER OF ZESTE like-1 is required for proper flowering in Brachypodium distachyon. The Plant Journal 93: 871-882+. doi: 10.1111/tpj.13815
Feedstocks
2018
Bottoms S, Dickinson Q, McGee M, Hinchman L, Higbee A, Hebert A, Serate J, Xie D, Zhang Y, Coon JJ, et al (2018) Chemical genomic guided engineering of gamma-valerolactone tolerant yeast. Microbial Cell Factories 17: 5+. doi: 10.1186/s12934-017-0848-9
Conversion
2018
Xue S, Jones D, Sousa L, Piotrowski J, Jin M, Sarks C, Dale BE, Balan V (2018) Water-soluble phenolic compounds produced from extractive ammonia pretreatment exerted binary inhibitory effects on yeast fermentation using synthetic hydrolysate. PLOS ONE. doi: 10.1371/journal.pone.0194012
Deconstruction, Conversion
2018
Gould BA, Palacio-Mejia JD, Jenkins J, Mamidi S, Barry K, Schmutz J, Juenger TE, Lowry DB (2018) Population genomics and climate adaptation of a C4 perennial grass, Panicum hallii (Poaceae). BMC Genomics 19: 792+. doi: 10.1186/s12864-018-5179-7
Sustainability
2018
Sardi M, Krause M, Heilberger J, Gasch AP (2018) Genotype-by-environment-by-environment interactions in the Saccharomyces cerevisiae transcriptomic response to alcohols and anaerobiosis. G3: Genes | Genomes | Genetics 8: 3881-3890.+. doi: 10.1534/g3.118.200677
Conversion