Publications

When it comes to interdisciplinary collaboration, the titles of GLBRC publications speak for themselves. Each new year of operation has seen more publications from multiple labs that span our research themes, accelerating the Center's production of the basic research that generates technology to convert cellulosic biomass to advanced biofuels and bioproducts.

Year	Publication	Keywords
2023	Mechan, M., Mullet, J. & Shade, A. "Phyllosphere exudates select for distinct microbiome members in sorghum epicuticular wax and aerial root mucilage." Phytobiomes Journal DOI: 10.1094/PBIOMES-08-22-0046-FI, (2023). [DOI: 10.1094/pbiomes-08-22-0046-fi] DOI Google Scholar	Sustainability
2023	Mottiar, Y., Smith, R.A., Karlen, S.D., Ralph, J. & Mansfield, S.D. "Evolution of p-coumaroylated lignin in eudicots provides new tools for cell wall engineering." New Phytologist 237,1, 251-264+ (2023). [DOI: 10.1111/nph.18518] DOI Google Scholar
2023	Shade, A. "Microbiome rescue: directing resilience of environmental microbial communities." Current Opinion in Microbiology 72, 102263+ (2023). [DOI: 10.1016/j.mib.2022.102263] DOI Google Scholar
2023	Sumer, Z. & Van Lehn, R.C. "Heuristic computational model for predicting lignin solubility in tailored organic solvents." ACS Sustainable Chemistry & Engineering 11,1, 187-198+ (2023). [DOI: 10.1021/acssuschemeng.2c05199] DOI Google Scholar
2023	Taifan, G.S.P. & Maravelias, C.T. "Integrated membrane material design and system synthesis." Chemical Engineering Science DOI: 10.1016/j.ces.2022.118406, 118406+ (2023). [DOI: 10.1016/j.ces.2022.118406] DOI Google Scholar	Sustainability
2023	Tejera-Nieves, M., Abraha, M., Chen, J., Hamilton, S.K., Robertson, P. & Walker, B.J. "Seasonal decline in leaf photosynthesis in perennial switchgrass explained by sink limitations and water deficit." Frontiers in Plant Science 13, 1023571+ (2023). [DOI: 10.3389/fpls.2022.1023571] DOI Google Scholar
2023	Tilhou, N.W. & Casler, M.D. "Switchgrass sward establishment selection is consistent across multiple environments and fertilization levels." Grassland Research DOI: 10.1002/glr2.12035, (2023). [DOI: 10.1002/glr2.12035] DOI Google Scholar	Sustainability
2023	Barros, K.O., Alvarenga, F.B.M., Magni, G., Souza, G.F.L., Abegg, M.A., Palladino, F., da Silva, S.S., Rodrigues, R.C.L.B., Sato, T.K., Hittinger, C.T., et al. "The Brazilian Amazonian rainforest harbors a high diversity of yeasts associated with rotting wood, including many candidates for new yeast species." Yeast DOI: 10.1002/yea.3837, (2023). [DOI: 10.1002/yea.3837] DOI Google Scholar
2023	Cheng, F., Liu, S., Karlen, S.D., Kim, H., Lu, F., Ralph, J., Ramos, L.M.V., Huber, G.W. & Dumesic, J.A. "Poplar lignin structural changes during extraction in γ-valerolactone (GVL)." Green Chemistry 25, 336-347+ (2023). [DOI: 10.1039/D2GC03446H] DOI Google Scholar
2023	Dong, X., Mayes, H.B., Morreel, K., Katahira, R., Li, Y., Ralph, J., Black, B.A. & Beckham, G.T. "Energy-resolved mass spectrometry as a tool for identification of lignin depolymerization products." ChemSusChem 16,1, (2023). [DOI: 10.1002/cssc.202201441] DOI Google Scholar
2023	Kim, S., Dale, B.E., Martinez-Feria, R., Basso, B., Thelen, K., Maravelias, C.T., Landis, D., Lark, T.J. & Robertson, P. "Global warming intensity of biofuel derived from switchgrass grown on marginal land in Michigan." Global Change Biology - Bioenergy DOI: 10.1111/gcbb.13024, (2023). [DOI: 10.1111/gcbb.13024] DOI Google Scholar
2023	Kim, S.-J. & Brandizzi, F. "Microscopy and immunocytochemistry-based methods to study cell wall biosynthetic enzymes in the Golgi." in Golgi. Methods in Molecular Biology. vol. 2557 39-51+ (Humana, 2023). [DOI: 10.1007/978-1-0716-2639-9_4] DOI Google Scholar
2023	Ko, D.K. & Brandizzi, F. "Coexpression network construction and visualization from transcriptomes underlying ER stress responses." in Plant Proteostasis. Methods in Molecular Biology. vol. 2581 385-401+ (New York, New York, 2023). [DOI: 10.1007/978-1-0716-2784-6_27] DOI Google Scholar
2022	Lark, T.J., Hendricks, N.P., Smith, A., Pates, N., Spawn-Lee, S.A., Bougie, M., Booth, E.G., Kucharik, C.J. & Gibbs, H.K. "Environmental outcomes of the US Renewable Fuel Standard." Proceedings of the National Academy of Sciences of the United States of America 119,9, (2022). [DOI: 10.1073/pnas.2101084119] DOI Google Scholar	Sustainability
2022	Li, J., Maravelias, C.T. & Van Lehn, R.C. "Adaptive conformer sampling for property prediction using the conductor-like screening model for real solvents." Industrial & Engineering Chemistry Research 61,25, 9025-9036+ (2022). [DOI: 10.1021/acs.iecr.2c01163] DOI Google Scholar
2022	Li, X., Sarma, S.J., Sumner, L.W., Jones, D. & Last, R.L. "Switchgrass metabolomics reveals striking genotypic and developmental differences in specialized metabolic phenotypes." Journal of Agricultural and Food Chemistry 70,26, 8010-8023+ (2022). [DOI: 10.1021/acs.jafc.2c01306] DOI Google Scholar	Sustainability
2022	Li, Y., Liu, H., Steenwyk, J.L., Labella, A.L., Harrison, M.-C., Groenewald, M., Zhou, X., Shen, X.-X., Zhao, T., Hittinger, C.T., et al. "Contrasting modes of macro and microsynteny evolution in a eukaryotic subphylum." Current Biology 32, 5335-5343+ (2022). [DOI: 10.1016/j.cub.2022.10.025] DOI Google Scholar
2022	Linz, A.M., Ma, Y., Scholz, S., Noguera, D.R. & Donohue, T.J. "iNovo479: metabolic modeling provides a roadmap to optimize bioproduct yield from deconstructed lignin aromatics by Novosphingobium aromaticivorans." Metabolites 12,4, 366+ (2022). [DOI: 10.3390/metabo12040366] DOI Google Scholar
2022	Liu, Y., Evans, S.E., Friesen, M.L. & Tiemann, L.K. "Root exudates shift how N mineralization and N fixation contribute to the plant-available N supply in low fertility soils." Soil Biology and Biochemistry 165, 108541+ (2022). [DOI: 10.1016/j.soilbio.2021.108541] DOI Google Scholar	Sustainability
2022	Mahon, E.L., de Vries, L., Jang, S.-K., Middar, S., Kim, H., Unda, F., Ralph, J. & Mansfield, S.D. "Exogenous chalcone synthase expression in developing poplar xylem incorporates naringenin into lignins." Plant Physiology 188, 984-996+ (2022). [DOI: 10.1093/plphys/kiab499] DOI Google Scholar
2022	Malmstrom, C.M., Busch, A.K., Cole, E.A., Trebicki, P., Berndardo, P., Brown, A.K., Landis, D.A. & Werling, B.P. "Emerging wild virus of native grass bioenergy feedstock is well established in the Midwestern USA and associated with premature stand senescence." Global Change Biology – Bioenergy 14,4, 463-480+ (2022). [DOI: 10.1111/gcbb.12927] DOI Google Scholar	Sustainability
2022	Martin, T. & Sprunger, C. D. "Sensitive measures of soil health reveal carbon stability across a management intensity and plant biodiversity gradient." Frontiers in Soil Science 2, 917885+ (2022). [DOI: 10.3389/fsoil.2022.917885] DOI Google Scholar	Sustainability
2022	Martinez-Feria, R., Basso, B. & Kim, S. "Boosting climate change mitigation potential of perennial lignocellulosic crops grown on marginal lands." Environmental Research Letters 17, 044004+ (2022). [DOI: 10.1088/1748-9326/ac541b] DOI Google Scholar	Sustainability
2022	McDaniel, E.A., van Steenbrugge, J.J.M., Noguera, D.R., Raaijmakers, J.M., Medema, M.H. & Oyserman, B.O. "TbasCO: trait-based comparative ‘omics identifies ecosystem-level and niche-differentiating adaptations of an engineered microbiome." ISME Communications 2, 111+ (2022). [DOI: 10.1038/s43705-022-00189-2] DOI Google Scholar
2022	McKenzie, A.M., Henry, C., Myers, K.S., Place, M.M. & Keck, J.L. "Identification of genetic interactions with priB links the PriA/PriB DNA replication restart pathway to double-strand DNA break repair in Escherichia coli." G3: Genes \| Genomes \| Genetics 12,12, (2022). [DOI: 10.1093/g3journal/jkac295] DOI Google Scholar