Transcriptomic data sets for Novosphingobium aromaticivorans DSM12444 and a ΔSARO_RS14285 mutant grown in the presence of glucose and either protocatechuic, vanillic, syringic, or 4-coumaric acid
L. Rodriguez-Castro et al. "Transcriptomic data sets for Novosphingobium aromaticivorans DSM12444 and a ΔSARO_RS14285 mutant grown in the presence of glucose and either protocatechuic, vanillic, syringic, or 4-coumaric acid" Microbiology Resource Announcements (2025) 14:e00264-25 [DOI:10.1128/mra.00264-25]
The SARO_RS14285 gene, encoding a transcription factor, was deleted in Novosphingobium aromaticivorans DSM12444. The transcriptomes of the parent and ΔSARO_RS14285 strains were determined when grown in medium containing glucose with or without protocatechuic, vanillic, syringic, or 4-coumaric acid. We present the raw RNA sequencing data obtained from these cultures.
Filtered RNA-seq FASTQ files are available from NCBI SRA, BioProject Accession Number PRJNA1226177). Raw RNA-seq FASTQ files and other sequencing files are available for download from the JGI Data Portal (https://data.jgi.doe.gov/, Proposal ID 510025).
