Publications

When it comes to interdisciplinary collaboration, the titles of GLBRC publications speak for themselves. Each new year of operation has seen more publications from multiple labs that span our research themes, accelerating the Center's production of the basic research that generates technology to convert cellulosic biomass to advanced biofuels and bioproducts.
Year Publication Keywords
2013
Harun, S., Balan, V., Takriff, M.S., Hassan, O., Jahim, J. & Dale, B.E. "Performance of AFEX™ pretreated rice straw as source of fermentable sugars: the influence of particle size." Biotechnology for Biofuels 6, 40+ (2013). [DOI: 10.1186/1754-6834-6-40]
Deconstruction
2013
Hirsch, C.N. & Buell, R. "Tapping the promise of genomics in species with complex, non-model genomes." Annual Review of Plant Biology 64, 89-110+ (2013). [DOI: 10.1146/annurev-arplant-050312-120237]
Feedstocks
2013
Hoagland, K.C., Ruark, M.D., Renz, M.J. & Jackson, R.D. "Agricultural management of switchgrass for fuel quality and thermal energy yield on highly erodible land in the Driftless Area of southwest Wisconsin." BioEnergy Research 6, 1012-1021+ (2013). [DOI: 10.1007/s12155-013-9335-2]
Sustainability
2013
Horn, P.J., James, C.N., Gidda, S.K., Kilaru, A., Dyer, J.M., Mullen, R.T., Ohlrogge, J.B. & Chapman, K.D. "Identification of a new class of lipid droplet-associated proteins in plants." Plant Physiology 162,4, 1926-1936+ (2013). [DOI: 10.​1104/​pp.​113.​222455]
Feedstocks
2013
Imam, S., Noguera, D.R. & Donohue, T.J. "Global insights into energetic and metabolic networks in Rhodobacter sphaeroides." BMC Systems Biology 7,1, 89+ (2013). [DOI: 10.1186/1752-0509-7-89]
Conversion
2013
Jabbour, D., Borrusch, M.S., Banerjee, G. & Walton, J.D. "Enhancement of fermentable sugar yields by α-xylosidase supplementation of commercial cellulases." Biotechnology for Biofuels 6, 58+ (2013). [DOI: 10.1186/1754-6834-6-58]
Deconstruction
2013
Jensen, J.K., Johnson, N. & Wilkerson, C.G. "Discovery of diversity in xylan biosynthetic genes by transcriptional profiling of a heteroxylan containing mucilaginous tissue." Frontiers in Plant Science 4, 183+ (2013). [DOI: 10.3389/fpls.2013.00183]
Feedstocks
2013
Jin, M., Bothfeld, W., Austin, S., Sato, T.K., LaReau, A., Li, H., Foston, M., Gunawan, C., LeDuc, R.D., Quensen, J.F., et al. "Effect of storage conditions on the stability and fermentability of enzymatic lignocellulosic hydrolysate." Bioresource Technology 147, 212-220+ (2013). [DOI: 10.1016/j.biortech.2013.08.018]
Deconstruction, Conversion
2013
Jin, M., Sarks, C., Gunawan, C., Bice, B.D., Simonett, S.P., Narasimhan, R.A., Willis, L.B., Dale, B.E., Balan, V. & Sato, T.K. "Phenotypic selection of a wild Saccharomyces cerevisiae strain for simultaneous saccharification and co-fermentation of AFEX™ pretreated corn stover." Biotechnology for Biofuels 6, 108+ (2013). [DOI: 10.1186/1754-6834-6-108]
Deconstruction, Conversion
2013
Jordan, N., Schulte, L.A., Williams, C., Pitt, D., Slotterback, C.S., Jackson, R., Landis, D., Dale, B., Becker, D. & Rickenbach, M. "Landlabs: an integrated approach to creating agricultural enterprises that meet the triple botom line." Journal of Higher Education Outreach and Engagement 17,4, 175-200+ (2013).
Sustainability
2013
Kang, S., Post, W.M., Nichols, J.A., Wang, D., West, T.O., Bandaru, V. & Izaurralde, R.C. "Marginal lands: concept, assessment and management." Journal of Agricultural Science 5,5, 129-139+ (2013). [DOI: 10.5539/jas.v5n5p129]
Sustainability
2013
Keegstra, K. "Interview with Professor Kenneth Keegstra." Biofuels 4,2, 147-150+ (2013). [DOI: 10.4155/bfs.12.87]
2013
Kim, J., Sen, M. & Maravelias, C.T. "An optimization-based assessment framework for biomass-to-fuel conversion strategies." Energy & Environmental Science 6,4, 1093-1104+ (2013). [DOI: 10.1039/C3EE24243A]
Deconstruction
2013
Kim, W.-C., Kim, J.-Y., Ko, J.-H., Kim, J. & Han, K.-H. "Transcription factor MYB46 is an obligate component of the transcriptional regulatory complex for functional expression of secondary wall-associated cellulose synthases in Arabidopsis thaliana." Journal of Plant Physiology 170,15, 1374-1378+ (2013). [DOI: 10.1016/j.jplph.2013.04.012]
Feedstocks
2013
King, J.S., Ceulemans, R., Albaugh, J.M., Dillen, S.Y., Domec, J.-C., Fichot, R., Fischer, M., Leggett, Z., Sucre, E., Trnka, M., et al. "The challenge of lignocellulosic bioenergy in a water-limited world." BioScience 63,2, 102-117+ (2013). [DOI: 10.1525/bio.2013.63.2]
Sustainability
2013
Klassen, J.L. & Currie, C.R. "ORFcor: identifying and accommodating ORF prediction inconsistencies for phylogenetic analysis." PLOS ONE 8,3, (2013). [DOI: 10.1371/journal.pone.0058387]
Deconstruction
2013
Kraatz, S., Sinistore, J.C. & Reinemann, D.J. "Energy intensity and global warming potential of corn grain ethanol production in Wisconsin (USA)." Food and Energy Security 2,3, 207-219+ (2013). [DOI: 10.1002/fes3.27]
Sustainability
2013
Kucharik, C.J., VanLoocke, A., Lenters, J.D. & Motew, M.M. "Miscanthus establishment and overwintering in the Midwest USA: a regional modeling study of crop residue management on critical minimum soil temperatures." PLOS ONE 8,7, (2013). [DOI: 10.1371/journal.pone.0068847]
Sustainability
2013
Lennen, R.M. & Pfleger, B.F. "Modulating membrane composition alters free fatty acid tolerance in Escherichia coli." PLOS ONE 8,1, (2013). [DOI: 10.1371/journal.pone.0054031.g001]
Conversion
2013
Lennen, R.M. & Pfleger, B.F. "Microbial production of fatty acid-derived fuels and chemicals." Current Opinion in Biotechnology 24,6, 1044-1053+ (2013). [DOI: 10.1016/j.copbio.2013.02.028]
Conversion
2013
Li, Z., Chen, C.H., Hegg, E.L. & Hodge, D.B. "Rapid and effective oxidative pretreatment of woody biomass at mild reaction conditions and low oxidant loadings." Biotechnology for Biofuels 6, 119+ (2013). [DOI: 10.1186/1754-6834-6-119]
Deconstruction
2013
Li, Z., Chen, C.H., Liu, T., Mathrubootham, V., Hegg, E.L. & Hodge, D.B. "Catalysis with CuII(bpy) improves alkaline hydrogen peroxide pretreatment." Biotechnology and Bioengineering 110,4, 1078-1086+ (2013). [DOI: 10.1002/bit.24793]
Deconstruction
2013
Lu, S., Li, Q., Wei, H., Chang, M.-J., Tunlaya-Anukit, S., Kim, H., Liu, J., Song, J., Sun, Y.-H., Yuan, L., et al. "Ptr-miR39a is a negative regulator of laccase genes affecting lignin content in Populus trichocarpa." Proceedings of the National Academy of Sciences of the United States of America 110,26, 10848-10853+ (2013). [DOI: 10.1073/pnas.1308936110]
Feedstocks
2013
Ma, W., Kong, Q., Arondel, V., Kilaru, A., Bates, P.D., Thrower, N.A., Benning, C. & Ohlrogge, J. "WRINKLED1, a ubiquitous regulator in oil accumulating tissues from Arabidopsis embryos to oil palm mesocarp." PLOS ONE 8,7, (2013). [DOI: 10.1371/journal.pone.0068887]
Feedstocks
2013
Mead, D., Drinkwater, C. & Brumm, P.J. "Genomic and enzymatic results show Bacillus cellulosilyticus uses a novel set of LPXTA carbohydrases to hydrolyze polysaccharides." PLOS ONE 8,4, (2013). [DOI: 10.1371/journal.pone.0061131]
Deconstruction