Publications

When it comes to interdisciplinary collaboration, the titles of GLBRC publications speak for themselves. Each new year of operation has seen more publications from multiple labs that span our research themes, accelerating the Center's production of the basic research that generates technology to convert cellulosic biomass to advanced biofuels and bioproducts.

Year	Publication	Keywords
2021	Basso, B., Martinez-Feria, R.A., Rill, L. & Ritchie, J.T. "Contrasting long-term temperature trends reveal minor changes in projected potential evapotranspiration in the US Midwest." Nature Communications 12, 1476+ (2021). [DOI: 10.1038/s41467-021-21763-7] DOI Google Scholar	Sustainability
2021	Basyal, B., Foster, C., Gross, K.L. & Emery, S.M. "Nitrogen fertilizer, arbuscular mycorrhizal fungi, and soil nematodes affect lignin quality and quantity in switchgrass (Panicum virgatum L.)." BioEnergy Research 15, 1033–1041+ (2021). [DOI: 10.1007/s12155-021-10284-2] DOI Google Scholar
2021	Beach, N.K., Myers, K.S., Owen, B.R., Seib, M., Donohue, T.J. & Noguera, D.R. "Exploring the meta-regulon of the CRP/FNR family of global transcriptional regulators in a partial-nitritation anammox microbiome." mSystems 6,5, (2021). [DOI: 10.1128/mSystems.00906-21] DOI Google Scholar
2021	Belanger, M.A., Vizza, C., Robertson, P. & Roley, S.S. "Quantifying and correcting for pre-assay CO2 loss in short-term carbon mineralization assays." SOIL 7, 47-52+ (2021). [DOI: 10.5194/soil-7-47-2021] DOI Google Scholar
2021	Bell-Dereske, L.P. & Evans, S.E. "Contributions of environmental and maternal transmission to the assembly of leaf fungal endophyte communities." Proceedings of the Royal Society B 288,1956, 20210621+ (2021). [DOI: 10.1098/rspb.2021.0621] DOI Google Scholar	Sustainability
2021	Bourbonnais, A., Frey, C., Sun, X., Bristow, L.A., Jayakumas, A., Ostrom, N.E., Casciotti, K.L. & Ward, B.B. "Protocols for assessing transformation rates of nitrous oxide in the water column." Frontiers in Marine Science 8, 611937+ (2021). [DOI: 10.3389/fmars.2021.611937] DOI Google Scholar
2021	Bowsher, A.W., Benucci, G.M.N., Bonito, G. & Shade, A. "Seasonal dynamics of core fungi in the switchgrass phyllosphere, and co-occurrence with leaf bacteria." Phytobiomes Journal 5,1, 60-68+ (2021). [DOI: 10.1094/pbiomes-07-20-0051-r] DOI Google Scholar	Sustainability
2021	Cadez, N., Bellora, N., Ulloa, R., Tome, M., Petkovic, H., Groenewald, M., Hittinger, C.T. & Libkind, D. "Hanseniaspora smithiae sp. nov., a novel apiculate yeast species from Patagonian forests that lacks the typical genomic domestication signatures for fermentative environments." Frontiers in Microbiology 12, 679894+ (2021). [DOI: 10.3389/fmicb.2021.679894] DOI Google Scholar
2021	Cao, Y., Yan, X., Ran, S., Ralph, J., Smith, R.A., Chen, X., Qu, C., Li, J. & Liu, L. "Knockout of the lignin pathway gene BnF5H decreases the S/G lignin compositional ratio and improves S. sclerotiorum resistance in B. napus." Plant, Cell & Environment 45,1, 248-261+ (2021). [DOI: 10.1111/pce.14208] DOI Google Scholar
2021	Cates, A.M., Wills, B.D., Kim, T.N., Landis, D.A., Gratton, C., Read, H.W. & Jackson, R.D. "No evidence of top-down effects by ants on litter decomposition in a temperate grassland." Ecosphere 12,7, (2021). [DOI: 10.1002/ecs2.3638] DOI Google Scholar	Sustainability
2021	Chandrasekar, M., Joshi, L., Krieg, K., Chipkar, S., Burke, E., Debrauske, D.J., Thelen, K.D., Sato, T.K. & Ong, R.G. "A high solids field-to-fuel research pipeline to identify interactions between feedstocks and biofuel production." Biotechnology for Biofuels 14, 179+ (2021). [DOI: 10.1186/s13068-021-02033-6] DOI Google Scholar	Conversion
2021	Chang, H., Bajaj, I., Motagamwala, A.H., Somasundaram, A., Huber, G.W., Maravelias, C.T. & Dumesic, J.A. "Sustainable production of 5-hydroxymethyl furfural from glucose for process integration with high fructose corn syrup infrastructure." Green Chemistry 23,9, 3277-3288+ (2021). [DOI: 10.1039/D1GC00311A] DOI Google Scholar
2021	Chen, J. Biophysical models and applications in ecosystem analysis: ecosystem science and applications (Michigan State University Press, 2021). [DOI: 10.3868/11-00559-001] DOI Google Scholar	Sustainability
2021	Chen, P., Yuan, Y., Li, W., LeDuc, S.D., Lark, T.J., Zhang, X. & Clark, C. "Assessing the impacts of recent crop expansion on water quality in the Missouri river basin using the soil and water assessment tool." Journal of Advances in Modeling Earth Systems 13,6, (2021). [DOI: 10.1029/2020MS002284] DOI Google Scholar	Sustainability
2021	Cho, J.-S., Kim, M.-H., Bae, E.-K., Choi, Y.-I., Jeon, H.-W., Han, K.-H. & Ko, J.-H. "Field evaluation of transgenic hybrid poplars with desirable wood properties and enhanced growth for biofuel production by bicistronic expression of PdGA20ox1 and PtrMYB3 in wood-forming tissue." Biotechnology for Biofuels 14,1, 177+ (2021). [DOI: 10.1186/s13068-021-02029-2] DOI Google Scholar
2021	Chundawat, S.P.S., Nemmaru, B., Hackl, M., Brady, S.K., Hilton, M.A., Johnson, M.M., Chang, S., Lang, M.J., Huh, H., Lee, S.-H., et al. "Molecular origins of reduced activity and binding commitment of processive cellulases and associated carbohydrate-binding proteins to cellulose III." Journal of Biological Chemistry 296, 100431+ (2021). [DOI: 10.1016/j.jbc.2021.100431] DOI Google Scholar	Deconstruction
2021	Crowe, J.D., Hao, P., Pattathil, S., Pan, H., Ding, S.-Y., Hodge, D.B. & Jensen, J.K. "Xylan is critical for proper bundling and alignment of cellulose microfibrils in plant secondary cell walls." Frontiers in Plant Science 12, 737690+ (2021). [DOI: 10.3389/fpls.2021.737690] DOI Google Scholar
2021	Cui, Y., Goes, S.L. & Stahl, S.S. "Sequential oxidation-depolymerization strategies for lignin conversion to low molecular weight aromatic chemicals." Advances in Inorganic Chemistry 77, 99-136+ (2021). [DOI: 10.1016/bs.adioch.2021.02.003] DOI Google Scholar	Conversion
2021	Cusack, S.A., Wang, P., Lotreck, S.G., Moore, B.M., Meng, F., Conner, J.K., Krysan, P.J., Lethi-Shiu, M.D. & Shiu, S.-H. "Predictive models of genetic redundancy in Arabidopsis thaliana." Molecular Biology and Evolution 38,8, 3397–3414+ (2021). [DOI: 10.1093/molbev/msab111] DOI Google Scholar
2021	Dale, R., Oswald, S., Jalihal, A., LaPorte, M.-F., Fletcher, D.M., Hubbard, A., Shiu, S.-H., Nelson, A.D.L. & Bucksch, A. "Overcoming the challenges to enhancing experimental plant biology with computational modeling." Frontiers in Plant Science 12, 687652+ (2021). [DOI: 10.3389/fpls.2021.687652] DOI Google Scholar
2021	Santos-Villalobos, S. de los, Kremer, J.M., Parra-Cota, F.I., Valenzuela-Ruiz, V., Hayano-Kanashiro, C., García-Ortega, L.F., Tiedje, J.M., He, S.Y. & Peña-Cabriales, J.J. "Draft genome sequence of Paraburkholderia sp. strain XV isolated from the rhizosphere of mango (Mangifera indica L.)." Current Research in Microbial Sciences 2, 100055+ (2021). [DOI: 10.1016/j.crmicr.2021.100055] DOI Google Scholar	Sustainability
2021	de Vries, L., Brouckaert, M., Chanoca, A., Kim, H., Regner, M.R., Timokhin, V.I., Sun, Y., De Meester, B., Van Doorsselaere, J., Goeminne, G., et al. "CRISPR-Cas9 editing of CAFFEOYL SHIKIMATE ESTERASE 1 and 2 shows their importance and partial redundancy in lignification in Populus tremula × P. alba." Plant Biotechnology Journal 19,11, 2221-2234+ (2021). [DOI: 10.1111/pbi.13651] DOI Google Scholar
2021	de Vries, L., Guevara-Rozo, S., Cho, M.J., Liu, L.-Y., Renneckar, S. & Mansfield, S.D. "Tailoring renewable materials via plant biotechnology." Biotechnology for Biofuels 14,1, 167+ (2021). [DOI: 10.1186/s13068-021-02010-z] DOI Google Scholar
2021	del Río, J.C., Rencoret, J., Gutiérrez, A., Lan, W., Kim, H. & Ralph, J. "Lignin monomers derived from the flavonoid and hydroxystilbene biosynthetic pathways." in Recent Advances in Polyphenol Research, Volume 7. 177-206+ (Wiley-Blackwell, 2021). [DOI: 10.1002/9781119545958.ch7] DOI Google Scholar	Feedstocks
2021	Demir, B., Kropp, T., Gilcher, E.B., Mavrikakis, M. & Dumesic, J.A. "Effects of water on the kinetics of acetone hydrogenation over Pt and Ru catalysts." Journal of Catalysis 403, 215-227+ (2021). [DOI: 10.1016/j.jcat.2021.03.013] DOI Google Scholar