Publications

When it comes to interdisciplinary collaboration, the titles of GLBRC publications speak for themselves. Each new year of operation has seen more publications from multiple labs that span our research themes, accelerating the Center's production of the basic research that generates technology to convert cellulosic biomass to advanced biofuels and bioproducts.

Year	Publication	Keywords
2016	McDaniel, M.D., Grandy, A.S., Tiemann, L.K. & Weintraub, M.N. "Eleven years of crop diversification alters decomposition dynamics of litter mixtures incubated with soil." Ecosphere 7,8, (2016). [DOI: 10.1002/ecs2.1426] DOI Google Scholar	Sustainability
2016	McIlwain, S.J., Peris, D., Sardi, M., Moskvin, O.V., Zhan, F., Myers, K.S., Riley, N.M., Buzzell, A., Parreiras, L.S., Ong, I.M., et al. "Genome sequence and analysis of a stress-tolerant, wild-derived strain of Saccharomyces cerevisiae used in biofuels research." G3: Genes \| Genomes \| Genetics 6,6, 1757-1766+ (2016). [DOI: 10.1534/g3.116.029389] DOI Google Scholar	Conversion
2016	McKinley, B., Rooney, W., Wilkerson, C. & Mullet, J. "Dynamics of biomass partitioning, stem gene expression, cell wall biosynthesis, and sucrose accumulation during development of Sorghum bicolor." The Plant Journal 88,4, 662-680+ (2016). [DOI: 10.1111/tpj.13269] DOI Google Scholar	Feedstocks
2016	Montella, S., Balan, V., Sousa, L. da C., Gunawan, C., Giacobbe, S., Pepe, O. & Faraco, V. "Saccharification of newspaper waste after ammonia fiber expansion or extractive ammonia." AMB Express 6, 18+ (2016). [DOI: 10.1186/s13568-016-0189-9] DOI Google Scholar	Deconstruction
2016	Motagamwala, A.H., Won, W., Maravelias, C.T. & Dumesic, J.A. "An engineered solvent system for sugar production from lignocellulosic biomass using biomass derived γ-valerolactone." Green Chemistry 18,21, 5756-5763+ (2016). [DOI: 10.1039/C6GC02297A] DOI Google Scholar	Deconstruction, Conversion
2016	Mottiar, Y., Vanholme, R., Boerjan, W., Ralph, J. & Mansfield, S.D. "Designer lignins: harnessing the plasticity of lignification." Current Opinion in Biotechnology 37, 190-200+ (2016). [DOI: 10.1016/j.copbio.2015.10.009] DOI Google Scholar	Feedstocks
2016	Ng, R.T.L. & Maravelias, C.T. "Design of cellulosic ethanol supply chains with regional depots." Industrial and Engineering Chemistry Research 55,12, 3420-3432+ (2016). [DOI: 10.1021/acs.iecr.5b03677] DOI Google Scholar	Deconstruction
2016	Oates, L.G., Duncan, D.S., Gelfand, I., Millar, N., Robertson, P. & Jackson, R.D. "Nitrous oxide emissions during establishment of eight alternative cellulosic bioenergy cropping systems in the North Central United States." Global Change Biology – Bioenergy 8,3, 539-549+ (2016). [DOI: 10.1111/gcbb.12268] DOI Google Scholar	Sustainability
2016	Oates, L.G., Duncan, D.S., Sanford, G.R., Liang, C. & Jackson, R.D. "Bioenergy cropping systems that incorporate native grasses stimulate growth of plant-associated soil microbes in the absence of nitrogen fertilization." Agriculture, Ecosystems & Environment 233, 396-403+ (2016). [DOI: 10.1016/j.agee.2016.09.008] DOI Google Scholar	Sustainability
2016	Ong, R.G., Higbee, A., Bottoms, S., Dickinson, Q., Xie, D., Smith, S.A., Serate, J., Pohlmann, E., Jones, A.D., Coon, J.J., et al. "Inhibition of microbial biofuel production in drought-stressed switchgrass hydrolysate." Biotechnology for Biofuels 9, 237+ (2016). [DOI: 10.1186/s13068-016-0657-0] DOI Google Scholar	Deconstruction, Conversion, Sustainability
2016	Park, S.-H., Ong, R.G. & Sticklen, M. "Strategies for the production of cell wall-deconstructing enzymes in lignocellulosic biomass and their utilization for biofuel production." Plant Biotechnology Journal 14,6, 1329-1344+ (2016). [DOI: 10.1111/pbi.12505] DOI Google Scholar	Deconstruction
2016	Pauly, M. & Keegstra, K. "Biosynthesis of the plant cell wall matrix polysaccharide xyloglucan." Annual Review of Plant Biology 67,1, 235-259+ (2016). [DOI: 10.1146/annurev-arplant-043015-112222] DOI Google Scholar	Feedstocks
2016	Paustian, K., Lehmann, J., Ogle, S., Reay, D., Robertson, P. & Smith, P. "Climate-smart soils." Nature 532,7597, 49-57+ (2016). [DOI: 10.1038/nature17174] DOI Google Scholar	Sustainability
2016	Pereira, J.H., Heins, R.A., Gall, D.L., McAndrew, R.P., Deng, K., Holland, K.C., Donohue, T.J., Noguera, D.R., Simmons, B.A., Sale, K.L., et al. "Structural and biochemical characterization of the early and late enzymes in the lignin β-aryl ether cleavage pathway from Sphingobium sp. SYK-6." The Journal of Biological Chemistry 291,19, 10228-10238+ (2016). [DOI: 10.1074/jbc.M115.700427] DOI Google Scholar	Feedstocks, Conversion
2016	Perez-Pimienta, J.A., Flores-Gómez, C.A., Ruiz, H.A., Sathitsuksanoh, N., Balan, V., Sousa, L. da C., Dale, B.E., Singh, S. & Simmons, B.A. "Evaluation of agave bagasse recalcitrance using AFEX™, autohydrolysis, and ionic liquid pretreatments." Bioresource Technology 211, 216-223+ (2016). [DOI: 10.1016/j.biortech.2016.03.103] DOI Google Scholar	Deconstruction
2016	Peris, D., Langdon, Q., Moriarty, R.V., Sylvester, K., Bontrager, M., Charron, G., LeDuc, J.-B., Landry, C.R., Libkind, D. & Hittinger, C.T. "Complex ancestries of lager-brewing hybrids were shaped by standing variation in the wild yeast Saccharomyces eubayanus." PLOS Genetics 12,7, (2016). [DOI: 10.1371/journal.pgen.1006155] DOI Google Scholar	Conversion
2016	Petrik, D.L., Cass, C.L., Padmakshan, D., Foster, C.E., Vogel, J.P., Karlen, S.D., Ralph, J. & Sedbrook, J.C. "BdCESA7, BdCESA8, and BdPMT utility promoter constructs for targeted expression to secondary cell-wall-forming cells of grasses." Frontiers in Plant Science 7, 55+ (2016). [DOI: 10.3389/fpls.2016.00055] DOI Google Scholar	Feedstocks
2016	Poovaiah, C.R., Bewg, W.P., Lan, W., Ralph, J. & Coleman, H.D. "Sugarcane transgenics expressing MYB transcription factors show improved glucose release." Biotechnology for Biofuels 9, 143+ (2016). [DOI: 10.1186/s13068-016-0559-1] DOI Google Scholar	Feedstocks
2016	Ramstein, G.P., Evans, J., Kaeppler, S.M., Mitchell, R.B., Vogel, K.P., Buell, R. & Casler, M.D. "Accuracy of genomic prediction in switchgrass (Panicum virgatum L.) improved by accounting for linkage disequilibrium." G3: Genes \| Genomes \| Genetics 6,4, 1049-1062+ (2016). [DOI: 10.1534/g3.115.024950] DOI Google Scholar	Feedstocks
2016	Rencoret, J., del Río, J.C., Nierop, K.G.J., Gutiérrez, A. & Ralph, J. "Rapid Py-GC/MS assessment of the structural alterations of lignins in genetically modified plants." Journal of Analytical and Applied Pyrolysis 121, 155-165+ (2016). [DOI: 10.1016/j.jaap.2016.07.016] DOI Google Scholar	Feedstocks
2016	Riley, R., Haridas, S., Wolfe, K.H., Lopes, M.R., Hittinger, C.T., Goker, M., Salamov, A.A., Wisecaver, J.H., Long, T.M., Calvey, C.H., et al. "Comparative genomics of biotechnologically important yeasts." Proceedings of the National Academy of Sciences of the United States of America 113,35, 9882-9887+ (2016). [DOI: 10.1073/pnas.1603941113] DOI Google Scholar	Conversion
2016	Rinaldi, R., Jastrzebski, R., Clough, M.T., Ralph, J., Kennema, M., Bruijnincx, P.C.A. & Weckhuysen, B.M. "Paving the way for lignin valorisation: Recent advances in bioengineering, biorefining and catalysis." Angewandte Chemie (International Edition) 55,29, 8164-8125+ (2016). [DOI: 10.1002/anie.201510351] DOI Google Scholar	Feedstocks
2016	Rinaldi, R., Jastrzebski, R., Clough, M.T., Ralph, J., Kennema, M., Bruijnincx, P.C.A. & Weckhuysen, B.M. "Wege zur verwertung von lignin: Fortschritte in der biotechnik, der bioraffination und der katalyse." Angewandte Chemie 128,29, 8296-8354+ (2016). [DOI: 10.1002/ange.201510351] DOI Google Scholar	Feedstocks
2016	Ro, I., Sener, C., Stadelman, T.M., Ball, M.R., Venegas, J.M., Burt, S.P., Hermans, I., Dumesic, J.A. & Huber, G.W. "Measurement of intrinsic catalytic activity of Pt monometallic and Pt-MoOx interfacial sites over visible light enhanced PtMoOx/SiO2 catalyst in reverse water gas shift reaction." Journal of Catalysis 344, 784-794+ (2016). [DOI: 10.1016/j.jcat.2016.08.011] DOI Google Scholar	Conversion
2016	Ruan, L., Bhardwaj, A.K., Hamilton, S.K. & Robertson, P. "Nitrogen fertilization challenges the climate benefit of cellulosic biofuels." Environmental Research Letters 11,6, 064007+ (2016). [DOI: 10.1088/1748-9326/11/6/064007] DOI Google Scholar	Sustainability