Publications

When it comes to interdisciplinary collaboration, the titles of GLBRC publications speak for themselves. Each new year of operation has seen more publications from multiple labs that span our research themes, accelerating the Center's production of the basic research that generates technology to convert cellulosic biomass to advanced biofuels and bioproducts.

Year	Publication	Keywords
2022	Sanford, G., Jackson, R.D., Rui, Y. & Kucharik, C.J. "Land use-land cover gradient demonstrates the importance of perennial grasslands with intact soils for building soil carbon in the fertile Mollisols of the North Central US." Geoderma 418, 115854+ (2022). [DOI: 10.1016/j.geoderma.2022.115854] DOI Google Scholar	Sustainability
2022	Scarborough, M.J., Myers, K.S., Fortney, N.W., Ingle, A.T., Donohue, T.J. & Noguera, D.R. "Metagenome-assembled genomes from a microbiome converting xylose to medium-chain carboxylic acids." Microbiology Resource Announcements 11,4, (2022). [DOI: 10.1128/mra.01151-21] DOI Google Scholar
2022	Sciusco, P., Chen, J., Giannico, V., Abraha, M., Lei, C., Shirkey, G., Yuan, J. & Robertson, P. "Albedo-induced global warming impact at multiple temporal scales within an Upper Midwest USA watershed." Land 11,2, 283+ (2022). [DOI: 10.3390/land11020283] DOI Google Scholar	Sustainability
2022	Shirkey, G., John, R., Chen, J., Dahlin, K., Abraha, M., Sciusco, P., Lei, C. & Reed, D.E. "Fine resolution remote sensing spectra improves estimates of gross primary production of croplands." Agricultural and Forest Meteorology 326, 109175+ (2022). [DOI: 10.1016/j.agrformet.2022.109175] DOI Google Scholar
2022	Shuai, G. & Basso, B. "Subfield maize yield prediction improves when in-season crop water deficit is included in remote sensing imagery-based models." Remote Sensing of Environment 272, 112938+ (2022). [DOI: 10.1016/j.rse.2022.112938] DOI Google Scholar	Sustainability
2022	Smith, R.A., Beebe, E.T., Bingman, C.A., Meulen, K.V., Eugene, A., Steiner, A.J., Karlen, S.D., Ralph, J. & Fox, B.G. "Identification and characterization of a set of monocot BAHD monolignol transferases." Plant Physiology 189,1, 37-48+ (2022). [DOI: 10.1093/plphys/kiac035] DOI Google Scholar
2022	Smith, R.A., Lu, F., Muro-Villanueva, F., Cusumano, J.C., Chapple, C. & Ralph, J. "Manipulation of lignin monomer composition combined with the introduction of monolignol conjugate biosynthesis leads to synergistic changes in lignin structure." Plant and Cell Physiology 63,6, 744-754+ (2022). [DOI: 10.1093/pcp/pcac031] DOI Google Scholar
2022	Spurley, W.J., Fisher, K.J., Langdon, Q.K., Buh, K.V., Jarzyna, M., Haase, M.A.B., Sylvester, K., Moriarty, R.V., Rodriguez, D., Sheddan, A., et al. "Substrate, temperature, and geographical patterns among nearly 2000 natural yeast isolates." Yeast 39,1-2, 55-68+ (2022). [DOI: 10.1002/yea.3679] DOI Google Scholar
2022	Steenwyk, J.L., Phillips, M.A., Yang, F., Date, S.S., Graham, T.R., Berman, J., Hittinger, C.T. & Rokas, A. "An orthologous gene coevolution network provides insight into eukaryotic cellular and genomic structure and function." Science Advances 8,18, (2022). [DOI: 10.1126/sciadv.abn0105] DOI Google Scholar
2022	Sumer, Z. & Van Lehn, R.C. "Data-centric development of lignin structure-solubility relationships in deep eutectic solvents using molecular simulations." ACS Sustainable Chemistry & Engineering 10,31, 10144-10156+ (2022). [DOI: 10.1021/acssuschemeng.2c01375] DOI Google Scholar
2022	Taifan, G.S.P. & Maravelias, C.T. "Generalized optimization-based synthesis of membrane systems for multicomponent gas mixture separation." Chemical Engineering Science 252, 117482+ (2022). [DOI: 10.1016/j.ces.2022.117482] DOI Google Scholar	Sustainability
2022	Tejera, M., Boersma, N.N., Archontoulis, S.V., Miguez, F.E., VanLoocke, A. & Heaton, E.A. "Photosynthetic decline in aging perennial grass is not fully explained by leaf nitrogen." Journal of Experimental Botany 73,22, 7582-7595+ (2022). [DOI: 10.1093/jxb/erac382] DOI Google Scholar	Sustainability
2022	Tiedge, K., Li, X., Merrill, A.T., Davisson, D., Chen, Y., Yu, P., Tantillo, D.J., Last, R.L. & Zerbe, P. "Comparative transcriptomics and metabolomics reveal specialized metabolite drought stress responses in switchgrass (Panicum virgatum)." New Phytologist 236,4, 1393-1408+ (2022). [DOI: 10.1111/nph.18443] DOI Google Scholar	Sustainability
2022	Tilhou, N.W. & Casler, M. "Genetic correlations between switchgrass performance in sward conditions and surrogate measures." Crop Science 62,4, 1511-1521+ (2022). [DOI: 10.1002/csc2.20767] DOI Google Scholar
2022	Tilhou, N.W. & Casler, M.D. "Surveying grassland islands: the genetics and performance of Appalachian switchgrass (Panicum virgatum L.) collections." Genetic Resources and Crop Evolution 69,3, 1039–1055+ (2022). [DOI: 10.1007/s10722-021-01282-6] DOI Google Scholar
2022	Tilhou, N.W. & Casler, M.D. "Biomass yield improvement in switchgrass through genomic prediction of flowering time." Global Change Biology – Bioenergy 14,9, 1023-1034+ (2022). [DOI: 10.1111/gcbb.12983] DOI Google Scholar
2022	Tilhou, N.W., Kaeppler, S.M. & Casler, M.D. "Strong parallel evidence of selection during switchgrass sward establishment in hybrid and lowland ecotypes." Grassland Research 1,1, 31-42+ (2022). [DOI: 10.1002/glr2.12007] DOI Google Scholar
2022	Trujillo, E.A., Hebert, A.S., Vazquez, J.C.R., Brademan, D.R., Tatli, M., Amador-Noguez, D., Meyer, J.G. & Coon, J.J. "Rapid targeted quantitation of protein overexpression with direct infusion shotgun proteome analysis (DISPA-PRM)." Analytical Chemistry 94,4, 1965-1973+ (2022). [DOI: 10.1021/acs.analchem.1c03243] DOI Google Scholar
2022	Ulbrich, T.C., Rivas-Ubach, A., Tiemann, L.K., Friesen, M.L. & Evans, S.E. "Plant root exudates and rhizosphere bacterial communities shift with neighbor context." Soil Biology and Biochemistry 172, 108753+ (2022). [DOI: 10.1016/j.soilbio.2022.108753] DOI Google Scholar	Sustainability
2022	Umana, G.E., Perez, J.M., Unda, F., Lin, C.-Y., Sener, C., Karlen, S.D., Mansfield, S.D., Eudes, A., Ralph, J., Donohue, T.J., et al. "Biological funneling of phenolics from transgenic plants engineered to express the bacterial 3-dehydroshikimate dehydratase (qsuB) gene." Frontiers in Chemical Engineering 4, 1036084+ (2022). [DOI: 10.3389/fceng.2022.1036084] DOI Google Scholar
2022	Unda, F., Mottiar, Y., Mahon, E.L., Karlen, S.D., Kim, K.H., Loque, D., Eudes, A., Ralph, J. & Mansfield, S.D. "A new approach to zip-lignin: 3,4-dihydroxybenzoate is compatible with lignification." New Phytologist 235,1, 234-246+ (2022). [DOI: 10.1111/nph.18136] DOI Google Scholar
2022	van Dijk, A.D.J., Shiu, S.-H. & de Ridder, D. "Editorial: artificial intelligence and machine learning applications in plant genomics and genetics." Frontiers in Artificial Intelligence 5, 959470+ (2022). [DOI: 10.3389/frai.2022.959470] DOI Google Scholar	Sustainability
2022	Vanacloig-Pedros, E., Fisher, K.J., Liu, L., Debrauske, D.J., Young, M.K.M., Place, M., Hittinger, C.T., Sato, T.K. & Gasch, A.P. "Comparative chemical genomic profiling across plant-based hydrolysate toxins reveals widespread antagonism in fitness contributions." FEMS Yeast Research 21,1, (2022). [DOI: 10.1093/femsyr/foac036] DOI Google Scholar
2022	VanWallendael, A., Benucci, G.M.N., da Costa, P.B., Fraser, L., Sreedasyam, A., Fritschi, F., Juenger, T.E., Lovell, J.T., Bonito, G. & Lowry, D.B. "Host genotype controls ecological change in the leaf fungal microbiome." PLOS Biology 20,8, (2022). [DOI: 10.1371/journal.pbio.3001681] DOI Google Scholar
2022	VanWallendael, A., Lowry, D.B. & Hamilton, J.A. "One hundred years into the study of ecotypes, new advances are being made through large-scale field experiments in perennial plant systems." Current Opinion in Plant Biology 66, 102152+ (2022). [DOI: 10.1016/j.pbi.2021.102152] DOI Google Scholar	Sustainability