Publications

When it comes to interdisciplinary collaboration, the titles of GLBRC publications speak for themselves. Each new year of operation has seen more publications from multiple labs that span our research themes, accelerating the Center's production of the basic research that generates technology to convert cellulosic biomass to advanced biofuels and bioproducts.

Year	Publication	Keywords
2011	Hansey, C.N. & de Leon, N. "Biomass yield and cell wall composition of corn with alternative morphologies planted at variable densities." Crop Science 51, 1005-1015+ (2011). [DOI: 10.2135/cropsci2010.08.0490] DOI Google Scholar	Feedstocks
2011	Hansey, C.N., Johnson, J.M., Kaeppler, S.M. & de Leon, N. "Genetic diversity of a maize association population with restricted phenology." Crop Science 51, 704-715+ (2011). [DOI: 10.2135/cropsci2010.03.0178] DOI Google Scholar	Feedstocks
2011	Held, M.A., Be, E., Zemelis, S., Withers, S., Wilkerson, C. & Brandizzi, F. "CGR3: a golgi-localized protein influencing homogalacturonan methylesterification." Molecular Plant 4,5, 832-44+ (2011). [DOI: 10.1093/mp/ssr012] DOI Google Scholar	Feedstocks
2011	Hoover, S.W., Marner, W.D., Brownson, A.K., Lennen, R.M., Wittkopp, T.M., Yoshitani, un., Zulkifly, S., Graham, L.E., Chaston, S.D., McMahon, K.D., et al. "Bacterial production of free fatty acids from freshwater macroalgal cellulose." Applied Microbiology and Biotechnology 91,2, 435-46+ (2011). [DOI: 10.1007/s00253-011-3344-x] DOI Google Scholar	Conversion
2011	Hu, K., Ellinger, J.J., Chylla, R.A. & Markley, J.L. "Measurement of absolute concentrations of individual compounds in metabolite mixtures by gradient-selective time-zero 1H-13C HSQC with two concentration references and fast maximum likelihood reconstruction analysis." Analytical Chemistry 83,24, 9352-9360+ (2011). [DOI: 10.1021/ac201948f] DOI Google Scholar
2011	Hu, K., Westler, W.M. & Markley, J.L. "Simultaneous quantification and identification of individual chemicals in metabolite mixtures by two-dimensional extrapolated time-zero 1H-13C HSQC (HSQC0)." Journal of the American Chemical Society 133,6, 1662-1665+ (2011). [DOI: 10.1021/ja1095304] DOI Google Scholar
2011	Hu, K., Westler, W.M. & Markley, J.L. "Two-dimensional concurrent HMQC-COSY as an approach for small molecule chemical shift assignment and compound identification." Journal of Biomolecular NMR 49,3-4, 291-296+ (2011). [DOI: 10.1007/s10858-011-9494-4] DOI Google Scholar
2011	Hulcr, J., Adams, A.S., Raffa, K., Hofstetter, R.W., Klepzig, K.D. & Currie, C.R. "Presence and diversity of Streptomyces in Dendroctonus and sympatric bark beetle galleries across North America." Microbial Ecology 61,4, 759-68+ (2011). [DOI: 10.1007/s00248-010-9797-0] DOI Google Scholar	Deconstruction
2011	Hull, S., Arntzen, J., Bleser, C., Crossley, A., Jackson, R., Lobner, E., Paine, L., Radloff, G., Ribic, C., Sample, D., et al. Wisconsin sustainable planting and harvest guidelines for nonforest biomass Report to the Wisconsin Bioenergy Council. 1-88+ http://dnr.wi.gov/org/es/science/wildlife/biomass.htm (2011) Google Scholar	Sustainability
2011	Humpula, J.F., Chundawat, S.P.S., Vismeh, R., Jones, D., Balan, V. & Dale, B.E. "Rapid quantification of major reaction products formed during thermochemical pretreatment of lignocellulosic biomass using GC-MS." Journal of Chromatography B 879, 1018-1022+ (2011). [DOI: 10.1016/j.jchromb.2011.02.049] DOI Google Scholar	Deconstruction
2011	Imam, S., Yilmaz, S., Sohmen, U., Gorzalski, A.S., Reed, J.L., Noguera, D.R. & Donohue, T.J. "iRsp1095: a genome-scale reconstruction of the Rhodobacter sphaeroides metabolic network." BMC Systems Biology 5, 116+ (2011). [DOI: 10.1186/1752-0509-5-116] DOI Google Scholar	Conversion
2011	Iwai, S., Chai, B., Jesus, E. da C., Penton, R., Lee, T.K., Cole, J.R. & Tiedje, J.M. "Gene-targeted-metagenomics (GT-metagenomics) to explore the extensive diversity of genes of interest in microbial communities." in Handbook of Molecular Microbial Ecology I: Metagenomics and Complementary Approaches. 235-244+ (Wiley-Blackwell, 2011). Google Scholar	Sustainability
2011	Jakubowski, A.R., Casler, M.D. & Jackson, R.D. "Has selection for improved agronomic traits made reed canarygrass invasive?" PLOS ONE 6,10, (2011). [DOI: 10.1371/journal.pone.0025757] DOI Google Scholar	Feedstocks, Sustainability
2011	Jakubowski, A.R., Jackson, R.D., Johnson, R.C., Hu, J. & Casler, M.D. "Genetic diversity and population structure of Eurasian populations of reed canarygrass: cytotypes, cultivars, and interspecific hybrids." Crop and Pasture Science 62,11, 982-991+ (2011). [DOI: 10.1071/CP11232] DOI Google Scholar	Feedstocks, Sustainability
2011	Jensen, J.K., Kim, H., Cocuron, J.-C., Orler, R., Ralph, J. & Wilkerson, C.G. "The DUF579 domain containing proteins IRX15 and IRX15-L affect xylan synthesis in Arabidopsis." The Plant Journal 66,3, 387-400+ (2011). [DOI: 10.1111/j.1365-313X.2010.04475.x] DOI Google Scholar	Feedstocks
2011	Jin, M., Balan, V., Gunawan, C. & Dale, B.E. "Consolidated bioprocessing (CBP) performance of Clostridium phytofermentans on AFEX-treated corn stover for ethanol production." Biotechnology and Bioengineering 108,6, 1290-1297+ (2011). [DOI: 10.1002/bit.23059] DOI Google Scholar	Deconstruction
2011	Kallenbach, C. & Grandy, S. "Controls over soil microbial biomass responses to carbon amendments in agricultural systems: a meta-analysis." Agriculture, Ecosystems, and Environment 144,1, 241-252+ (2011). [DOI: 10.1016/j.agee.2011.08.020] DOI Google Scholar	Sustainability
2011	Kim, J., Reed, J.L. & Maravelias, C.T. "Large-scale bi-level strain design approaches and mixed-integer programming solution techniques." PLOS ONE 6,9, (2011). [DOI: 10.1371/journal.pone.0024162] DOI Google Scholar	Conversion
2011	Kim, S. & Dale, B.E. "Indirect land use change for biofuels: testing predictions and improving analytical methodologies." Biomass and Bioenergy 35,7, 3235-3240+ (2011). [DOI: 10.1016/j.biombioe.2011.04.039] DOI Google Scholar	Sustainability
2011	Klassen, J.L., Adams, S.M., Bramhacharya, S., Giles, S.S., Goodwin, L.A., Woyke, T. & Currie, C.R. "Draft genome sequence of Streptomyces sp. strain Wigar10, isolated from a surface-sterilized garlic bulb." Journal of Bacteriology 193,24, 6999-7000+ (2011). [DOI: 10.1128/JB.06257-11] DOI Google Scholar	Deconstruction
2011	Ko, J.-H., Kim, H.-T. & Han, K.-H. "Biotechnological improvement of lignocellulosic feedstock for enhanced biofuel productivity and processing." Plant Biotechnology Reports 5, 1-7+ (2011). [DOI: 10.1007/s11816-010-0159-7] DOI Google Scholar	Feedstocks
2011	Ko, J.-H., Prassinos, C., Keathley, D. & Han, K.-H. "Novel aspects of transcriptional regulation in the winter survival and maintenance mechanism of poplar." Tree Physiology 31,2, 208-255+ (2011). [DOI: 10.1093/treephys/tpq109] DOI Google Scholar	Feedstocks
2011	Kontur, W.S., Ziegelhoffer, E.C., Spero, M.S., Imam, S., Noguera, D.R. & Donohue, T.J. "Pathways involved in reductant distribution during photobiological H2 production by Rhodobacter sphaeroides." Applied and Environmental Microbiology 77,20, 7425-7429+ (2011). [DOI: 10.1128/AEM.05273-11] DOI Google Scholar	Conversion
2011	Kravchenko, A.N. & Robertson, P. "Whole-profile soil carbon stocks: the danger of assuming too much from analyses of too little." Soil Science Society of America Journal 75,1, 235-240+ (2011). [DOI: 10.2136/sssaj2010.0076] DOI Google Scholar	Sustainability
2011	Lennen, R.M., Kruziki, M.A., Kumar, K., Zinkel, R.A., Burnum, K.E., Lipton, M.S., Hoover, S.W., Ranatunga, D.R., Wittkopp, T.M., Marner, W.D., et al. "Membrane stresses induced by overproduction of free fatty acids in Escherichia coli." Applied and Environmental Microbiology 77,22, 8114-8128+ (2011). [DOI: 10.1128/AEM.05421-11] DOI Google Scholar	Conversion