Publications

When it comes to interdisciplinary collaboration, the titles of GLBRC publications speak for themselves. Each new year of operation has seen more publications from multiple labs that span our research themes, accelerating the Center's production of the basic research that generates technology to convert cellulosic biomass to advanced biofuels and bioproducts.
Year Publication Keywords
2022
Martinez-Feria, R., Basso, B. & Kim, S. "Boosting climate change mitigation potential of perennial lignocellulosic crops grown on marginal lands." Environmental Research Letters 17, 044004+ (2022). [DOI: 10.1088/1748-9326/ac541b]
Sustainability
2022
Menefee, D., Scott, R.L., Abraha, M., Alfieri, J.G., Baker, J., Browning, D.M., Chen, J., Gonet, J., Johnson, J.M.F., Miller, G.R., et al. "Unraveling the effects of management and climate on carbon fluxes of U.S. croplands using the USDA Long-Term Agroecosystem (LTAR) network." Agricultural and Forest Meteorology 326, 109154+ (2022). [DOI: 10.1016/j.agrformet.2022.109154]
2022
Moore, B.M., Lee, Y.S., Wang, P., Azodi, C., Grotewold, E. & Shiu, S.-H. "Modeling temporal and hormonal regulation of plant transcriptional response to wounding." The Plant Cell 34,2, 867-888+ (2022). [DOI: 10.1093/plcell/koab287]
2022
Morais, A.R.C., Zhang, J., Dong, H., Otto, W.G., Mokomele, T., Hodge, D., Balan, V., Dale, B.E., Lukasik, R.M. & Sousa, L. da C. "Development of an ammonia pretreatment that creates synergies between biorefineries and advanced biomass logistics models." Green Chemistry 24,11, 4443-4462+ (2022). [DOI: 10.1039/D2GC00488G]
Deconstruction
2022
Moran, J.J., Linley, T.J., Makarem, C.N., Kelly, J.F., Freeburg, E.D.W., Cleary, D.M., Alexander, L. & Kriesel, J.M. "Spectroscopy-based isotopic (δ13C) analysis for high spatial resolution of carbon exchange in the rhizosphere." Rhizosphere 23, 100564+ (2022). [DOI: 10.1016/j.rhisph.2022.100564]
Sustainability
2022
Mottiar, Y., Karlen, S.D., Goacher, R.E., Ralph, J. & Mansfield, S.D. "Metabolic engineering of p-hydroxybenzoate in poplar lignin." Plant Biotechnology Journal DOI: 10.1111/pbi.13935, (2022). [DOI: 10.1111/pbi.13935]
2022
Mottiar, Y. & Mansfield, S.D. "Lignin p-hydroxybenzoylation Is negatively correlated with syringyl units in poplar." Frontiers in Plant Science 13, 938083+ (2022). [DOI: 10.3389/fpls.2022.938083]
2022
Mottiar, Y., Smith, R.A., Karlen, S.D., Ralph, J. & Mansfield, S.D. "Evolution of p-coumaroylated lignin in eudicots provides new tools for cell wall engineering." New Phytologist DOI: 10.1111/nph.18518, (2022). [DOI: 10.1111/nph.18518]
2022
Mozzachiodi, S., Bai, F.-Y., Baldrian, P., Bell, G., Boundy-Mills, K., Buzzini, P., Cadez, N., Cubillos, F.A., Dashko, S., Dimitrov, R., et al. "Yeasts from temperate forests." Yeast 39,1-2, 4-24+ (2022). [DOI: 10.1002/yea.3699]
2022
Muro-Villanueva, F., Kim, H., Ralph, J. & Chapple, C. "H-lignin can be deposited independently of CINNAMYL ALCOHOL DEHYDROGENASE C and D in Arabidopsis." Plant Physiology 189,4, 2015-2028+ (2022). [DOI: 10.1093/plphys/kiac210]
2022
Myers, K.S., Lal, P.B., Noguera, D.R. & Donohue, T.J. "Using genome scale mutant libraries to identify essential genes." in Methods in Molecular Biology. vol. 2377 215-236+ (Humana, 2022). [DOI: 10.1007/978-1-0716-1720-5_12]
2022
Napier, J.D., Grabowski, P.P., Lovell, J.T., Bonnette, J., Mamidi, S., Gomez-Hughes, M.J., VanWallendael, A., Weng, X., Handley, L.H., Kim, M.K., et al. "A generalist–specialist trade-off between switchgrass cytotypes impacts climate adaptation and geographic range." Proceedings of the National Academy of Sciences of the United States of America 119,15, (2022). [DOI: 10.1073/pnas.2118879119]
2022
O'Neill, E.G., Martinez-Feria, R.A., Basso, B. & Maravelias, C.T. "Integrated spatially explicit landscape and cellulosic biofuel supply chain optimization under biomass yield uncertainty." Computers & Chemical Engineering 160, 107724+ (2022). [DOI: 10.1016/j.compchemeng.2022.107724]
Sustainability
2022
Ohnuki, S., Ogawa, I., Itto-Nakama, K., Lu, F., Ranjan, A., Kabbage, M., Gebre, A.A., Yamashita, M., Li, S.C., Yashiroda, Y., et al. "High-throughput platform for yeast morphological profiling predicts the targets of bioactive compounds." npj Systems Biology Applications 8,1, 3+ (2022). [DOI: 10.1038/s41540-022-00212-1]
2022
Padmakshan, D., Timokhin, V.I., Lu, F., Schatz, P.F., Vanholme, R., Boerjan, W. & Ralph, J. "Synthesis of hydroxycinnamoyl shikimates and their role in monolignol biosynthesis." Holzforschung 76,2, 133-144+ (2022). [DOI: 10.1515/hf-2021-0149]
2022
Pan, D., Gelfand, I., Tao, L., Abraha, M., Sun, K., Guo, X., Chen, J., Robertson, P. & Zondlo, M.A. "A new open-path eddy covariance method for nitrous oxide and other trace gases that minimizes temperature corrections." Global Change Biology 28,4, 1446-1457+ (2022). [DOI: 10.1111/gcb.15986]
2022
Perez, J.M., Sener, C., Misra, S., Umana, G.E., Coplien, J., Haak, D., Li, Y., Maravelias, C.T., Karlen, S.D., Ralph, J., et al. "Integrating lignin depolymerization with microbial funneling processes using agronomically relevant feedstocks." Green Chemistry 24,7, 2795-2811+ (2022). [DOI: 10.1039/D1GC03592D]
2022
Ranaweera, T., Brown, B.N.I., Wang, P. & Shiu, S.-H. "Temporal regulation of cold transcriptional response in switchgrass." Frontiers in Plant Science 13, 998400+ (2022). [DOI: 10.3389/fpls.2022.998400]
Sustainability
2022
Rencoret, J., Rosado, M.J., Kim, H., Timokhin, V.I., Gutiérrez, A., Bausch, F., Rosenau, T., Potthast, A., Ralph, J. & del Río, J.C. "Flavonoids naringenin chalcone, naringenin, dihydrotricin, and tricin are lignin monomers in papyrus." Plant Physiology 188,1, 208-219+ (2022). [DOI: 10.1093/plphys/kiab469]
2022
Robertson, P., Hamilton, S.K., Paustian, K. & Smith, P. "Land-based climate solutions for the United States." Global Change Biology 28,16, 4912-4919+ (2022). [DOI: 10.1111/gcb.16267]
2022
Sakai, S. & Rothamer, D. "Relative particle emission tendencies of 2-methyl-3-buten-2-ol–gasoline, isobutanol–gasoline, and ethanol–gasoline blends from premixed combustion in a spark-ignition engine." Fuel 324, 124638+ (2022). [DOI: 10.1016/j.fuel.2022.124638]
2022
Sanford, G., Jackson, R.D., Rui, Y. & Kucharik, C.J. "Land use-land cover gradient demonstrates the importance of perennial grasslands with intact soils for building soil carbon in the fertile Mollisols of the North Central US." Geoderma 418, 115854+ (2022). [DOI: 10.1016/j.geoderma.2022.115854]
Sustainability
2022
Scarborough, M.J., Myers, K.S., Fortney, N.W., Ingle, A.T., Donohue, T.J. & Noguera, D.R. "Metagenome-assembled genomes from a microbiome converting xylose to medium-chain carboxylic acids." Microbiology Resource Announcements 11,4, (2022). [DOI: 10.1128/mra.01151-21]
2022
Sciusco, P., Chen, J., Giannico, V., Abraha, M., Lei, C., Shirkey, G., Yuan, J. & Robertson, P. "Albedo-induced global warming impact at multiple temporal scales within an Upper Midwest USA watershed." Land 11,2, 283+ (2022). [DOI: 10.3390/land11020283]
Sustainability
2022
Shirkey, G., John, R., Chen, J., Dahlin, K., Abraha, M., Sciusco, P., Lei, C. & Reed, D.E. "Fine resolution remote sensing spectra improves estimates of gross primary production of croplands." Agricultural and Forest Meteorology 326, 109175+ (2022). [DOI: 10.1016/j.agrformet.2022.109175]