Publications

When it comes to interdisciplinary collaboration, the titles of GLBRC publications speak for themselves. Each new year of operation has seen more publications from multiple labs that span our research themes, accelerating the Center's production of the basic research that generates technology to convert cellulosic biomass to advanced biofuels and bioproducts.

Year	Publication	Keywords
2018	Mokomele T, Sousa L da C, Balan V, van Rensburg E, Dale BE, Görgens JF (2018) Ethanol production potential from AFEX™ and steam-exploded sugarcane residues for sugarcane biorefineries. Biotechnology for Biofuels 11: 127+. doi: 10.1186/s13068-018-1130-z DOI Google Scholar	Deconstruction
2018	Dou J, Kim H, Li Y, Padmakshan D, Yue F, Ralph J, Vuorinen T (2018) Structural characterization of lignins from willow bark and wood. Journal of Agricultural and Food Chemistry 66: 7294-7300+. doi: 10.1021/acs.jafc.8b02014 DOI Google Scholar
2018	Kim S, Zhang X, Dale BE, Reddy AE, Jones CD, Izaurralde RC (2018) EISA (Energy Independence and Security Act) compliant ethanol fuel from corn stover in a depot-based decentralized system. Biofuels, Bioproducts and Biorefining 12: 873-881+. doi: 10.1002/bbb.1899 DOI Google Scholar	Deconstruction
2018	Spiesman BJ, Kummel H, Jackson RD (2018) Carbon storage potential increases with increasing ratio of C4 to C3 grass cover and soil productivity in restored tallgrass prairies. Oecologia 186: 565-576+. doi: 10.1007/s00442-017-4036-8 DOI Google Scholar	Sustainability
2018	Kutlu T, Guber AK, Rivers ML, Kravchenko AN (2018) Moisture absorption by plant residue in soil. Geoderma 316: 47-55+. doi: 10.1016/j.geoderma.2017.11.043 DOI Google Scholar
2018	Zhou X, Shen X-X, Hittinger CT, Rokas A (2018) Evaluating fast maximum likelihood-based phylogenetic programs using empirical phylogenomic data sets. Molecular Biology and Evolution 35: 486-503+. doi: 10.1093/molbev/msx302 DOI Google Scholar	Conversion
2018	Emery SM, Kinnetz ER, Bell-Dereske L, Stahlheber KA, Gross KL, Pennington D (2018) Low variation in arbuscular mycorrhizal fungal associations and effects on biomass among switchgrass cultivars. Biomass and Bioenergy 119: 503-508+. doi: 10.1016/j.biombioe.2018.10.012 DOI Google Scholar	Sustainability
2018	Ramstein GP, Evans J, Nandety A, Saha MC, Brummer C, Kaeppler SM, Buell R, Casler MD (2018) Candidate variants for additive and interactive effects on bioenergy traits in switchgrass (Panicum virgatum L.) identified by genome-wide association analyses. The Plant Genome 11: 1-18+. doi: 10.3835/plantgenome2018.01.0002 DOI Google Scholar	Feedstocks
2018	Lovell JT, Jenkins J, Lowry DB, Mamidi S, Sreedasyam A, Weng X, Barry K, Bonnette J, Campitelli B, Daum C, et al (2018) The genomic landscape of molecular responses to natural drought stress in Panicum hallii. Nature Communications 9: 5213+. doi: 10.1038/s41467-018-07669-x DOI Google Scholar	Sustainability
2018	Carlos C, Fan H, Currie CR (2018) Substrate shift reveals roles for members of bacterial consortia in degradation of plant cell wall polymers. Frontiers in Microbiology 9: 364+. doi: 10.3389/fmicb.2018.00364 DOI Google Scholar	Deconstruction
2018	Yan X, Liu J, Kim H, Liu B, Huang X, Yang Z, Lin Y-C, Chen H, Yang C, Wang JP, et al (2018) CAD1 and CCR2 protein complex formation in monolignol biosynthesis in Populus trichocarpa. New Phytologist. doi: 10.1111/nph.15505 DOI Google Scholar	Feedstocks
2018	Guber A, Kravchenko A, Razavi BS, Uteau D, Peth S, Blagodatskaya E, Kuzyakov Y (2018) Quantitative soil zymography: mechanisms, processes of substrate and enzyme diffusion in porous media. Soil Biology and Biochemistry 127: 156-167+. doi: 10.1016/j.soilbio.2018.09.030 DOI Google Scholar	Sustainability
2018	Sardi M, Paithane V, Place M, Robinson DE, Hose J, Wohlbach DJ, Gasch AP (2018) Genome-wide association across Saccharomyces cerevisiae strains reveals substantial variation in underlying gene requirements for toxin tolerance. PLOS Genetics. doi: 10.1371/journal.pgen.1007217 DOI Google Scholar	Conversion
2018	Dou J, Xu W, Koivisto JJ, Mobley JK, Padmakshan D, Kögler M, Xu C, Willför S, Ralph J, Vuorinen T (2018) Characteristics of hot water extracts from the bark of cultivated willow (Salix sp.). ACS Sustainable Chemistry & Engineering 6: 5566–5573+. doi: 10.1021/acssuschemeng.8b00498 DOI Google Scholar	Feedstocks
2018	Kim S-J, Zemelis-Durfee S, Jensen JK, Wilkerson CG, Keegstra K, Brandizzi F (2018) In the grass species Brachypodium distachyon, the production of mixed-linkage (1,3;1,4)-β-glucan (MLG) occurs in the Golgi apparatus. The Plant Journal 93: 1062-1075+. doi: 10.1111/tpj.13830 DOI Google Scholar	Feedstocks
2018	Sprunger CD, Robertson P (2018) Early accumulation of active fraction soil carbon in newly established cellulosic biofuel systems. Geoderma 318: 42-51+. doi: 10.1016/j.geoderma.2017.11.040 DOI Google Scholar	Sustainability
2018	Lai Y-S, Stefano G, Zemelis-Durfee S, Ruberti C, Gibbons L, Brandizzi F (2018) Systemic signaling contributes to the unfolded protein response of the plant endoplasmic reticulum. Nature Communications 9: 3918+. doi: 10.1038/s41467-018-06289-9 DOI Google Scholar	Feedstocks
2018	Evans J, Sanciangco MD, Lau KH, Crisovan E, Barry K, Daum C, Hundley H, Jenkins J, Kennedy M, Kunde-Ramamoorthy G, et al (2018) Extensive genetic diversity is present within North American switchgrass germplasm. The Plant Genome 11: 170055+. doi: 10.3835/plantgenome2017.06.0055 DOI Google Scholar	Feedstocks
2018	Regner M, Bartuce A, Padmakshan D, Ralph J, Karlen SD (2018) Reductive cleavage method for quantitation of monolignols and low‐abundance monolignol conjugates. ChemSusChem 11: 1600-1605+. doi: 10.1002/cssc.201800617 DOI Google Scholar	Feedstocks
2018	Kim S, Zhang X, Dale B, Reddy AD, Jones CD, Cronin K, Izaurralde RC, Runge T, Sharara M (2018) Corn stover cannot simultaneously meet both the volume and GHG reduction requirements of the renewable fuel standard. Biofuels, Bioproducts and Biorefining 12: 203-212+. doi: 10.1002/bbb.1830 DOI Google Scholar	Sustainability
2018	MacGilvray ME, Shishkova E, Chasman D, Place M, Gitter A, Coon JJ, Gasch AP (2018) Network inference reveals novel connections in pathways regulating growth and defense in the yeast salt response. PLOS Computational Biololgy. doi: 10.1371/journal.pcbi.1006088 DOI Google Scholar	Conversion
2018	Casto AL, McKinley BA, Yu KMJ, Rooney WL, Mullet JE (2018) Sorghum stem aerenchyma formation is regulated by SbNAC_D during internode development. Plant Direct. doi: 10.1002/pld3.85 DOI Google Scholar	Feedstocks
2018	Yang S, Vera JM, Grass J, Savvakis G, Moskvin OV, Yang Y, McIlwain SJ, Lyu Y, Zinonos I, Hebert AS, et al (2018) Complete genome sequence and the expression pattern of plasmids of the model ethanologen Zymomonas mobilis ZM4 and its xylose-utilizing derivatives 8b and 2032. Biotechnology for Biofuels 11: 125+. doi: 10.1186/s13068-018-1116-x DOI Google Scholar	Conversion
2018	Guber AK, Kravchenko AN, Razavi BS, Blagodatskaya E, Kuzyakov Y (2018) Calibration of 2-D soil zymography for correct analysis of enzyme distribution. European Journal of Soil Science. doi: 10.1111/ejss.12744 DOI Google Scholar	Sustainability
2018	Scarborough MJ, Lawson CE, Hamilton JJ, Donohue TJ, Noguera DR (2018) Metatranscriptomic and thermodynamic insights into medium-chain fatt acid production using an anaerobic microbiome. mSystems. doi: 10.1128/mSystems.00221-18 DOI Google Scholar	Conversion