Publications

When it comes to interdisciplinary collaboration, the titles of GLBRC publications speak for themselves. Each new year of operation has seen more publications from multiple labs that span our research themes, accelerating the Center's production of the basic research that generates technology to convert cellulosic biomass to advanced biofuels and bioproducts.
Year Publication Keywords
2018
Mokomele T, Sousa L da C, Balan V, van Rensburg E, Dale BE, Görgens JF (2018) Ethanol production potential from AFEX™ and steam-exploded sugarcane residues for sugarcane biorefineries. Biotechnology for Biofuels 11: 127+. doi: 10.1186/s13068-018-1130-z
Deconstruction
2018
Dou J, Kim H, Li Y, Padmakshan D, Yue F, Ralph J, Vuorinen T (2018) Structural characterization of lignins from willow bark and wood. Journal of Agricultural and Food Chemistry 66: 7294-7300+. doi: 10.1021/acs.jafc.8b02014
2018
Kim S, Zhang X, Dale BE, Reddy AE, Jones CD, Izaurralde RC (2018) EISA (Energy Independence and Security Act) compliant ethanol fuel from corn stover in a depot-based decentralized system. Biofuels, Bioproducts and Biorefining 12: 873-881+. doi: 10.1002/bbb.1899
Deconstruction
2018
Spiesman BJ, Kummel H, Jackson RD (2018) Carbon storage potential increases with increasing ratio of C4 to C3 grass cover and soil productivity in restored tallgrass prairies. Oecologia 186: 565-576+. doi: 10.1007/s00442-017-4036-8
Sustainability
2018
Kutlu T, Guber AK, Rivers ML, Kravchenko AN (2018) Moisture absorption by plant residue in soil. Geoderma 316: 47-55+. doi: 10.1016/j.geoderma.2017.11.043
2018
Zhou X, Shen X-X, Hittinger CT, Rokas A (2018) Evaluating fast maximum likelihood-based phylogenetic programs using empirical phylogenomic data sets. Molecular Biology and Evolution 35: 486-503+. doi: 10.1093/molbev/msx302
Conversion
2018
Emery SM, Kinnetz ER, Bell-Dereske L, Stahlheber KA, Gross KL, Pennington D (2018) Low variation in arbuscular mycorrhizal fungal associations and effects on biomass among switchgrass cultivars. Biomass and Bioenergy 119: 503-508+. doi: 10.1016/j.biombioe.2018.10.012
Sustainability
2018
Ramstein GP, Evans J, Nandety A, Saha MC, Brummer C, Kaeppler SM, Buell R, Casler MD (2018) Candidate variants for additive and interactive effects on bioenergy traits in switchgrass (Panicum virgatum L.) identified by genome-wide association analyses. The Plant Genome 11: 1-18+. doi: 10.3835/plantgenome2018.01.0002
Feedstocks
2018
Lovell JT, Jenkins J, Lowry DB, Mamidi S, Sreedasyam A, Weng X, Barry K, Bonnette J, Campitelli B, Daum C, et al (2018) The genomic landscape of molecular responses to natural drought stress in Panicum hallii. Nature Communications 9: 5213+. doi: 10.1038/s41467-018-07669-x
Sustainability
2018
Carlos C, Fan H, Currie CR (2018) Substrate shift reveals roles for members of bacterial consortia in degradation of plant cell wall polymers. Frontiers in Microbiology 9: 364+. doi: 10.3389/fmicb.2018.00364
Deconstruction
2018
Yan X, Liu J, Kim H, Liu B, Huang X, Yang Z, Lin Y-C, Chen H, Yang C, Wang JP, et al (2018) CAD1 and CCR2 protein complex formation in monolignol biosynthesis in Populus trichocarpa. New Phytologist. doi: 10.1111/nph.15505
Feedstocks
2018
Guber A, Kravchenko A, Razavi BS, Uteau D, Peth S, Blagodatskaya E, Kuzyakov Y (2018) Quantitative soil zymography: mechanisms, processes of substrate and enzyme diffusion in porous media. Soil Biology and Biochemistry 127: 156-167+. doi: 10.1016/j.soilbio.2018.09.030
Sustainability
2018
Sardi M, Paithane V, Place M, Robinson DE, Hose J, Wohlbach DJ, Gasch AP (2018) Genome-wide association across Saccharomyces cerevisiae strains reveals substantial variation in underlying gene requirements for toxin tolerance. PLOS Genetics. doi: 10.1371/journal.pgen.1007217
Conversion
2018
Dou J, Xu W, Koivisto JJ, Mobley JK, Padmakshan D, Kögler M, Xu C, Willför S, Ralph J, Vuorinen T (2018) Characteristics of hot water extracts from the bark of cultivated willow (Salix sp.). ACS Sustainable Chemistry & Engineering 6: 5566–5573+. doi: 10.1021/acssuschemeng.8b00498
Feedstocks
2018
Kim S-J, Zemelis-Durfee S, Jensen JK, Wilkerson CG, Keegstra K, Brandizzi F (2018) In the grass species Brachypodium distachyon, the production of mixed-linkage (1,3;1,4)-β-glucan (MLG) occurs in the Golgi apparatus. The Plant Journal 93: 1062-1075+. doi: 10.1111/tpj.13830
Feedstocks
2018
Sprunger CD, Robertson P (2018) Early accumulation of active fraction soil carbon in newly established cellulosic biofuel systems. Geoderma 318: 42-51+. doi: 10.1016/j.geoderma.2017.11.040
Sustainability
2018
Lai Y-S, Stefano G, Zemelis-Durfee S, Ruberti C, Gibbons L, Brandizzi F (2018) Systemic signaling contributes to the unfolded protein response of the plant endoplasmic reticulum. Nature Communications 9: 3918+. doi: 10.1038/s41467-018-06289-9
Feedstocks
2018
Evans J, Sanciangco MD, Lau KH, Crisovan E, Barry K, Daum C, Hundley H, Jenkins J, Kennedy M, Kunde-Ramamoorthy G, et al (2018) Extensive genetic diversity is present within North American switchgrass germplasm. The Plant Genome 11: 170055+. doi: 10.3835/plantgenome2017.06.0055
Feedstocks
2018
Regner M, Bartuce A, Padmakshan D, Ralph J, Karlen SD (2018) Reductive cleavage method for quantitation of monolignols and low‐abundance monolignol conjugates. ChemSusChem 11: 1600-1605+. doi: 10.1002/cssc.201800617
Feedstocks
2018
Kim S, Zhang X, Dale B, Reddy AD, Jones CD, Cronin K, Izaurralde RC, Runge T, Sharara M (2018) Corn stover cannot simultaneously meet both the volume and GHG reduction requirements of the renewable fuel standard. Biofuels, Bioproducts and Biorefining 12: 203-212+. doi: 10.1002/bbb.1830
Sustainability
2018
MacGilvray ME, Shishkova E, Chasman D, Place M, Gitter A, Coon JJ, Gasch AP (2018) Network inference reveals novel connections in pathways regulating growth and defense in the yeast salt response. PLOS Computational Biololgy. doi: 10.1371/journal.pcbi.1006088
Conversion
2018
Casto AL, McKinley BA, Yu KMJ, Rooney WL, Mullet JE (2018) Sorghum stem aerenchyma formation is regulated by SbNAC_D during internode development. Plant Direct. doi: 10.1002/pld3.85
Feedstocks
2018
Yang S, Vera JM, Grass J, Savvakis G, Moskvin OV, Yang Y, McIlwain SJ, Lyu Y, Zinonos I, Hebert AS, et al (2018) Complete genome sequence and the expression pattern of plasmids of the model ethanologen Zymomonas mobilis ZM4 and its xylose-utilizing derivatives 8b and 2032. Biotechnology for Biofuels 11: 125+. doi: 10.1186/s13068-018-1116-x
Conversion
2018
Guber AK, Kravchenko AN, Razavi BS, Blagodatskaya E, Kuzyakov Y (2018) Calibration of 2-D soil zymography for correct analysis of enzyme distribution. European Journal of Soil Science. doi: 10.1111/ejss.12744
Sustainability
2018
Scarborough MJ, Lawson CE, Hamilton JJ, Donohue TJ, Noguera DR (2018) Metatranscriptomic and thermodynamic insights into medium-chain fatt acid production using an anaerobic microbiome. mSystems. doi: 10.1128/mSystems.00221-18
Conversion